Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998498

Identifier: 121998498

GI number: 121998498

Start: 1885709

End: 1886497

Strand: Reverse

Name: 121998498

Synonym: Hhal_1719

Alternate gene names: NA

Gene position: 1886497-1885709 (Counterclockwise)

Preceding gene: 121998499

Following gene: 121998495

Centisome position: 70.43

GC content: 75.03

Gene sequence:

>789_bases
ATGACCGAAGGGGCGCCGGCGATCCTCGGTCGGTGCGCCTTCGCCACGGTGCGCGGCTTGACGGTCCACGGTAGTGGCGC
CCTGGCGGGGCTGGCCGGGTTCCCCCAGGCGGTGGAGTTCCGCGGCCGCGGCGGCGACGACCATGCGCTGCCGGCGGCCA
AGGAGCAAGTGGTCTTCCGCCGCGTGGTGCGCTACCAGGATGGCGCCGATCCCGAGCCCGGTGGTCGGCTGGATCTCATC
GGCACGCTGGTCCGCCGCCTCGATGCCAGCCGCCGGGCGGGCTACGCCGGCGCGTGCGTGGCAGTGGCCCACCGCAATCT
AGAGGCCTACGCGACGGCGCTGGACGAAGCGCAGGGGCTGATCCGTCAGGTAGACGAGGTCCTTGCCGAGGGCAGTGCCG
CGCGCTGGTTGCGGGAGGCCGATAGCGGGCGCGGGGCGGGTCGCCGGCGCTTCGGATTCGAGGGGCGTGGCCCCGGTCGC
GTGCTGTGGCTCCACCGCAGCACCGCCGCCGAGGCCGACCCGGAGCTGGTTCCCGAGGCGCTACGCCAGCTGGCCTGGCT
GGATGAGCACGCGCTGACCGGGGTGCTGATCTTCCCGGCGGTACGGCCGGGCTCCCGCGCCGTGGACAGCGGCCTGATCG
CCGGCTGCCGCCGCGCCAAGCAGCAGGAGATCGAGGGCGTCGAGGCTGGCTTCCGCGCCGAGTTCGAGCGCCGCCTGGCG
GAGATCGAGTACGAGTACCAGGCGGCCGCCCGGGCACCGGCGCCACCGGGGCCGCGCGGCGGCGACTAG

Upstream 100 bases:

>100_bases
ACGACGATATCCGCGACATCTTCGCCTGGATCTACGGCCAGTTCGGCGGCGGGCGGATGGGGCCGACCTGGTGGCAGCGG
ATCCTGGAGTGGCTGCGCCT

Downstream 100 bases:

>100_bases
GGCACCACCAGCACCGGGAGTTGCACCGTCTCGATCAGCGAGCGGGTGTTGTGCTCGGCCAGCAGGGCGCTGCGGCGGCT
GATGATCAGCTTGTCCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTEGAPAILGRCAFATVRGLTVHGSGALAGLAGFPQAVEFRGRGGDDHALPAAKEQVVFRRVVRYQDGADPEPGGRLDLI
GTLVRRLDASRRAGYAGACVAVAHRNLEAYATALDEAQGLIRQVDEVLAEGSAARWLREADSGRGAGRRRFGFEGRGPGR
VLWLHRSTAAEADPELVPEALRQLAWLDEHALTGVLIFPAVRPGSRAVDSGLIAGCRRAKQQEIEGVEAGFRAEFERRLA
EIEYEYQAAARAPAPPGPRGGD

Sequences:

>Translated_262_residues
MTEGAPAILGRCAFATVRGLTVHGSGALAGLAGFPQAVEFRGRGGDDHALPAAKEQVVFRRVVRYQDGADPEPGGRLDLI
GTLVRRLDASRRAGYAGACVAVAHRNLEAYATALDEAQGLIRQVDEVLAEGSAARWLREADSGRGAGRRRFGFEGRGPGR
VLWLHRSTAAEADPELVPEALRQLAWLDEHALTGVLIFPAVRPGSRAVDSGLIAGCRRAKQQEIEGVEAGFRAEFERRLA
EIEYEYQAAARAPAPPGPRGGD
>Mature_261_residues
TEGAPAILGRCAFATVRGLTVHGSGALAGLAGFPQAVEFRGRGGDDHALPAAKEQVVFRRVVRYQDGADPEPGGRLDLIG
TLVRRLDASRRAGYAGACVAVAHRNLEAYATALDEAQGLIRQVDEVLAEGSAARWLREADSGRGAGRRRFGFEGRGPGRV
LWLHRSTAAEADPELVPEALRQLAWLDEHALTGVLIFPAVRPGSRAVDSGLIAGCRRAKQQEIEGVEAGFRAEFERRLAE
IEYEYQAAARAPAPPGPRGGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27966; Mature: 27835

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEGAPAILGRCAFATVRGLTVHGSGALAGLAGFPQAVEFRGRGGDDHALPAAKEQVVFR
CCCCCHHHHHHHHHHHHHCEEEECCCCHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHH
RVVRYQDGADPEPGGRLDLIGTLVRRLDASRRAGYAGACVAVAHRNLEAYATALDEAQGL
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IRQVDEVLAEGSAARWLREADSGRGAGRRRFGFEGRGPGRVLWLHRSTAAEADPELVPEA
HHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHH
LRQLAWLDEHALTGVLIFPAVRPGSRAVDSGLIAGCRRAKQQEIEGVEAGFRAEFERRLA
HHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIEYEYQAAARAPAPPGPRGGD
HHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TEGAPAILGRCAFATVRGLTVHGSGALAGLAGFPQAVEFRGRGGDDHALPAAKEQVVFR
CCCCHHHHHHHHHHHHHCEEEECCCCHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHH
RVVRYQDGADPEPGGRLDLIGTLVRRLDASRRAGYAGACVAVAHRNLEAYATALDEAQGL
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IRQVDEVLAEGSAARWLREADSGRGAGRRRFGFEGRGPGRVLWLHRSTAAEADPELVPEA
HHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHH
LRQLAWLDEHALTGVLIFPAVRPGSRAVDSGLIAGCRRAKQQEIEGVEAGFRAEFERRLA
HHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIEYEYQAAARAPAPPGPRGGD
HHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA