| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610562
Identifier: 121610562
GI number: 121610562
Start: 4019406
End: 4019750
Strand: Direct
Name: 121610562
Synonym: Veis_3635
Alternate gene names: NA
Gene position: 4019406-4019750 (Clockwise)
Preceding gene: 121610559
Following gene: 121610568
Centisome position: 72.2
GC content: 69.57
Gene sequence:
>345_bases TTGGACGAGTGGCGGGGTGTCAGTGGCGGGGGATGTCATGGCAGCGAATCCATGGGCGCCATTGTGCCGTGCCGGGTGCG GGCCGGGTTGCCCTGCGCAGGCCCGGCGCTTTGCCATTGCAGGGCCACTGCGCAGTCCATCAGGCCCACGGCCCGGAGCA GCCACCAAGGCACGCCTGACGCAGTGCCTGCCACGGCAGGTGGCCGATCATCATCGGGCACGAGAAGGCGCAGGTCTTTG GCCTTGCGCCTGTCCCTGGTCATTCAGCGGCCCTTGGTCCCTGGGGCCCTTGGCGTGTCATCACGGCAGGCGCCCTGCGG CGGCATGGCCCGATGGCGCTCTTGA
Upstream 100 bases:
>100_bases TCACCACGCGCATGCGCGTCGGCAAAGGCACGCACTGCGGGCGCATCGCTGTCGATCAGCGCGGTGGCGCGCAGGGTGGC GGGGGTGGGTTGGTCGGTCA
Downstream 100 bases:
>100_bases CGGTCTGGGCGCGCGGACGGGGCTTCATGCCGCATCCTTGGCCCCGGTGTGTTGCCACTTGGCGCCGCGCCCTTTGCCGG TGGGGGCGATCAGCCCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MDEWRGVSGGGCHGSESMGAIVPCRVRAGLPCAGPALCHCRATAQSIRPTARSSHQGTPDAVPATAGGRSSSGTRRRRSL ALRLSLVIQRPLVPGALGVSSRQAPCGGMARWRS
Sequences:
>Translated_114_residues MDEWRGVSGGGCHGSESMGAIVPCRVRAGLPCAGPALCHCRATAQSIRPTARSSHQGTPDAVPATAGGRSSSGTRRRRSL ALRLSLVIQRPLVPGALGVSSRQAPCGGMARWRS >Mature_114_residues MDEWRGVSGGGCHGSESMGAIVPCRVRAGLPCAGPALCHCRATAQSIRPTARSSHQGTPDAVPATAGGRSSSGTRRRRSL ALRLSLVIQRPLVPGALGVSSRQAPCGGMARWRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11760; Mature: 11760
Theoretical pI: Translated: 12.16; Mature: 12.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEWRGVSGGGCHGSESMGAIVPCRVRAGLPCAGPALCHCRATAQSIRPTARSSHQGTPD CCCCCCCCCCCCCCCCCCCCEECEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC AVPATAGGRSSSGTRRRRSLALRLSLVIQRPLVPGALGVSSRQAPCGGMARWRS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDEWRGVSGGGCHGSESMGAIVPCRVRAGLPCAGPALCHCRATAQSIRPTARSSHQGTPD CCCCCCCCCCCCCCCCCCCCEECEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC AVPATAGGRSSSGTRRRRSLALRLSLVIQRPLVPGALGVSSRQAPCGGMARWRS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA