| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is engA
Identifier: 120598182
GI number: 120598182
Start: 1538913
End: 1540379
Strand: Direct
Name: engA
Synonym: Sputw3181_1359
Alternate gene names: 120598182
Gene position: 1538913-1540379 (Clockwise)
Preceding gene: 120598181
Following gene: 120598184
Centisome position: 32.68
GC content: 49.08
Gene sequence:
>1467_bases ATGATCCCTGTAGTGGCCCTTGTTGGTCGACCGAATGTCGGTAAATCCACCCTATTTAATCGTCTTACGCGTACGCGTGA TGCGCTGGTTGCTGACTTTCCTGGCCTAACACGTGACCGTAAATATGGTCGAGCATTCTTATCCGGCTATGAGTTCATTG TGGTCGATACTGGCGGTATCGATGGCACTGAAGAGGGGATCGAGACAAAAATGGCAGAGCAATCCCTTGCTGCCATTGAA GAGGCCGATGTCGTTCTATTTATGACCGATGCGCGCGCGGGGTTAACCGCCGCTGACTTGTCGATTGCACAGCATCTGCG TAGCCGTGAAAAAACCACTTTCGTGGTTGCCAATAAAGTTGACGGTATCGATGCCGATTCGGCCTGTGCCGAGTTTTGGT CTTTAGGTTTGGGTGAAGTCTACCAAATGGCGGCATCTCAAGGACGCGGCGTCACCAACATGATCGAATACGCGCTGACA CCTTATGCTGAAGCGATGGGCATTGAGCGTCAAGGTGAAGAAGAAGTCGTCGACGAACGCCAATACACTGAAGAAGAAGC TGAAGCTGAGCAAAAGCGTCTACAAGATTTGCCCATTAAGTTGGCGATTATCGGTAAGCCAAACGTAGGTAAGTCAACCC TCACTAACCGTATTTTGGGTGAAGAACGGGTCGTTGTGTACGATGAACCCGGCACAACGCGCGACAGTATTTACATTCCA ATGGAACGTGAAGGTCGCGAGTACGTGATTATCGATACCGCGGGTGTTCGCCGCCGCAGTAAAGTGCATCAAGTTATTGA AAAGTTCTCAGTGATCAAGACTTTAAAAGCGGTTGAAGATGCCAACGTGGTTTTACTTATCATCGATGCCCGTGAAGGGG TTGCTGAACAAGATTTAGGTCTATTAGGTTTCGCGCTTAATGCAGGACGTGCCTTAGTGATTGCCGTCAACAAGTGGGAT GGCATCGATCAAGGGATTAAAGATCGTGTGAAGAGTGAGCTTGACCGTCGTCTTGGGTTTATTGATTTTGCCCGTATTCA CTTTATTTCGGCGCTGCACGGTACTGGTGTTGGCCATTTATTTGAATCGATTGAAGAAGCCTATGACAGTGCCACACGCC GCGTCAGCACTTCTATGCTGACCCGTATTATGCAAATGTCCCAGGACGATCACCAGCCACCATTAGTGAATGGCCGCCGT GTGAAGCTTAAATACGCTCACGTCGGTGGTTACAATCCGCCAATCGTGGTGATCCACGGGAACCAAGTGAGTAGACTGCC TGACTCGTACAAGCGTTACATGATGAACTACTTCCGTCGTTCATTGAAAGTGGTGGGTACGCCTATTCAGCTGCGTTTCC AAGAGGGTGATAACCCATTTGAAAACAAGACTGAGAAGTTAACCATGAGCCAAGAGCGTCGCCGCAAACGCGCACTGAGC CATATTAAAGACAGAAAAACCAAATAG
Upstream 100 bases:
>100_bases GCTGTTGTAACACTTCCGTAGTTAAAAGTGTTATCCTTGCAGAGCCCCTGGAAGTGTGTTCCGGGGGCTTTTTATTGAAA AGTTTTTTAGAGGCAAAATC
Downstream 100 bases:
>100_bases TGTTTTTTACCGAACACATTTGAAACAAAAGGAACCTTAGGGTTCCTTTTGTGTTTTAAGACGATTTCAGCCTTGCTTAG CCTTATTCGAATGGCTTTAT
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA [H]
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGIDGTEEGIETKMAEQSLAAIE EADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANKVDGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALT PYAEAMGIERQGEEEVVDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIP MEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDAREGVAEQDLGLLGFALNAGRALVIAVNKWD GIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRR VKLKYAHVGGYNPPIVVIHGNQVSRLPDSYKRYMMNYFRRSLKVVGTPIQLRFQEGDNPFENKTEKLTMSQERRRKRALS HIKDRKTK
Sequences:
>Translated_488_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGIDGTEEGIETKMAEQSLAAIE EADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANKVDGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALT PYAEAMGIERQGEEEVVDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIP MEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDAREGVAEQDLGLLGFALNAGRALVIAVNKWD GIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRR VKLKYAHVGGYNPPIVVIHGNQVSRLPDSYKRYMMNYFRRSLKVVGTPIQLRFQEGDNPFENKTEKLTMSQERRRKRALS HIKDRKTK >Mature_488_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGIDGTEEGIETKMAEQSLAAIE EADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANKVDGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALT PYAEAMGIERQGEEEVVDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIP MEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDAREGVAEQDLGLLGFALNAGRALVIAVNKWD GIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRR VKLKYAHVGGYNPPIVVIHGNQVSRLPDSYKRYMMNYFRRSLKVVGTPIQLRFQEGDNPFENKTEKLTMSQERRRKRALS HIKDRKTK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis [H]
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain [H]
Homologues:
Organism=Escherichia coli, GI87082120, Length=490, Percent_Identity=71.0204081632653, Blast_Score=723, Evalue=0.0, Organism=Escherichia coli, GI2367268, Length=103, Percent_Identity=37.8640776699029, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323665, Length=144, Percent_Identity=34.0277777777778, Blast_Score=77, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 54677; Mature: 54677
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCC DGTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANKV CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECC DGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALTPYAEAMGIERQGEEEVVDER CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCCCCCHHHHHHHH QYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIP HHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEEEE MEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDAREGVAEQDLG ECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCC LLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHL CEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH FESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHVGGYNPPIVVIHG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEC NQVSRLPDSYKRYMMNYFRRSLKVVGTPIQLRFQEGDNPFENKTEKLTMSQERRRKRALS CCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH HIKDRKTK HHHHCCCC >Mature Secondary Structure MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCC DGTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANKV CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECC DGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALTPYAEAMGIERQGEEEVVDER CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCCCCCHHHHHHHH QYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIP HHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEEEE MEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDAREGVAEQDLG ECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCC LLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHL CEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH FESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHVGGYNPPIVVIHG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEC NQVSRLPDSYKRYMMNYFRRSLKVVGTPIQLRFQEGDNPFENKTEKLTMSQERRRKRALS CCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH HIKDRKTK HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA