Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

Click here to switch to the map view.

The map label for this gene is 120597987

Identifier: 120597987

GI number: 120597987

Start: 1313953

End: 1314363

Strand: Direct

Name: 120597987

Synonym: Sputw3181_1164

Alternate gene names: NA

Gene position: 1313953-1314363 (Clockwise)

Preceding gene: 120597986

Following gene: 120597993

Centisome position: 27.91

GC content: 44.04

Gene sequence:

>411_bases
ATGAATAAAAAAATTAAACATGAGTACCAAATCAGTATGCGCTCAGCCATGGAGGCTGAACAAGTCAATGATTTAGACAA
TGCGTTTAAGTCTCTTGAAAGAGCGCATATTTTAGGGCAGAGATATTTTATACCGCACATAGCGACGCACTGGCAGATGT
TACGAATTGGGCTTAAACGCAATGATAATCGCGAGGTTATTGGTCAGATCGTCCGTTTGATAGCAACGGTTCCGGGTTTT
ATATTTGGTTGGGTTCCAAGGGGAAATCCTGGAGGCGCGAATATCTCTGCTTTAAAGCCAGTGCCCTTGCCAGCTGACTT
GCAACCCTTGCTAGCTGACAGCCCCATTTGGCGGGACGTCTTAATACGCCTGACTATTTACGCGGTTATCGTTTTAATCG
TATTAGCATAA

Upstream 100 bases:

>100_bases
TAAGCTTTAATTTAATAATCAGTGATATGCTTCGCGTCTCTTATTTAGCGATCGAGGATTGCTCTTTTCTTTCGCAGACT
CATTATCTTAGTGATAGTAA

Downstream 100 bases:

>100_bases
ACACCCATACTATTGCCAAAACGTTCTTCGCTGCAGCCCAATGCTGCAGCGAAGCAGGTTAATGATTATTCCGTTTGCTG
TTTGCGGTTATCGTTTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MNKKIKHEYQISMRSAMEAEQVNDLDNAFKSLERAHILGQRYFIPHIATHWQMLRIGLKRNDNREVIGQIVRLIATVPGF
IFGWVPRGNPGGANISALKPVPLPADLQPLLADSPIWRDVLIRLTIYAVIVLIVLA

Sequences:

>Translated_136_residues
MNKKIKHEYQISMRSAMEAEQVNDLDNAFKSLERAHILGQRYFIPHIATHWQMLRIGLKRNDNREVIGQIVRLIATVPGF
IFGWVPRGNPGGANISALKPVPLPADLQPLLADSPIWRDVLIRLTIYAVIVLIVLA
>Mature_136_residues
MNKKIKHEYQISMRSAMEAEQVNDLDNAFKSLERAHILGQRYFIPHIATHWQMLRIGLKRNDNREVIGQIVRLIATVPGF
IFGWVPRGNPGGANISALKPVPLPADLQPLLADSPIWRDVLIRLTIYAVIVLIVLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15384; Mature: 15384

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKIKHEYQISMRSAMEAEQVNDLDNAFKSLERAHILGQRYFIPHIATHWQMLRIGLKR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDNREVIGQIVRLIATVPGFIFGWVPRGNPGGANISALKPVPLPADLQPLLADSPIWRDV
CCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHH
LIRLTIYAVIVLIVLA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKKIKHEYQISMRSAMEAEQVNDLDNAFKSLERAHILGQRYFIPHIATHWQMLRIGLKR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDNREVIGQIVRLIATVPGFIFGWVPRGNPGGANISALKPVPLPADLQPLLADSPIWRDV
CCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHH
LIRLTIYAVIVLIVLA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA