Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966754

Identifier: 123966754

GI number: 123966754

Start: 1353011

End: 1353577

Strand: Reverse

Name: 123966754

Synonym: P9515_15211

Alternate gene names: NA

Gene position: 1353577-1353011 (Counterclockwise)

Preceding gene: 123966755

Following gene: 123966748

Centisome position: 79.43

GC content: 35.1

Gene sequence:

>567_bases
GTGCTTTCAACAATTCTTACAAAATCATTCAGCAAAGATACAGCTTTATTAATTTTAAGAGTTATAACTGGTACAGTTTT
AATTCATCATGGTTTTGAAAAGCTTGCAAATATTGAAAATTTTGCTGATGCCTTTGTCAGACCTTTACACCTACCTTTCC
CAATATTCTTGTCATACGTGGCCGCATTTTCAGAGATAGGAGGCAGCTGGCTACTAATTCTTGGTTTAGCCACAAGATTT
GGTGCGCTCGCAATCGTTGGCACTATATCAGTAGCCATTTATCATGCGCTCGTCACAGCAGGTTTTAATATTTTTTTATT
AGAACTTTTGCTTTTATATTTTGCCTCTTCAACTTGTATTGCTTTAACCGGTCCTGGGGATTTCTCGATTGATGAGGTTA
TAATTAGAATATTGAGATCTGAATCTGAGGACGAAGAAGTTCAACAGGTGTCTGTAAAATCAAAAGCTAAAATTGGAAAA
TCTACAGTTAAAGATGAAGAGGAACCCAACAAAGGTGGTATTTTTCAATTCTTACAAGCTAATTTACTTTCAGATACATC
TAACTAA

Upstream 100 bases:

>100_bases
TGCCATCTAAGTATATATACTTAATTAAGGATCAGTTTGGTGGTTTAATCCACGATGGATAATGTGGCTAGTTATTTTTA
CTTAAGAAATACGTTTTATA

Downstream 100 bases:

>100_bases
ACCTTAGGATAGAGATTACTAACAAGTTCTTGTCTTCTTCTAATAGAACTTAACCTTTCAAACCTTATTTTTAAAGTTGC
TTCAGTTAAACTTAAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MLSTILTKSFSKDTALLILRVITGTVLIHHGFEKLANIENFADAFVRPLHLPFPIFLSYVAAFSEIGGSWLLILGLATRF
GALAIVGTISVAIYHALVTAGFNIFLLELLLLYFASSTCIALTGPGDFSIDEVIIRILRSESEDEEVQQVSVKSKAKIGK
STVKDEEEPNKGGIFQFLQANLLSDTSN

Sequences:

>Translated_188_residues
MLSTILTKSFSKDTALLILRVITGTVLIHHGFEKLANIENFADAFVRPLHLPFPIFLSYVAAFSEIGGSWLLILGLATRF
GALAIVGTISVAIYHALVTAGFNIFLLELLLLYFASSTCIALTGPGDFSIDEVIIRILRSESEDEEVQQVSVKSKAKIGK
STVKDEEEPNKGGIFQFLQANLLSDTSN
>Mature_188_residues
MLSTILTKSFSKDTALLILRVITGTVLIHHGFEKLANIENFADAFVRPLHLPFPIFLSYVAAFSEIGGSWLLILGLATRF
GALAIVGTISVAIYHALVTAGFNIFLLELLLLYFASSTCIALTGPGDFSIDEVIIRILRSESEDEEVQQVSVKSKAKIGK
STVKDEEEPNKGGIFQFLQANLLSDTSN

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20477; Mature: 20477

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTILTKSFSKDTALLILRVITGTVLIHHGFEKLANIENFADAFVRPLHLPFPIFLSYV
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AAFSEIGGSWLLILGLATRFGALAIVGTISVAIYHALVTAGFNIFLLELLLLYFASSTCI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE
ALTGPGDFSIDEVIIRILRSESEDEEVQQVSVKSKAKIGKSTVKDEEEPNKGGIFQFLQA
EEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
NLLSDTSN
HHHHCCCC
>Mature Secondary Structure
MLSTILTKSFSKDTALLILRVITGTVLIHHGFEKLANIENFADAFVRPLHLPFPIFLSYV
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AAFSEIGGSWLLILGLATRFGALAIVGTISVAIYHALVTAGFNIFLLELLLLYFASSTCI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE
ALTGPGDFSIDEVIIRILRSESEDEEVQQVSVKSKAKIGKSTVKDEEEPNKGGIFQFLQA
EEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
NLLSDTSN
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA