Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610568

Identifier: 121610568

GI number: 121610568

Start: 4026097

End: 4027056

Strand: Direct

Name: 121610568

Synonym: Veis_3641

Alternate gene names: NA

Gene position: 4026097-4027056 (Clockwise)

Preceding gene: 121610562

Following gene: 121610569

Centisome position: 72.32

GC content: 64.38

Gene sequence:

>960_bases
ATGAGCAGATCGGTTGTGAAATGGCTGGTGCTGGCCGCAGCATGCGTGCCGGGTCTGGCCGCACAGGCGCAGGCGCAAAA
CACCAAACTGGTGCTGGGCATGTCCGGCTGGACGGGCTTTGCGCCGCTGACGCTGGCCGACAAGGCGGGCCTTTTCAGCA
AGCATGGCCTGGATGTGGAGATCAAGATGATTGCGCAAAAGGACCGCCATCTGGCCCTGGCCGCCAAGTCGATTCAGTGC
GCTGCGACCACGGTCGAGACCCATGTGGCCTGGAATGCCAACGGCGTGCCCATCGTGCAGATTTTTCAGACGGACAAGTC
CTACGGCGCCGACGGCCTGGCGGTGCGCGGCGATATCAAGGGCTTTGCCGATCTGCGCGGCAAGACCATTGGCGTGGATG
CGCCGGGCACCGCGCCTTTCTTTGGCCTGGCCTGGATGCTCAGCAAGAACGGCATGACGCTCAAGGATGTCAAGCTCACC
ACGCTGTCGCCCCAGGCTGCGGCCCAGGCTTTCGTGACCGGGCAAGGCGATGCGGCGATGACCTACGAGCCGTATCTTTC
CACCGTGCGCGACAACCCGGCTGCGGGCAAGATTTTGGCCACCACGCTCGACTATCCGATGGTGATCGACACGGTCGGCT
GCGACCCCGCCTGGCTCAAGGCCAACCCCCGGGCCGCACAGGCGCTGGCCGATTCCTATTTTGCGGCGCTGGACATGATC
CGGGCCGATCCCGCCAAGTCCAACGACATCATGGGCGCGGCGGTCAAGCAGACGGGCGCACAGTTTGCCCGGTCGGCGTC
GTTTTTGCGCTGGCAGGATCGGGCCGCGAACCAGCGGTTTTTCGCCGGCGAGCTGACCGCGTTCATGAAGGACGCCACGG
CCATCTTGCTGGCGACCGGCATCATCCACAAAGCGCCGGATGATCTGGCCGCGCTGTTCGACGCACGCTTCGTGCAATGA

Upstream 100 bases:

>100_bases
CAACCTGTATAGACAGGAATACACTGGCAGTCATCATGCCCGCGCCGGCGCGCGCCAGCGCGGGCGGGCAACGCAATTTT
TCTTCAGACAGGAGCAGATG

Downstream 100 bases:

>100_bases
GGCCCGTGCCACGGCATCTGTCTGCCGCAGCGCCGCTGCGGCGTGCGCTGACCCCGCTGGCGCCCGTCAGTGCCCGCAGC
CGCTGGCTGCTGGGCCTGGC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NMT1/THI5 Like Domain-Containing Protein; NMT1/THI5-Like Domain-Containing Protein; NLPA Lipoprotein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; NlpA Lipoprotein; Amino Acid ABC Transporter; Signal Peptide Protein; NMT1/THI5 Like Family

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSRSVVKWLVLAAACVPGLAAQAQAQNTKLVLGMSGWTGFAPLTLADKAGLFSKHGLDVEIKMIAQKDRHLALAAKSIQC
AATTVETHVAWNANGVPIVQIFQTDKSYGADGLAVRGDIKGFADLRGKTIGVDAPGTAPFFGLAWMLSKNGMTLKDVKLT
TLSPQAAAQAFVTGQGDAAMTYEPYLSTVRDNPAAGKILATTLDYPMVIDTVGCDPAWLKANPRAAQALADSYFAALDMI
RADPAKSNDIMGAAVKQTGAQFARSASFLRWQDRAANQRFFAGELTAFMKDATAILLATGIIHKAPDDLAALFDARFVQ

Sequences:

>Translated_319_residues
MSRSVVKWLVLAAACVPGLAAQAQAQNTKLVLGMSGWTGFAPLTLADKAGLFSKHGLDVEIKMIAQKDRHLALAAKSIQC
AATTVETHVAWNANGVPIVQIFQTDKSYGADGLAVRGDIKGFADLRGKTIGVDAPGTAPFFGLAWMLSKNGMTLKDVKLT
TLSPQAAAQAFVTGQGDAAMTYEPYLSTVRDNPAAGKILATTLDYPMVIDTVGCDPAWLKANPRAAQALADSYFAALDMI
RADPAKSNDIMGAAVKQTGAQFARSASFLRWQDRAANQRFFAGELTAFMKDATAILLATGIIHKAPDDLAALFDARFVQ
>Mature_318_residues
SRSVVKWLVLAAACVPGLAAQAQAQNTKLVLGMSGWTGFAPLTLADKAGLFSKHGLDVEIKMIAQKDRHLALAAKSIQCA
ATTVETHVAWNANGVPIVQIFQTDKSYGADGLAVRGDIKGFADLRGKTIGVDAPGTAPFFGLAWMLSKNGMTLKDVKLTT
LSPQAAAQAFVTGQGDAAMTYEPYLSTVRDNPAAGKILATTLDYPMVIDTVGCDPAWLKANPRAAQALADSYFAALDMIR
ADPAKSNDIMGAAVKQTGAQFARSASFLRWQDRAANQRFFAGELTAFMKDATAILLATGIIHKAPDDLAALFDARFVQ

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33809; Mature: 33678

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSVVKWLVLAAACVPGLAAQAQAQNTKLVLGMSGWTGFAPLTLADKAGLFSKHGLDVE
CCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCEE
IKMIAQKDRHLALAAKSIQCAATTVETHVAWNANGVPIVQIFQTDKSYGADGLAVRGDIK
EEEEECCCCEEEEEECCEEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCC
GFADLRGKTIGVDAPGTAPFFGLAWMLSKNGMTLKDVKLTTLSPQAAAQAFVTGQGDAAM
CHHHCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEEECHHHHHEEEEECCCCCEE
TYEPYLSTVRDNPAAGKILATTLDYPMVIDTVGCDPAWLKANPRAAQALADSYFAALDMI
EEHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHH
RADPAKSNDIMGAAVKQTGAQFARSASFLRWQDRAANQRFFAGELTAFMKDATAILLATG
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH
IIHKAPDDLAALFDARFVQ
HHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SRSVVKWLVLAAACVPGLAAQAQAQNTKLVLGMSGWTGFAPLTLADKAGLFSKHGLDVE
CHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCEE
IKMIAQKDRHLALAAKSIQCAATTVETHVAWNANGVPIVQIFQTDKSYGADGLAVRGDIK
EEEEECCCCEEEEEECCEEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCC
GFADLRGKTIGVDAPGTAPFFGLAWMLSKNGMTLKDVKLTTLSPQAAAQAFVTGQGDAAM
CHHHCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEEECHHHHHEEEEECCCCCEE
TYEPYLSTVRDNPAAGKILATTLDYPMVIDTVGCDPAWLKANPRAAQALADSYFAALDMI
EEHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHH
RADPAKSNDIMGAAVKQTGAQFARSASFLRWQDRAANQRFFAGELTAFMKDATAILLATG
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH
IIHKAPDDLAALFDARFVQ
HHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA