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The map label for this gene is ssuC [C]

Identifier: 121610569

GI number: 121610569

Start: 4027053

End: 4027880

Strand: Direct

Name: ssuC [C]

Synonym: Veis_3642

Alternate gene names: 121610569

Gene position: 4027053-4027880 (Clockwise)

Preceding gene: 121610568

Following gene: 121610570

Centisome position: 72.34

GC content: 66.43

Gene sequence:

>828_bases
ATGAGGCCCGTGCCACGGCATCTGTCTGCCGCAGCGCCGCTGCGGCGTGCGCTGACCCCGCTGGCGCCCGTCAGTGCCCG
CAGCCGCTGGCTGCTGGGCCTGGCCTTTTTCGTCATATTCGTGGCGCTGTGGACGTGGTTCACGCTGGGCGGCTGGGTCT
CGCCGACCTTTTTGGCCAGCCCGCCGACGATGCTCCGGCAAGCATGGTTGCTGCTGACCGAGTACGGGTTCGTCAAGGAC
ATCGGCATGACGGTGTGGCGCGTGCTGGCGGGCTTCGTGCTGGCCGCTGCGGTCGCCCTGCCCCTGGGCATTGCGATGGG
CGCTTACAAGGGCATCGAGGCTTTTTTCGAGCCCTTCGTTTCGTTTTGCCGCTACCTGCCGGCGTCGGCGTTCATTCCGC
TGCTGATCCTGTGGGCGGGCATTGGCGAGGCGCAGAAGATCCTGGTGATCTTCATCGGCTCGGTGTTTCAGATCACGCTG
ATGGTGGCGGTGACGGTGGGCAGCGCGCGGCGCGATCTGGTGGAGGCGGCTTACACGCTGGGCGCGGGCCACCGGGGCAT
CGTGACGCGGGTGCTGATCCCCGGCGCCGCGCCCGGTATCGCCGAGACCCTGCGCCTGGTGCTCGGCTGGGCCTGGACCT
ATGTGATCGTGGCCGAACTGATCGGCTCCTCGTCGGGCATCGGCCACATGATCACCGACAGCCAGGCGCTGCTCAACACC
GGCCAGATCATCTTCGGCATCATCACCATCGGTCTGATCGGACTGCTGTCGGATCTGGCTTTCAAGGCGCTGAACCAGCG
GCTGTTTGCCTGGAGCCTGCTGCCATGA

Upstream 100 bases:

>100_bases
CCGCGTTCATGAAGGACGCCACGGCCATCTTGCTGGCGACCGGCATCATCCACAAAGCGCCGGATGATCTGGCCGCGCTG
TTCGACGCACGCTTCGTGCA

Downstream 100 bases:

>100_bases
GCCACGTCTCGATCGAGGCCGTGACGCGCGTTTTCGAGAGCGCCGGGGGCCAGCGCACGCAGGCGCTGCTGCCGGTCGAT
TGCACGGTGCGGGACAACGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MRPVPRHLSAAAPLRRALTPLAPVSARSRWLLGLAFFVIFVALWTWFTLGGWVSPTFLASPPTMLRQAWLLLTEYGFVKD
IGMTVWRVLAGFVLAAAVALPLGIAMGAYKGIEAFFEPFVSFCRYLPASAFIPLLILWAGIGEAQKILVIFIGSVFQITL
MVAVTVGSARRDLVEAAYTLGAGHRGIVTRVLIPGAAPGIAETLRLVLGWAWTYVIVAELIGSSSGIGHMITDSQALLNT
GQIIFGIITIGLIGLLSDLAFKALNQRLFAWSLLP

Sequences:

>Translated_275_residues
MRPVPRHLSAAAPLRRALTPLAPVSARSRWLLGLAFFVIFVALWTWFTLGGWVSPTFLASPPTMLRQAWLLLTEYGFVKD
IGMTVWRVLAGFVLAAAVALPLGIAMGAYKGIEAFFEPFVSFCRYLPASAFIPLLILWAGIGEAQKILVIFIGSVFQITL
MVAVTVGSARRDLVEAAYTLGAGHRGIVTRVLIPGAAPGIAETLRLVLGWAWTYVIVAELIGSSSGIGHMITDSQALLNT
GQIIFGIITIGLIGLLSDLAFKALNQRLFAWSLLP
>Mature_275_residues
MRPVPRHLSAAAPLRRALTPLAPVSARSRWLLGLAFFVIFVALWTWFTLGGWVSPTFLASPPTMLRQAWLLLTEYGFVKD
IGMTVWRVLAGFVLAAAVALPLGIAMGAYKGIEAFFEPFVSFCRYLPASAFIPLLILWAGIGEAQKILVIFIGSVFQITL
MVAVTVGSARRDLVEAAYTLGAGHRGIVTRVLIPGAAPGIAETLRLVLGWAWTYVIVAELIGSSSGIGHMITDSQALLNT
GQIIFGIITIGLIGLLSDLAFKALNQRLFAWSLLP

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=248, Percent_Identity=31.0483870967742, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1786564, Length=240, Percent_Identity=30.8333333333333, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29676; Mature: 29676

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPVPRHLSAAAPLRRALTPLAPVSARSRWLLGLAFFVIFVALWTWFTLGGWVSPTFLAS
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PPTMLRQAWLLLTEYGFVKDIGMTVWRVLAGFVLAAAVALPLGIAMGAYKGIEAFFEPFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFCRYLPASAFIPLLILWAGIGEAQKILVIFIGSVFQITLMVAVTVGSARRDLVEAAYTL
HHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
GAGHRGIVTRVLIPGAAPGIAETLRLVLGWAWTYVIVAELIGSSSGIGHMITDSQALLNT
CCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHH
GQIIFGIITIGLIGLLSDLAFKALNQRLFAWSLLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA