| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is guaB [H]
Identifier: 120598184
GI number: 120598184
Start: 1541929
End: 1543395
Strand: Direct
Name: guaB [H]
Synonym: Sputw3181_1361
Alternate gene names: 120598184
Gene position: 1541929-1543395 (Clockwise)
Preceding gene: 120598182
Following gene: 120598185
Centisome position: 32.75
GC content: 47.72
Gene sequence:
>1467_bases ATGCTACGTTTAATTAAAGAAGCGCTTACTTTTGACGATGTGTTACTTGTTCCTGCGCATTCTACTGTACTCCCAAATAC CGCAGTTCTTAAAACTCGCCTAACCAATACTATCGAACTCAACATTCCGCTTGTGTCTGCCGCTATGGACACAGTTACCG AAGCTCGCCTTGCGATTGCGATGGCGCAGGAAGGTGGCTTAGGTTTTATTCACAAAAACATGAGTATTGAGAAACAAGCC GAAGAAGTGCGTAAAGTAAAAATTTACGAAGCTGGCGTGGTTCAACAACCTGTGACAGTGACTCCTTCAACGACACTTGC TGATCTGAAAGTGTTAACCCTGAAAAACGGTTTTGCCGGTTACCCCGTGGTTAACGAAGCGAATGAGCTTGTCGGTATCA TTACTGGCCGTGACGTGCGCTTTGTGACGGATTGGAGCAAAACGGTAGAGGAAGTGATGACGCCTAAGTCGCGTTTAGTC ACCGTTGCTGAAGGCACTAAGTTAGATGAAGTGCAAAAATTAATGCACTCTAACCGTATTGAAAAAGTGCTGGTTGTCGA TGATAACTTTAAATTAAAAGGGTTGATTACCGTTAAAGACTTCGAGAAAGCCGAGCGTAAACCTAACGCCTGTAAAGATG AGTTAGGCCGTTTACGCGTGGGCGCCGCCGTTGGTGCGGGTGCCGGCAACGAAGAGCGCGTTGATGCGCTGGTTAAGGCC GGTGTTGACGTACTGTTGATCGACTCTTCCCATGGACATTCTGAAGGCGTATTACAACGTATTCGCGAAACCCGTGCCAA GTACCCAGATTTACAAATTGTGGGTGGTAACGTCGCCACGGCTGAAGGTGCTTTAGCCTTAGTTGAAGCGGGTGTTAACG CTGTTAAAGTGGGTATTGGTCCTGGTTCTATCTGTACAACCCGTATCGTAACCGGTGTTGGTGTGCCCCAAATTACCGCA GTTTCCGATGCCGCCGAAGCCGTAAAAGGCTTAGGTATTCCTGTGATTGCCGATGGTGGTGTGCGTTTTTCTGGCGACTT AGCCAAAGCCCTTGCCGCGGGTGCATCTTGTATTATGGCGGGTTCAATGTTTGCTGGTACCGATGAAGCACCAGGCGAAA CTGAACTCTATCAAGGGCGTGCATATAAATCATACCGTGGTATGGGGTCATTAGGCGCTATGTCTCAAGGCTCTTCTGAT CGTTATTTCCAATCTGACAATGCTGCCGACAAACTGGTGCCAGAAGGCATTGAAGGCCGCGTGCCTTATAAAGGCAAGCT TAAGGAAATCATCCATCAACATATGGGTGGTTTACGTTCATGCATGGGCTTAACAGGCTGTGCAACCATTAGCGAGCTGA ATGAAAAAGCGCAATTTGTAAAAGTGACTTCTGCGGGTATGGGCGAGTCCCATGTACACGATGTGACTATCACTAAAGAA GCGCCGAACTACCGTTCTGGTTCATAA
Upstream 100 bases:
>100_bases GGATATTTGCTATTTTCCATTTACCGCGCCCCATATGCAAGGTATAATCCCGCCGCAATATTTCACCTCTAAATCCTACT CAACTGGGGAGATGTTGCTA
Downstream 100 bases:
>100_bases ATGTTTGATGTAGTGGGGCGGCAATAAGCCGCCCCACTAACAATATGTGTGATGCTCTCAAGCTTGACGTTGTCAGTTTT GAGCCAAGTTAAACAATAGA
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MLRLIKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNTIELNIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEKQA EEVRKVKIYEAGVVQQPVTVTPSTTLADLKVLTLKNGFAGYPVVNEANELVGIITGRDVRFVTDWSKTVEEVMTPKSRLV TVAEGTKLDEVQKLMHSNRIEKVLVVDDNFKLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA GVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIVGGNVATAEGALALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAEAVKGLGIPVIADGGVRFSGDLAKALAAGASCIMAGSMFAGTDEAPGETELYQGRAYKSYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGIEGRVPYKGKLKEIIHQHMGGLRSCMGLTGCATISELNEKAQFVKVTSAGMGESHVHDVTITKE APNYRSGS
Sequences:
>Translated_488_residues MLRLIKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNTIELNIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEKQA EEVRKVKIYEAGVVQQPVTVTPSTTLADLKVLTLKNGFAGYPVVNEANELVGIITGRDVRFVTDWSKTVEEVMTPKSRLV TVAEGTKLDEVQKLMHSNRIEKVLVVDDNFKLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA GVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIVGGNVATAEGALALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAEAVKGLGIPVIADGGVRFSGDLAKALAAGASCIMAGSMFAGTDEAPGETELYQGRAYKSYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGIEGRVPYKGKLKEIIHQHMGGLRSCMGLTGCATISELNEKAQFVKVTSAGMGESHVHDVTITKE APNYRSGS >Mature_488_residues MLRLIKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNTIELNIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEKQA EEVRKVKIYEAGVVQQPVTVTPSTTLADLKVLTLKNGFAGYPVVNEANELVGIITGRDVRFVTDWSKTVEEVMTPKSRLV TVAEGTKLDEVQKLMHSNRIEKVLVVDDNFKLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA GVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIVGGNVATAEGALALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAEAVKGLGIPVIADGGVRFSGDLAKALAAGASCIMAGSMFAGTDEAPGETELYQGRAYKSYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGIEGRVPYKGKLKEIIHQHMGGLRSCMGLTGCATISELNEKAQFVKVTSAGMGESHVHDVTITKE APNYRSGS
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=480, Percent_Identity=40, Blast_Score=332, Evalue=4e-91, Organism=Homo sapiens, GI66933016, Length=482, Percent_Identity=39.8340248962656, Blast_Score=332, Evalue=6e-91, Organism=Homo sapiens, GI34328930, Length=480, Percent_Identity=40, Blast_Score=332, Evalue=7e-91, Organism=Homo sapiens, GI34328928, Length=480, Percent_Identity=40, Blast_Score=331, Evalue=7e-91, Organism=Homo sapiens, GI156616279, Length=480, Percent_Identity=40, Blast_Score=331, Evalue=9e-91, Organism=Homo sapiens, GI217035152, Length=474, Percent_Identity=40.084388185654, Blast_Score=325, Evalue=6e-89, Organism=Homo sapiens, GI217035148, Length=480, Percent_Identity=38.9583333333333, Blast_Score=317, Evalue=2e-86, Organism=Homo sapiens, GI217035150, Length=480, Percent_Identity=36.6666666666667, Blast_Score=290, Evalue=2e-78, Organism=Homo sapiens, GI156104880, Length=246, Percent_Identity=38.2113821138211, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI50541956, Length=247, Percent_Identity=36.8421052631579, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI50541954, Length=247, Percent_Identity=36.8421052631579, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI50541952, Length=247, Percent_Identity=36.8421052631579, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI50541948, Length=247, Percent_Identity=36.8421052631579, Blast_Score=163, Evalue=4e-40, Organism=Escherichia coli, GI1788855, Length=488, Percent_Identity=80.327868852459, Blast_Score=745, Evalue=0.0, Organism=Escherichia coli, GI1786293, Length=221, Percent_Identity=36.1990950226244, Blast_Score=145, Evalue=6e-36, Organism=Caenorhabditis elegans, GI71994385, Length=475, Percent_Identity=36.2105263157895, Blast_Score=266, Evalue=2e-71, Organism=Caenorhabditis elegans, GI71994389, Length=422, Percent_Identity=38.3886255924171, Blast_Score=258, Evalue=7e-69, Organism=Caenorhabditis elegans, GI17560440, Length=238, Percent_Identity=36.9747899159664, Blast_Score=159, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6323585, Length=483, Percent_Identity=40.1656314699793, Blast_Score=340, Evalue=4e-94, Organism=Saccharomyces cerevisiae, GI6322012, Length=486, Percent_Identity=39.3004115226337, Blast_Score=332, Evalue=6e-92, Organism=Saccharomyces cerevisiae, GI6323464, Length=482, Percent_Identity=40.0414937759336, Blast_Score=326, Evalue=4e-90, Organism=Saccharomyces cerevisiae, GI6319352, Length=342, Percent_Identity=40.9356725146199, Blast_Score=256, Evalue=7e-69, Organism=Saccharomyces cerevisiae, GI6319353, Length=122, Percent_Identity=39.344262295082, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24641071, Length=483, Percent_Identity=38.9233954451346, Blast_Score=316, Evalue=2e-86, Organism=Drosophila melanogaster, GI24641073, Length=483, Percent_Identity=38.9233954451346, Blast_Score=316, Evalue=2e-86, Organism=Drosophila melanogaster, GI28571163, Length=441, Percent_Identity=39.4557823129252, Blast_Score=289, Evalue=4e-78,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51677; Mature: 51677
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLIKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNTIELNIPLVSAAMDTVTEARLAIA CHHHHHHHCCCCCEEEEECCCCCCCCHHHHHEECCCEEEEECCHHHHHHHHHHHHHHEEE MAQEGGLGFIHKNMSIEKQAEEVRKVKIYEAGVVQQPVTVTPSTTLADLKVLTLKNGFAG EECCCCEEEEECCCCHHHHHHHHHHEEEEECCCCCCCEEECCCCCHHCEEEEEEECCCCC YPVVNEANELVGIITGRDVRFVTDWSKTVEEVMTPKSRLVTVAEGTKLDEVQKLMHSNRI CCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHCCCC EKVLVVDDNFKLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA CEEEEECCCEEEEEEEEECCHHHHHCCCCHHHHHHCCEEECEEECCCCCCHHHHHHHHHC GVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIVGGNVATAEGALALVEAGVNAVKVGIG CCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCEECCCCHHHHHHCCCCEEEEECC PGSICTTRIVTGVGVPQITAVSDAAEAVKGLGIPVIADGGVRFSGDLAKALAAGASCIMA CCCHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCEEEECCCEEECHHHHHHHHCCCHHEEE GSMFAGTDEAPGETELYQGRAYKSYRGMGSLGAMSQGSSDRYFQSDNAADKLVPEGIEGR CCEECCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC VPYKGKLKEIIHQHMGGLRSCMGLTGCATISELNEKAQFVKVTSAGMGESHVHDVTITKE CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEC APNYRSGS CCCCCCCC >Mature Secondary Structure MLRLIKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNTIELNIPLVSAAMDTVTEARLAIA CHHHHHHHCCCCCEEEEECCCCCCCCHHHHHEECCCEEEEECCHHHHHHHHHHHHHHEEE MAQEGGLGFIHKNMSIEKQAEEVRKVKIYEAGVVQQPVTVTPSTTLADLKVLTLKNGFAG EECCCCEEEEECCCCHHHHHHHHHHEEEEECCCCCCCEEECCCCCHHCEEEEEEECCCCC YPVVNEANELVGIITGRDVRFVTDWSKTVEEVMTPKSRLVTVAEGTKLDEVQKLMHSNRI CCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHCCCC EKVLVVDDNFKLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA CEEEEECCCEEEEEEEEECCHHHHHCCCCHHHHHHCCEEECEEECCCCCCHHHHHHHHHC GVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIVGGNVATAEGALALVEAGVNAVKVGIG CCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCEECCCCHHHHHHCCCCEEEEECC PGSICTTRIVTGVGVPQITAVSDAAEAVKGLGIPVIADGGVRFSGDLAKALAAGASCIMA CCCHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCEEEECCCEEECHHHHHHHHCCCHHEEE GSMFAGTDEAPGETELYQGRAYKSYRGMGSLGAMSQGSSDRYFQSDNAADKLVPEGIEGR CCEECCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC VPYKGKLKEIIHQHMGGLRSCMGLTGCATISELNEKAQFVKVTSAGMGESHVHDVTITKE CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEC APNYRSGS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]