Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598463

Identifier: 120598463

GI number: 120598463

Start: 1887329

End: 1887826

Strand: Direct

Name: 120598463

Synonym: Sputw3181_1646

Alternate gene names: NA

Gene position: 1887329-1887826 (Clockwise)

Preceding gene: 120598462

Following gene: 120598464

Centisome position: 40.08

GC content: 41.57

Gene sequence:

>498_bases
TTGGAAACCTATTTGAATTTCAGTCACATCACTTGGCTTGATGATCAAGGCCATATCAAACCTCCCATTTTCCTCTACGC
GATTTTAGCTTTTTTAGCCCGCGGCTGGTGTATTTTTATCGCATCTTTAACACAGGCAAATGATAGGACTGAATTAGTAC
GGATTTTTTACCCTGAAAAATCTGACTTTTTACTTGCCCTTGCCACAGGCTTTGGGGCTGTACTGCTTTATATTTTAGTG
CTTTGTGAGCGTCGTCGTTCACCTCAATGGTTAAGCCCTTTTTTTGCACTCCTAAAATGGGGCTTATGGCCGTTGTTATT
GGTGGATGCTGTTCTGCTTGGGCAACGATTGACGCATGGGCAGTTTATGTTTCACTGGAGCCTTGCTCTTGATGCACTTG
TATTGTTTTGGTCCAGTTTATATGTTCTAAAATCGAAACGGCTTCATTATTATCTTGCCGATTGGCCTAAAATGGTGGAT
GTTGGACCCAAAATATAA

Upstream 100 bases:

>100_bases
CTTTTTTAATTCAGTGTTAAGTATTTGGTATCGGACGAAGAACCATTGAAATTGGCAGAATAGACACCATCTTACCTTTA
CACTGTAGTTACTTCTTTAA

Downstream 100 bases:

>100_bases
ATTATCTATCTGTTTGTAATTAAAAATGATTTCACATTATTGGCATAAGGTTTTTAGCATAGTGTGTGTTACCCCCCAGT
TTGATAAGCATTTTTTGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
METYLNFSHITWLDDQGHIKPPIFLYAILAFLARGWCIFIASLTQANDRTELVRIFYPEKSDFLLALATGFGAVLLYILV
LCERRRSPQWLSPFFALLKWGLWPLLLVDAVLLGQRLTHGQFMFHWSLALDALVLFWSSLYVLKSKRLHYYLADWPKMVD
VGPKI

Sequences:

>Translated_165_residues
METYLNFSHITWLDDQGHIKPPIFLYAILAFLARGWCIFIASLTQANDRTELVRIFYPEKSDFLLALATGFGAVLLYILV
LCERRRSPQWLSPFFALLKWGLWPLLLVDAVLLGQRLTHGQFMFHWSLALDALVLFWSSLYVLKSKRLHYYLADWPKMVD
VGPKI
>Mature_165_residues
METYLNFSHITWLDDQGHIKPPIFLYAILAFLARGWCIFIASLTQANDRTELVRIFYPEKSDFLLALATGFGAVLLYILV
LCERRRSPQWLSPFFALLKWGLWPLLLVDAVLLGQRLTHGQFMFHWSLALDALVLFWSSLYVLKSKRLHYYLADWPKMVD
VGPKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19234; Mature: 19234

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METYLNFSHITWLDDQGHIKPPIFLYAILAFLARGWCIFIASLTQANDRTELVRIFYPEK
CCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHEEEEECCCC
SDFLLALATGFGAVLLYILVLCERRRSPQWLSPFFALLKWGLWPLLLVDAVLLGQRLTHG
CCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCC
QFMFHWSLALDALVLFWSSLYVLKSKRLHYYLADWPKMVDVGPKI
CCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCCCCC
>Mature Secondary Structure
METYLNFSHITWLDDQGHIKPPIFLYAILAFLARGWCIFIASLTQANDRTELVRIFYPEK
CCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHEEEEECCCC
SDFLLALATGFGAVLLYILVLCERRRSPQWLSPFFALLKWGLWPLLLVDAVLLGQRLTHG
CCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCC
QFMFHWSLALDALVLFWSSLYVLKSKRLHYYLADWPKMVDVGPKI
CCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA