Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

Click here to switch to the map view.

The map label for this gene is arsR [C]

Identifier: 121998203

GI number: 121998203

Start: 1534159

End: 1534500

Strand: Reverse

Name: arsR [C]

Synonym: Hhal_1421

Alternate gene names: 121998203

Gene position: 1534500-1534159 (Counterclockwise)

Preceding gene: 121998207

Following gene: 121998202

Centisome position: 57.29

GC content: 68.42

Gene sequence:

>342_bases
ATGGGCATGGGAGAATCCCAACCGGATGCAGAGACATTGGCGTTCATCGCCGCGCAGTTCCGGGCGCTGGGTGAGCCGCT
GCGCCTTCAGCTGCTCCACGCCCTGCGGGATGGTGAGAAGAGTGTTGGGGAGCTGGTGGAGCTCACCGGCTCTTCGCAAC
CGAACATCTCGCGGCACCTGAGCGTGCTGCGCCAGCACGGCCTGGTGCGGCGGCGCAGTTGCGGAACACTGGCCTACTTC
GCCATCGCGGCCCCCCACGTCTTCGATCTGTGTGATGCGGTGTGCGGCGTCCAGGGGGGCGGGCAGCCGGCGTCCGCGCC
GCGTCAGCCCGACGTGCCGTAA

Upstream 100 bases:

>100_bases
ATAATGGATTCGCTCACTTGTATATGAGAGTATATGCATATACTGCTACACGCATCAATAGTCGCCGGGGCCTGCCCGGC
GCGGCGGAGGGGGTGAGGTT

Downstream 100 bases:

>100_bases
TCCTTGCGGGCCTGTCCGGCGGGGGGCGGTTAGCTGTTAGACTGAGCCGCCATCGACGGGTCCACAGAAGGCGAACAACA
TGGCCGCAGGAACAGAGGGC

Product: regulatory protein, ArsR

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; Regulatory Protein ArsR; ArsR Family Regulatory Protein; ArsR Family Transcriptional Repressor; Transcriptional Regulator TrmB; Transcription Regulator ArsR

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MGMGESQPDAETLAFIAAQFRALGEPLRLQLLHALRDGEKSVGELVELTGSSQPNISRHLSVLRQHGLVRRRSCGTLAYF
AIAAPHVFDLCDAVCGVQGGGQPASAPRQPDVP

Sequences:

>Translated_113_residues
MGMGESQPDAETLAFIAAQFRALGEPLRLQLLHALRDGEKSVGELVELTGSSQPNISRHLSVLRQHGLVRRRSCGTLAYF
AIAAPHVFDLCDAVCGVQGGGQPASAPRQPDVP
>Mature_112_residues
GMGESQPDAETLAFIAAQFRALGEPLRLQLLHALRDGEKSVGELVELTGSSQPNISRHLSVLRQHGLVRRRSCGTLAYFA
IAAPHVFDLCDAVCGVQGGGQPASAPRQPDVP

Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12016; Mature: 11885

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMGESQPDAETLAFIAAQFRALGEPLRLQLLHALRDGEKSVGELVELTGSSQPNISRHL
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHH
SVLRQHGLVRRRSCGTLAYFAIAAPHVFDLCDAVCGVQGGGQPASAPRQPDVP
HHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GMGESQPDAETLAFIAAQFRALGEPLRLQLLHALRDGEKSVGELVELTGSSQPNISRHL
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHH
SVLRQHGLVRRRSCGTLAYFAIAAPHVFDLCDAVCGVQGGGQPASAPRQPDVP
HHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA