| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is nuoG [H]
Identifier: 121998538
GI number: 121998538
Start: 1932301
End: 1934688
Strand: Reverse
Name: nuoG [H]
Synonym: Hhal_1759
Alternate gene names: 121998538
Gene position: 1934688-1932301 (Counterclockwise)
Preceding gene: 121998539
Following gene: 121998537
Centisome position: 72.23
GC content: 70.73
Gene sequence:
>2388_bases ATGAGTGCGAACGAGGAGACGGTCACCATCGAGGTCGATGGCTGCTCCATCGAGGCCCGCAAGGGCGAGATGCTGATTCA GGCCACCGACCGTCATGGGATCCACATCCCGCGGTTCTGCTATCACAAGCACCTCTCCGTGGTGGCCAACTGCCGGATGT GCCTGGTCGAGGTCGAGAAGGCGCCCAAGCCGCTGCCGGCCTGCGCGACCTCGGTGGCCGACGGCATGGTGGTGCGCACT GCGTCGGAAACGGCCATCAAGGCGCAGCGCGGCGTCATGGAGTTCCTGCTGATCAACCACCCGCTCGATTGCCCGATCTG TGATCAGGGCGGCGAGTGCGAACTGCAGGACCTCTCCATGGGGTATGGCCGCGGTATTTCACGCTTCACCGAGGGCAAGC GGGCGGTGGCCGACGAAGACCTCGGGCCGCTGGTTGCTACCGAGATGACGCGTTGCATCCACTGCACGCGCTGCGTCCGT TTCCTCGACGAGGTCGCCGGGCAGAAGGAGCTCGGTGGTATGGGCCGTGGGGAGCACACCGAGATCTCGACGTATGTCGA ATCCGGCCTGAACTCGGAGCTCTCGGCCAATGTGGTCGATGTTTGCCCGGTGGGGGCGCTGACCAATAAGCCGTTTCGCT TCCGCGCCCGCCCCTGGGAGTTGCTCAGCTTCCCGGCGGTCTCTCCTCACGACGGGGTGGGGTCGAATCTGGCCCTGCAC ACCCTGCGGGGACGGATCCAGCGCGTCGTGCCGCGTGAGAACGAGGCCGTCAACGAGACGTGGATCGCTGACCGCGACCG CTTCGCCATCGAGGGGGTTGAGCACGCCGATCGGCTCGAACGGCCCATGCTCAAGCGCGACGGCCGTTGGCACGAGGTGC CCTGGGAGACCGCCCTGGATCGCGCCGCGGGCGCCCTGCAGGGCGTCGTCCAGCGCCACGGGACCGATGCGCTCGGTGGA CTGCTGGCGCCGAGCGCGACCCTGGAGGAGCTCTATCTGGCCGCGCGCCTGCTGCGTGGGCTGGGCAGCGGCAACGTCGA CCACCGCCTGCGCGAGGTGGACACCTCCGACCAGGAGCAGGCGCCGCCCTTCCCGTATCTGGGGCAGAGCATCGCCGAGC TGGAGCAGGTGGACGCCGCGCTGCTGGTTGGCGCGTACACCCGACACGAGCAGCCACTGATCCATCACCGCCTGCGCAAG GCGGCCCGGGCGGGCGCTCAGGTCATGGCCCTCAACCCCCGGCGCTTCGACTGGAACCTGCCGCTGGCTGTGGAGCGGGC CGTGGCGCCGGCGCAGCTGGTCGCCGAGCTCGGTGCCGTGGCGGCGGCCCTGGCCGAGGGGTCAGGGCGTGCGCTGCCGG AGGGGCTGGCCGAGGTGGCCGGCCCGGTGACCGACTCCGCCCGGGAGGTTGCGCGCCGGCTGGCTGCGGCCGAGCGGCCC ACGGTCCTGCTCGGCAGCCTGGCGAACAGCCATCCACAGGGTGCAGCGCTGCGGGCATTGGGCGGTTGCATCGCGGAGCT GGCCAACGGTCGTCTGGGGGTCCTCGCCGAGGCTGGCAATACCGCCGGCGGCTGGGTCGCCGGCGCGGTGCCGCACCGTG AGGCCGGCGGTGCGCCGGCACGACCGGCGGGGCGCAGTGCCGACGGCATGCTGCGCGCCGGCCTCAAGGGTTATCTCTTG TTGAATGTGGAGCCGACCCGCGACCTGTGGGATCCGCAAGCCGCCCGGCAGGCGATGGAGCAAGCCGAGGAGGTGGTGGC GGTGACCGCCTTCGCGGATGAACAACTGCGCGCCCAGGCCGACGTCCTGCTGCCGATGGGGGCATTCGGCGAGAGCGCCG GCACCTACGTCAACAACGAAGGCCGCTGGCAAAGTTGCCGCGGGGTCGCCGAGCCTCAGGGTGAGGCACGGCCCGGCTGG CGAATCCTGCGTGCCCTGGGCACGGTTTTGGGGCTGGAGCGTTTCGAGTACAACGACATCGCCGACGTATACGGCGAGCT CGCCGGTCTGTGTCGGGATCTGGAGCCTGGCTCCCGGTATCCGGCCAGGGCGGTGACCGCTCCGGCGTCCCCTGGGCAGG GTCTGGCGCTGGCCGGTGGGGTGCCGATCTATGCCGGCGACCCGCTGGTGCGCCGTTCCTTGCCGCTGCAGCAGGCACCG ATCGCCGGTCGAGCCGAGGTGGTGCTGGCTGCGCAGACGGCCGCCGAACTCGGGTTTTCCGAGGCGCAGCCGCGCTGCGT CCGGGTGCGTTCGGACAGCGGGGTGGCGGAATTGCCGCTGGTCGTCGACGACGCCGTGCCGGCAGGCGTGGCCTGGATCC CCGCCGGGCTGGATGAGCGCGCGGCGCTCGGCGGCCCGTACGGGACCGTCTCGCTGGAAGCGCTCTAG
Upstream 100 bases:
>100_bases GCGAAGCGGCGGCCACGCCTGTGCAGAGTTTCATTCAGCATTTCCGGCACGAGTTCGAACACTACATCGAGCACGGTCGA TCCCCGGTGGAGGCGGCGGC
Downstream 100 bases:
>100_bases GCCGCAGGGCCGCAGAAAAGGACGATCGAGGGCATGTACGAGACACTCTTCTGGCAGTTCGCCAAGATCTGGGCCGTCCT GATCCCGCTGTTCCTGGCCG
Product: NADH dehydrogenase subunit G
Products: NA
Alternate protein names: NADH dehydrogenase I subunit G; NDH-1 subunit G [H]
Number of amino acids: Translated: 795; Mature: 794
Protein sequence:
>795_residues MSANEETVTIEVDGCSIEARKGEMLIQATDRHGIHIPRFCYHKHLSVVANCRMCLVEVEKAPKPLPACATSVADGMVVRT ASETAIKAQRGVMEFLLINHPLDCPICDQGGECELQDLSMGYGRGISRFTEGKRAVADEDLGPLVATEMTRCIHCTRCVR FLDEVAGQKELGGMGRGEHTEISTYVESGLNSELSANVVDVCPVGALTNKPFRFRARPWELLSFPAVSPHDGVGSNLALH TLRGRIQRVVPRENEAVNETWIADRDRFAIEGVEHADRLERPMLKRDGRWHEVPWETALDRAAGALQGVVQRHGTDALGG LLAPSATLEELYLAARLLRGLGSGNVDHRLREVDTSDQEQAPPFPYLGQSIAELEQVDAALLVGAYTRHEQPLIHHRLRK AARAGAQVMALNPRRFDWNLPLAVERAVAPAQLVAELGAVAAALAEGSGRALPEGLAEVAGPVTDSAREVARRLAAAERP TVLLGSLANSHPQGAALRALGGCIAELANGRLGVLAEAGNTAGGWVAGAVPHREAGGAPARPAGRSADGMLRAGLKGYLL LNVEPTRDLWDPQAARQAMEQAEEVVAVTAFADEQLRAQADVLLPMGAFGESAGTYVNNEGRWQSCRGVAEPQGEARPGW RILRALGTVLGLERFEYNDIADVYGELAGLCRDLEPGSRYPARAVTAPASPGQGLALAGGVPIYAGDPLVRRSLPLQQAP IAGRAEVVLAAQTAAELGFSEAQPRCVRVRSDSGVAELPLVVDDAVPAGVAWIPAGLDERAALGGPYGTVSLEAL
Sequences:
>Translated_795_residues MSANEETVTIEVDGCSIEARKGEMLIQATDRHGIHIPRFCYHKHLSVVANCRMCLVEVEKAPKPLPACATSVADGMVVRT ASETAIKAQRGVMEFLLINHPLDCPICDQGGECELQDLSMGYGRGISRFTEGKRAVADEDLGPLVATEMTRCIHCTRCVR FLDEVAGQKELGGMGRGEHTEISTYVESGLNSELSANVVDVCPVGALTNKPFRFRARPWELLSFPAVSPHDGVGSNLALH TLRGRIQRVVPRENEAVNETWIADRDRFAIEGVEHADRLERPMLKRDGRWHEVPWETALDRAAGALQGVVQRHGTDALGG LLAPSATLEELYLAARLLRGLGSGNVDHRLREVDTSDQEQAPPFPYLGQSIAELEQVDAALLVGAYTRHEQPLIHHRLRK AARAGAQVMALNPRRFDWNLPLAVERAVAPAQLVAELGAVAAALAEGSGRALPEGLAEVAGPVTDSAREVARRLAAAERP TVLLGSLANSHPQGAALRALGGCIAELANGRLGVLAEAGNTAGGWVAGAVPHREAGGAPARPAGRSADGMLRAGLKGYLL LNVEPTRDLWDPQAARQAMEQAEEVVAVTAFADEQLRAQADVLLPMGAFGESAGTYVNNEGRWQSCRGVAEPQGEARPGW RILRALGTVLGLERFEYNDIADVYGELAGLCRDLEPGSRYPARAVTAPASPGQGLALAGGVPIYAGDPLVRRSLPLQQAP IAGRAEVVLAAQTAAELGFSEAQPRCVRVRSDSGVAELPLVVDDAVPAGVAWIPAGLDERAALGGPYGTVSLEAL >Mature_794_residues SANEETVTIEVDGCSIEARKGEMLIQATDRHGIHIPRFCYHKHLSVVANCRMCLVEVEKAPKPLPACATSVADGMVVRTA SETAIKAQRGVMEFLLINHPLDCPICDQGGECELQDLSMGYGRGISRFTEGKRAVADEDLGPLVATEMTRCIHCTRCVRF LDEVAGQKELGGMGRGEHTEISTYVESGLNSELSANVVDVCPVGALTNKPFRFRARPWELLSFPAVSPHDGVGSNLALHT LRGRIQRVVPRENEAVNETWIADRDRFAIEGVEHADRLERPMLKRDGRWHEVPWETALDRAAGALQGVVQRHGTDALGGL LAPSATLEELYLAARLLRGLGSGNVDHRLREVDTSDQEQAPPFPYLGQSIAELEQVDAALLVGAYTRHEQPLIHHRLRKA ARAGAQVMALNPRRFDWNLPLAVERAVAPAQLVAELGAVAAALAEGSGRALPEGLAEVAGPVTDSAREVARRLAAAERPT VLLGSLANSHPQGAALRALGGCIAELANGRLGVLAEAGNTAGGWVAGAVPHREAGGAPARPAGRSADGMLRAGLKGYLLL NVEPTRDLWDPQAARQAMEQAEEVVAVTAFADEQLRAQADVLLPMGAFGESAGTYVNNEGRWQSCRGVAEPQGEARPGWR ILRALGTVLGLERFEYNDIADVYGELAGLCRDLEPGSRYPARAVTAPASPGQGLALAGGVPIYAGDPLVRRSLPLQQAPI AGRAEVVLAAQTAAELGFSEAQPRCVRVRSDSGVAELPLVVDDAVPAGVAWIPAGLDERAALGGPYGTVSLEAL
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cyto
COG id: COG1034
COG function: function code C; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI33519475, Length=682, Percent_Identity=37.2434017595308, Blast_Score=403, Evalue=1e-112, Organism=Escherichia coli, GI145693161, Length=781, Percent_Identity=26.5044814340589, Blast_Score=214, Evalue=2e-56, Organism=Escherichia coli, GI3868721, Length=458, Percent_Identity=23.3624454148472, Blast_Score=96, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17565758, Length=689, Percent_Identity=36.8650217706821, Blast_Score=381, Evalue=1e-106, Organism=Caenorhabditis elegans, GI32566231, Length=650, Percent_Identity=37.0769230769231, Blast_Score=362, Evalue=1e-100, Organism=Caenorhabditis elegans, GI193209088, Length=256, Percent_Identity=51.953125, Blast_Score=279, Evalue=3e-75, Organism=Drosophila melanogaster, GI24640559, Length=670, Percent_Identity=38.5074626865672, Blast_Score=400, Evalue=1e-111, Organism=Drosophila melanogaster, GI24640557, Length=670, Percent_Identity=38.5074626865672, Blast_Score=400, Evalue=1e-111,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR001041 - InterPro: IPR006656 - InterPro: IPR000283 - InterPro: IPR010228 - InterPro: IPR019574 - InterPro: IPR015405 [H]
Pfam domain/function: PF09326 DUF1982; PF00111 Fer2; PF00384 Molybdopterin; PF10588 NADH-G_4Fe-4S_3 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 84661; Mature: 84530
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00641 COMPLEX1_75K_1 ; PS00642 COMPLEX1_75K_2 ; PS00643 COMPLEX1_75K_3 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANEETVTIEVDGCSIEARKGEMLIQATDRHGIHIPRFCYHKHLSVVANCRMCLVEVEK CCCCCCEEEEEECCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC APKPLPACATSVADGMVVRTASETAIKAQRGVMEFLLINHPLDCPICDQGGECELQDLSM CCCCCHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCC GYGRGISRFTEGKRAVADEDLGPLVATEMTRCIHCTRCVRFLDEVAGQKELGGMGRGEHT CCCCCHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCH EISTYVESGLNSELSANVVDVCPVGALTNKPFRFRARPWELLSFPAVSPHDGVGSNLALH HHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEECCCCHHHEECCCCCCCCCCCCCHHHH TLRGRIQRVVPRENEAVNETWIADRDRFAIEGVEHADRLERPMLKRDGRWHEVPWETALD HHHHHHHHHCCCCCCCCCHHHCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHH RAAGALQGVVQRHGTDALGGLLAPSATLEELYLAARLLRGLGSGNVDHRLREVDTSDQEQ HHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC APPFPYLGQSIAELEQVDAALLVGAYTRHEQPLIHHRLRKAARAGAQVMALNPRRFDWNL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCC PLAVERAVAPAQLVAELGAVAAALAEGSGRALPEGLAEVAGPVTDSAREVARRLAAAERP CHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCC TVLLGSLANSHPQGAALRALGGCIAELANGRLGVLAEAGNTAGGWVAGAVPHREAGGAPA EEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCC RPAGRSADGMLRAGLKGYLLLNVEPTRDLWDPQAARQAMEQAEEVVAVTAFADEQLRAQA CCCCCCCCHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHH DVLLPMGAFGESAGTYVNNEGRWQSCRGVAEPQGEARPGWRILRALGTVLGLERFEYNDI HEEEECCCCCCCCCCEECCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH ADVYGELAGLCRDLEPGSRYPARAVTAPASPGQGLALAGGVPIYAGDPLVRRSLPLQQAP HHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEECCCCEECCCHHHHHCCCCCCCC IAGRAEVVLAAQTAAELGFSEAQPRCVRVRSDSGVAELPLVVDDAVPAGVAWIPAGLDER CCCCCEEEEEEHHHHHCCCCCCCCCEEEEECCCCCEECCEEEECCCCCCEEEECCCCCCH AALGGPYGTVSLEAL HHCCCCCCCEEEEEC >Mature Secondary Structure SANEETVTIEVDGCSIEARKGEMLIQATDRHGIHIPRFCYHKHLSVVANCRMCLVEVEK CCCCCEEEEEECCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC APKPLPACATSVADGMVVRTASETAIKAQRGVMEFLLINHPLDCPICDQGGECELQDLSM CCCCCHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCC GYGRGISRFTEGKRAVADEDLGPLVATEMTRCIHCTRCVRFLDEVAGQKELGGMGRGEHT CCCCCHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCH EISTYVESGLNSELSANVVDVCPVGALTNKPFRFRARPWELLSFPAVSPHDGVGSNLALH HHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEECCCCHHHEECCCCCCCCCCCCCHHHH TLRGRIQRVVPRENEAVNETWIADRDRFAIEGVEHADRLERPMLKRDGRWHEVPWETALD HHHHHHHHHCCCCCCCCCHHHCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHH RAAGALQGVVQRHGTDALGGLLAPSATLEELYLAARLLRGLGSGNVDHRLREVDTSDQEQ HHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC APPFPYLGQSIAELEQVDAALLVGAYTRHEQPLIHHRLRKAARAGAQVMALNPRRFDWNL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCC PLAVERAVAPAQLVAELGAVAAALAEGSGRALPEGLAEVAGPVTDSAREVARRLAAAERP CHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCC TVLLGSLANSHPQGAALRALGGCIAELANGRLGVLAEAGNTAGGWVAGAVPHREAGGAPA EEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCC RPAGRSADGMLRAGLKGYLLLNVEPTRDLWDPQAARQAMEQAEEVVAVTAFADEQLRAQA CCCCCCCCHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHH DVLLPMGAFGESAGTYVNNEGRWQSCRGVAEPQGEARPGWRILRALGTVLGLERFEYNDI HEEEECCCCCCCCCCEECCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH ADVYGELAGLCRDLEPGSRYPARAVTAPASPGQGLALAGGVPIYAGDPLVRRSLPLQQAP HHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEECCCCEECCCHHHHHCCCCCCCC IAGRAEVVLAAQTAAELGFSEAQPRCVRVRSDSGVAELPLVVDDAVPAGVAWIPAGLDER CCCCCEEEEEEHHHHHCCCCCCCCCEEEEECCCCCEECCEEEECCCCCCEEEECCCCCCH AALGGPYGTVSLEAL HHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA