Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597986

Identifier: 120597986

GI number: 120597986

Start: 1312873

End: 1313580

Strand: Direct

Name: 120597986

Synonym: Sputw3181_1163

Alternate gene names: NA

Gene position: 1312873-1313580 (Clockwise)

Preceding gene: 120597985

Following gene: 120597987

Centisome position: 27.88

GC content: 45.76

Gene sequence:

>708_bases
ATGATGGTATTAACCCTGTTAACAAAGCAGATTGATGGTGAGTTTACGGTTTACTGGAAGACCGGCCTTCGAAGAGGTGG
TGAGCTAAAGGTCGATTTAGGTGAGCAATACGACAAGCTACCTGAGCAGCAAAAGCCAATTGCAGCTGAGGTTTATGCTA
TTCATCACCTACTGTCAGTGAAAGAGGTGATGGGGAGTAACCGAAGCGGTAATGGGCTTCAAATCCGGGTCAGTAAAGGA
GCCATCAAAAAGTTACAGAAACAACGCTCAACTCAGCATTCACTTTACAGCCTGACTAGGTTCTTGCTCACCCGCTACCA
AGAAGCACAGATATCGGTAGAAAAACGGGAAGAATGGCTCTCCCATTCCTTCGAAGAATACTGCGTCGATAATGCTACCG
TGAGAGAAATCGATGAGGTCATCAATGTGCCAAGTATTGGGCCTGTCGTGGTGACTCGTCATGCACAGGAACGGTTTGTG
GAACGGCTTTCAGACGGTGTACCTAAGCATCCTTGGAAGGCTTTGTGCTCAAAGCTGCTATGTTCTGCGCTAACTAAAGC
CCAGTTACCAGAAAGCGTCACTATCCAAAAAGCAAAAAAATATGCACAAGAGGCCGAGTTCTGGCAATACATGGGGAGCA
AGATGTACTTTGTTATGGTTCCAAGTGGCTCAATTAAAACTTTGGTTACGGTTTTTGCAGTTAAGTGA

Upstream 100 bases:

>100_bases
TTCATATCTGATCCAAGGGGCTTCGGCCCCTTTTTTTGCGCCTTGCATATTTGAAAAAACATGGAGAATGAAAAATAGAT
AACCAATAGGAGAAACAAAT

Downstream 100 bases:

>100_bases
GCTAATGTAGTATTCGCACTTTATGAATATTACTTATGTGCCAAAAGCGGACATCACTATTTTAATCAATCACAACTCAA
GTTTTTTTACATATTGCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MMVLTLLTKQIDGEFTVYWKTGLRRGGELKVDLGEQYDKLPEQQKPIAAEVYAIHHLLSVKEVMGSNRSGNGLQIRVSKG
AIKKLQKQRSTQHSLYSLTRFLLTRYQEAQISVEKREEWLSHSFEEYCVDNATVREIDEVINVPSIGPVVVTRHAQERFV
ERLSDGVPKHPWKALCSKLLCSALTKAQLPESVTIQKAKKYAQEAEFWQYMGSKMYFVMVPSGSIKTLVTVFAVK

Sequences:

>Translated_235_residues
MMVLTLLTKQIDGEFTVYWKTGLRRGGELKVDLGEQYDKLPEQQKPIAAEVYAIHHLLSVKEVMGSNRSGNGLQIRVSKG
AIKKLQKQRSTQHSLYSLTRFLLTRYQEAQISVEKREEWLSHSFEEYCVDNATVREIDEVINVPSIGPVVVTRHAQERFV
ERLSDGVPKHPWKALCSKLLCSALTKAQLPESVTIQKAKKYAQEAEFWQYMGSKMYFVMVPSGSIKTLVTVFAVK
>Mature_235_residues
MMVLTLLTKQIDGEFTVYWKTGLRRGGELKVDLGEQYDKLPEQQKPIAAEVYAIHHLLSVKEVMGSNRSGNGLQIRVSKG
AIKKLQKQRSTQHSLYSLTRFLLTRYQEAQISVEKREEWLSHSFEEYCVDNATVREIDEVINVPSIGPVVVTRHAQERFV
ERLSDGVPKHPWKALCSKLLCSALTKAQLPESVTIQKAKKYAQEAEFWQYMGSKMYFVMVPSGSIKTLVTVFAVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26792; Mature: 26792

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVLTLLTKQIDGEFTVYWKTGLRRGGELKVDLGEQYDKLPEQQKPIAAEVYAIHHLLSV
CCHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHH
KEVMGSNRSGNGLQIRVSKGAIKKLQKQRSTQHSLYSLTRFLLTRYQEAQISVEKREEWL
HHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHSFEEYCVDNATVREIDEVINVPSIGPVVVTRHAQERFVERLSDGVPKHPWKALCSKLL
HHHHHHHHCCCCHHHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHCCCCCCCHHHHHHHHH
CSALTKAQLPESVTIQKAKKYAQEAEFWQYMGSKMYFVMVPSGSIKTLVTVFAVK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCC
>Mature Secondary Structure
MMVLTLLTKQIDGEFTVYWKTGLRRGGELKVDLGEQYDKLPEQQKPIAAEVYAIHHLLSV
CCHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHH
KEVMGSNRSGNGLQIRVSKGAIKKLQKQRSTQHSLYSLTRFLLTRYQEAQISVEKREEWL
HHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHSFEEYCVDNATVREIDEVINVPSIGPVVVTRHAQERFVERLSDGVPKHPWKALCSKLL
HHHHHHHHCCCCHHHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHCCCCCCCHHHHHHHHH
CSALTKAQLPESVTIQKAKKYAQEAEFWQYMGSKMYFVMVPSGSIKTLVTVFAVK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA