Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998499

Identifier: 121998499

GI number: 121998499

Start: 1886494

End: 1887549

Strand: Reverse

Name: 121998499

Synonym: Hhal_1720

Alternate gene names: NA

Gene position: 1887549-1886494 (Counterclockwise)

Preceding gene: 121998500

Following gene: 121998498

Centisome position: 70.47

GC content: 67.99

Gene sequence:

>1056_bases
GTGGTCGAACCCAGGGAGTCACGCTGGCAGTTGCGGCGCTATTACGAGCGCCGACCGGAGCAGGAGCAGCCCGTCACCGA
GGCCGGTGATGAGGGGCCCACCCCGGCACCTTCGCCTTGGCCGTCCCCCGAGGAGCGTCTGGCCGCCGACGAGGAGCCGG
TGCAGCGCGGCGCGCTGCTCGACGACAACATCGACCAGCGCCAGGGCAATTACCTGATCTCCTTCGGCTTCCCGGGGTCC
GGCAAGACCACTTTCCAGTCCTTTCTGGCCTACTACGTCACCCACATCGGCCCCTTCGAGGCCCAGCCGCTCATCACCCC
GGAGGAGAGCGTCCAGGGTTGGGAGCCGATGGCCATCTTCAACGAATGGATGCGCATTTGGGGGCAGGGGCGCTTCCCGC
CGGCGAACCCGGTGGACGAGGGCGACATCCGCGAGCTGAGCTTCCGGGTTCGGCCGCTGCAGGGCGGTGGCGAACCGGTG
GATCTGAGTTTCCTCGAGGCCTCCGGCGAGCTCATGACCCAGGTGGTGGCCGACCGGGTGCGCGACCCGGCCATGATCGA
GACCCTGAGTCGCTACTTCGCCAACGAGCAGCTGCGGTTGATCCTGGTGCTGGTGGTCGATCCCGAGCAAGGCGAAGAGA
ACGACATCCTCTTCCAGAACCTGCTCGCCTTCCTCGATCTGCACTTCCCGTCGCTGCGCGAGCGGACTTCGCTGGCGGTG
CTGGTCTCCAAGCCGGAACAGGCCCTGCAGCGGCTGCAGGAGCGGGACGAGCGCTACCGCCGTCACGAGGAGCTCAGCGC
CGACGCCTGCGAGGCCTTCGTGCAGCGCTTTGCGCCGCGCACCTACCGCATCCTCGACGGCTGGACTCACCAGGATCGGG
TGCAGCTCATGGCCCTGCATCTGGGCACGGTGGCCGACGGCGAGCACGGGCCGCGTCTGCAGGAGCCGGACTACGACGAT
ATCCGCGACATCTTCGCCTGGATCTACGGCCAGTTCGGCGGCGGGCGGATGGGGCCGACCTGGTGGCAGCGGATCCTGGA
GTGGCTGCGCCTATGA

Upstream 100 bases:

>100_bases
GCTGATCTTTGCACCGGCTGCGGCCGGCGCGCGGGGGGGCAGCGCAGCCGGGCGGGGCCGTAATCGGGTGGCCACGCGCT
AGCGGGCAAGGAGGGGAGCA

Downstream 100 bases:

>100_bases
CCGAAGGGGCGCCGGCGATCCTCGGTCGGTGCGCCTTCGCCACGGTGCGCGGCTTGACGGTCCACGGTAGTGGCGCCCTG
GCGGGGCTGGCCGGGTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MVEPRESRWQLRRYYERRPEQEQPVTEAGDEGPTPAPSPWPSPEERLAADEEPVQRGALLDDNIDQRQGNYLISFGFPGS
GKTTFQSFLAYYVTHIGPFEAQPLITPEESVQGWEPMAIFNEWMRIWGQGRFPPANPVDEGDIRELSFRVRPLQGGGEPV
DLSFLEASGELMTQVVADRVRDPAMIETLSRYFANEQLRLILVLVVDPEQGEENDILFQNLLAFLDLHFPSLRERTSLAV
LVSKPEQALQRLQERDERYRRHEELSADACEAFVQRFAPRTYRILDGWTHQDRVQLMALHLGTVADGEHGPRLQEPDYDD
IRDIFAWIYGQFGGGRMGPTWWQRILEWLRL

Sequences:

>Translated_351_residues
MVEPRESRWQLRRYYERRPEQEQPVTEAGDEGPTPAPSPWPSPEERLAADEEPVQRGALLDDNIDQRQGNYLISFGFPGS
GKTTFQSFLAYYVTHIGPFEAQPLITPEESVQGWEPMAIFNEWMRIWGQGRFPPANPVDEGDIRELSFRVRPLQGGGEPV
DLSFLEASGELMTQVVADRVRDPAMIETLSRYFANEQLRLILVLVVDPEQGEENDILFQNLLAFLDLHFPSLRERTSLAV
LVSKPEQALQRLQERDERYRRHEELSADACEAFVQRFAPRTYRILDGWTHQDRVQLMALHLGTVADGEHGPRLQEPDYDD
IRDIFAWIYGQFGGGRMGPTWWQRILEWLRL
>Mature_351_residues
MVEPRESRWQLRRYYERRPEQEQPVTEAGDEGPTPAPSPWPSPEERLAADEEPVQRGALLDDNIDQRQGNYLISFGFPGS
GKTTFQSFLAYYVTHIGPFEAQPLITPEESVQGWEPMAIFNEWMRIWGQGRFPPANPVDEGDIRELSFRVRPLQGGGEPV
DLSFLEASGELMTQVVADRVRDPAMIETLSRYFANEQLRLILVLVVDPEQGEENDILFQNLLAFLDLHFPSLRERTSLAV
LVSKPEQALQRLQERDERYRRHEELSADACEAFVQRFAPRTYRILDGWTHQDRVQLMALHLGTVADGEHGPRLQEPDYDD
IRDIFAWIYGQFGGGRMGPTWWQRILEWLRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40592; Mature: 40592

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEPRESRWQLRRYYERRPEQEQPVTEAGDEGPTPAPSPWPSPEERLAADEEPVQRGALL
CCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCC
DDNIDQRQGNYLISFGFPGSGKTTFQSFLAYYVTHIGPFEAQPLITPEESVQGWEPMAIF
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHH
NEWMRIWGQGRFPPANPVDEGDIRELSFRVRPLQGGGEPVDLSFLEASGELMTQVVADRV
HHHHHHHCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHC
RDPAMIETLSRYFANEQLRLILVLVVDPEQGEENDILFQNLLAFLDLHFPSLRERTSLAV
CCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCEEE
LVSKPEQALQRLQERDERYRRHEELSADACEAFVQRFAPRTYRILDGWTHQDRVQLMALH
EECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH
LGTVADGEHGPRLQEPDYDDIRDIFAWIYGQFGGGRMGPTWWQRILEWLRL
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MVEPRESRWQLRRYYERRPEQEQPVTEAGDEGPTPAPSPWPSPEERLAADEEPVQRGALL
CCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCC
DDNIDQRQGNYLISFGFPGSGKTTFQSFLAYYVTHIGPFEAQPLITPEESVQGWEPMAIF
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHH
NEWMRIWGQGRFPPANPVDEGDIRELSFRVRPLQGGGEPVDLSFLEASGELMTQVVADRV
HHHHHHHCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHC
RDPAMIETLSRYFANEQLRLILVLVVDPEQGEENDILFQNLLAFLDLHFPSLRERTSLAV
CCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCEEE
LVSKPEQALQRLQERDERYRRHEELSADACEAFVQRFAPRTYRILDGWTHQDRVQLMALH
EECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH
LGTVADGEHGPRLQEPDYDDIRDIFAWIYGQFGGGRMGPTWWQRILEWLRL
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA