| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966019
Identifier: 123966019
GI number: 123966019
Start: 707510
End: 708430
Strand: Reverse
Name: 123966019
Synonym: P9515_07841
Alternate gene names: NA
Gene position: 708430-707510 (Counterclockwise)
Preceding gene: 123966037
Following gene: 123966017
Centisome position: 41.57
GC content: 28.01
Gene sequence:
>921_bases ATGAAAATTCTTGTAATGGGTGGAACAAGATTTGTTGGAAAGTCTTTGGTAGGTAAGTTGCTCAATCATAAGTATGATAT TGATATCTTTACAAGGGGCAATAAATCTAATCCTGAGAATACAAATTTAATAAAAGGTGATAGAAATAACATTGAAAGTT TACTTAAACTAAAAAATAAAAAATATGATGTGATTTACGATATATCTGGTCGTGAATTAGAACAAACTAAACTTCTTATG GAGATTTTAGCCGATTCTTTCCATAGATATATCTATGTTAGTTCTGCTGGAGTCTATAAAGATAATTATGAATTACCTTT ATCCGAGAATGCTCCCCTAGACCCTAATAGTAGACACAAAGGGAAATTCGAAACTGAAAATTGGTTAGTTAAGCAAAAGA TACCTTTTACAAGTTTTAGACCTACTTATATTTATGGTCCTGGAAATTATAATAAAATTGAAAATTGGTTCTTTGAAAGA CTTTTTCATCTTAAAACAATCCCGATTCCTGCTGATGGTTCCTTGATTACTCAGTTAGGACATGTTTCCGATCTAAGTGA TGTAATGATTAGGTGTTTAGATTTTGAAAAATCAAAAAATAATATATATAACTGCTCTGGAAATAAAGGAGTAACTATCA AGGGTTTAATTTATATGTGTGCAGAGGTTTGTGGTTTAAATAAAAAAGATATTTTTTTAAATAAATTCGATTTTCAAAAA TTAGATACCAAATCAAGAAAGAATTTCCCGATAAGATTAAATCATTATCAAACTGATATATCCAAAATAAAAAATGATTT AAATTGGGAACCAAAATTTGATTTATTGAGAGGTTTGAAAGACAGTTTTATTAATGATTATGATCTTAAAAAAGACGAGG AATTTGATAACAACTCAGATAAAGTTCTTTTTAGCTCTTAA
Upstream 100 bases:
>100_bases AATTTCATTGATTCATCCTTTTCATTAATTACTTCTTAGTAGTACTATTCATTATGTAGTTCTAATTAAGATTACTACTT TTGTTTAATACTTTTGAAAT
Downstream 100 bases:
>100_bases ATAATCTATTAAAGTTATAAGAGATAAAATAAACCCTAGCCAATAAAATATTATTCCTAAATTAGAAAATGAATCTATTT CAAATGGTAGAAAAAATAAT
Product: putative mRNA binding protein
Products: NA
Alternate protein names: Isoflavone Reductase; Nucleotide Sugar Epimerase; DTDP-Glucose 4 6-Dehydratase; Nucleoside-Diphosphate-Sugar Epimerase; UDP-Glucose 4-Epimerase; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NADH Dehydrogenase; Dtdpglucose 4 6-Dehydratase-Like Protein; NAD Dependent Epimerase/Dehydratase Family
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MKILVMGGTRFVGKSLVGKLLNHKYDIDIFTRGNKSNPENTNLIKGDRNNIESLLKLKNKKYDVIYDISGRELEQTKLLM EILADSFHRYIYVSSAGVYKDNYELPLSENAPLDPNSRHKGKFETENWLVKQKIPFTSFRPTYIYGPGNYNKIENWFFER LFHLKTIPIPADGSLITQLGHVSDLSDVMIRCLDFEKSKNNIYNCSGNKGVTIKGLIYMCAEVCGLNKKDIFLNKFDFQK LDTKSRKNFPIRLNHYQTDISKIKNDLNWEPKFDLLRGLKDSFINDYDLKKDEEFDNNSDKVLFSS
Sequences:
>Translated_306_residues MKILVMGGTRFVGKSLVGKLLNHKYDIDIFTRGNKSNPENTNLIKGDRNNIESLLKLKNKKYDVIYDISGRELEQTKLLM EILADSFHRYIYVSSAGVYKDNYELPLSENAPLDPNSRHKGKFETENWLVKQKIPFTSFRPTYIYGPGNYNKIENWFFER LFHLKTIPIPADGSLITQLGHVSDLSDVMIRCLDFEKSKNNIYNCSGNKGVTIKGLIYMCAEVCGLNKKDIFLNKFDFQK LDTKSRKNFPIRLNHYQTDISKIKNDLNWEPKFDLLRGLKDSFINDYDLKKDEEFDNNSDKVLFSS >Mature_306_residues MKILVMGGTRFVGKSLVGKLLNHKYDIDIFTRGNKSNPENTNLIKGDRNNIESLLKLKNKKYDVIYDISGRELEQTKLLM EILADSFHRYIYVSSAGVYKDNYELPLSENAPLDPNSRHKGKFETENWLVKQKIPFTSFRPTYIYGPGNYNKIENWFFER LFHLKTIPIPADGSLITQLGHVSDLSDVMIRCLDFEKSKNNIYNCSGNKGVTIKGLIYMCAEVCGLNKKDIFLNKFDFQK LDTKSRKNFPIRLNHYQTDISKIKNDLNWEPKFDLLRGLKDSFINDYDLKKDEEFDNNSDKVLFSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35558; Mature: 35558
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILVMGGTRFVGKSLVGKLLNHKYDIDIFTRGNKSNPENTNLIKGDRNNIESLLKLKNK CEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCCHHHHHHHHHHCCC KYDVIYDISGRELEQTKLLMEILADSFHRYIYVSSAGVYKDNYELPLSENAPLDPNSRHK CEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEECCCEECCCCCCCCCCCCCCCCCCCCC GKFETENWLVKQKIPFTSFRPTYIYGPGNYNKIENWFFERLFHLKTIPIPADGSLITQLG CCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHH HVSDLSDVMIRCLDFEKSKNNIYNCSGNKGVTIKGLIYMCAEVCGLNKKDIFLNKFDFQK CCCCHHHHHHHHHCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHCCCCCCEEEECCCCHH LDTKSRKNFPIRLNHYQTDISKIKNDLNWEPKFDLLRGLKDSFINDYDLKKDEEFDNNSD HCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC KVLFSS EEEEEC >Mature Secondary Structure MKILVMGGTRFVGKSLVGKLLNHKYDIDIFTRGNKSNPENTNLIKGDRNNIESLLKLKNK CEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCCHHHHHHHHHHCCC KYDVIYDISGRELEQTKLLMEILADSFHRYIYVSSAGVYKDNYELPLSENAPLDPNSRHK CEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEECCCEECCCCCCCCCCCCCCCCCCCCC GKFETENWLVKQKIPFTSFRPTYIYGPGNYNKIENWFFERLFHLKTIPIPADGSLITQLG CCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHH HVSDLSDVMIRCLDFEKSKNNIYNCSGNKGVTIKGLIYMCAEVCGLNKKDIFLNKFDFQK CCCCHHHHHHHHHCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHCCCCCCEEEECCCCHH LDTKSRKNFPIRLNHYQTDISKIKNDLNWEPKFDLLRGLKDSFINDYDLKKDEEFDNNSD HCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC KVLFSS EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA