Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is foxA [H]

Identifier: 120597852

GI number: 120597852

Start: 1166669

End: 1168813

Strand: Direct

Name: foxA [H]

Synonym: Sputw3181_1022

Alternate gene names: 120597852

Gene position: 1166669-1168813 (Clockwise)

Preceding gene: 120597851

Following gene: 120597853

Centisome position: 24.78

GC content: 43.92

Gene sequence:

>2145_bases
ATGACTTATTTAGCTTTCCCAAAGCGCGTAGCGCTTTTACTGGGCGCTTTCGTTGCGTTCAATTCTCCAATGGTGTTTGC
CGCGAAGGAGCTTCAATCGAATGAACAAATTACCGATTCAGATATTGAGCGTTTAAGTATCCATTATCGTCAAGCCTACC
GTGGTAATGTACCCGCAGAGGCACTTCCCCAAGCGATTAGTGTGCTGGATGAACAATTAATAAAAGATGCGGGCCTGACA
AGGTTTCAGGATGTTCTGGATTATTCTGCCAGTGTAGCGCGGCAAAATAATGGTGGTGGTTTATGGGATAGTTTTTCTTT
GCGCGGTTTTCCGGGCAATGAAAATATGCCATCGGGTTATTTAATTAATGGCTTTAATGGTGGACGAGGCTTTAGTGGCC
ATAGGGATTTGTCTAATGTCGCCTATGTGGAAATATTAAAAGGCCCAGGTTCTGCGCTTTATGGGCGTTCTGAACCTGGT
GGCACAGTCAATATCGTGACTAAGAAACCCCAATATGAAAGCAGTGGTTATTTAAAGGCATCGGCTGGGAGTTTCGACCA
ATATCGGTTAGAAGGCGATGTTACCTCTGGTTTAACCGAGTCTGTGGCGTTTCGGATCAATGGCGCTTGGCAGGAATACG
ATAGTTTTCGTGATTATGTGTTTAGTGATAAGAAAATCGTTACGCCTTCTGTACGTTGGCAGGTTTCCGATAAAGCCTCA
TTACTCTATGAGCTTGAGTATCTTAAACAGGAGCAGTTATTTGACCGCGGTTTTATCGTACTCAATAACGATATCAAGAC
AGTGCCGCGTTCACGTTATCTAGGTGAGCCTAATGATGGCGCAACGAAGGTGAATGCCACTGGGCATCAACTGACCTATG
ACTATGAATTAAATGATGATTGGTCATTAACGGCGGGTTATAACTATCGCGATTCCACCTTAAAGGGATTTTCCTCCGAT
GCTGAGCTGGCAGCGGGGCGTCAATCCTTGTTTGATGATGGCCGAACACTGACTCGCCAGCATCGATATAGGGATTATGC
CTCAGAGGATAATTCCCTTCGTCTTGAATTAAGTGGTCATCTTGATACGGGTTTTATTCGTCATAATTTGCTGCTTGGTG
CCGATGCCTACCACTACAACCTGAAGACGGGGCTTTATCGCTATCGAGGCAAAAAAGGCGAATATGCCATCGATATTTTT
GAGCCGCAATATGGCAGCGTTCAACCTGAGGTAAGTTTACTGTATGAGAATGAGGAAACTCAGAAGGCATGGGGCACTTA
TCTTCAAGATCAAATGGATTTAACTGAAAAGTGGAAATTACATTTAGGACTGAGGTTTGATAGTTATCAGCAAGATATTC
GTGAAACGGCTAAAGAGACGCTATCGGAACAAACCGATAATCGGGTTAGCCCTAAAGTGGGTCTCGTCTATTTGTGGTCA
GATGCATTAAATTTTTATAGTTCTTACTCTGAAGGATTTTTACCGCTTTCAGGAACTGACTATGCGGGGAATCCATTTGA
AGCTGAAGAAAGTCAATCTGTAGAGCTGGGCATGAAGTTTAATGCTGCTTGGCTTAACGACCTTGCCATAAATGGTAGTT
TAGCCGTGTTTGATGCCAAAAAGAGCAATATTTTAACCTCAGATCCTGTGAATGTAGGGTTTTCGGCTACTTTGGGGGAA
GCGAAAAGTACAGGACTTGAATTAGATATCGCGGCCGATCTGACTGAGTCATTACAAGGCAGACTATCCTATGCCTATCT
TAATACGCGTACAGCCAACGATACTTTGAATGTTGACTTTGGCGTACAAATACCCGCAGGAAGTCCACTGGTTAACGTGC
CTAAACAAACCGCAAGTATTCTGTTGAAACAAGATCTCAATGATTTTTCCATTGATGGGCATTTGGGATTAAGTTGGCGC
TATATTGATTCGCGCCTCGGCGATTCTGCCGATCCTAGCTTTCAATTGCCTTCTTATCAGTTAGTTGGGTTGTTTATGAA
CACCCACTTAAGCGACAACTTAAGCCTTGGTGTGAATCTGGATAACTTACTGGATGAACATTACATCGCGAGTAGCTATT
CCGCTCTTTGGGCCGTGCCGGGTGAGCCACGTAGCATTAAAGTGAGTGTCAGCTATGAATTCTAA

Upstream 100 bases:

>100_bases
CCGATAACAGCTTAATTTTCTGATTAAATTCATTAATTTATTGATTTTGTAGTGTCTTGGTTTTACTAAGGCGCTGATGC
TGTTTATTTTCGGAGTGAAA

Downstream 100 bases:

>100_bases
TATCAGTGCTAATCCAGCGTTATCTTCAGGTTTTACCGAGCAAGAACGGGGTCATTCTATTGGCCGCACCCGGATCAATA
GTATCGATATGATGCGCGGT

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 714; Mature: 713

Protein sequence:

>714_residues
MTYLAFPKRVALLLGAFVAFNSPMVFAAKELQSNEQITDSDIERLSIHYRQAYRGNVPAEALPQAISVLDEQLIKDAGLT
RFQDVLDYSASVARQNNGGGLWDSFSLRGFPGNENMPSGYLINGFNGGRGFSGHRDLSNVAYVEILKGPGSALYGRSEPG
GTVNIVTKKPQYESSGYLKASAGSFDQYRLEGDVTSGLTESVAFRINGAWQEYDSFRDYVFSDKKIVTPSVRWQVSDKAS
LLYELEYLKQEQLFDRGFIVLNNDIKTVPRSRYLGEPNDGATKVNATGHQLTYDYELNDDWSLTAGYNYRDSTLKGFSSD
AELAAGRQSLFDDGRTLTRQHRYRDYASEDNSLRLELSGHLDTGFIRHNLLLGADAYHYNLKTGLYRYRGKKGEYAIDIF
EPQYGSVQPEVSLLYENEETQKAWGTYLQDQMDLTEKWKLHLGLRFDSYQQDIRETAKETLSEQTDNRVSPKVGLVYLWS
DALNFYSSYSEGFLPLSGTDYAGNPFEAEESQSVELGMKFNAAWLNDLAINGSLAVFDAKKSNILTSDPVNVGFSATLGE
AKSTGLELDIAADLTESLQGRLSYAYLNTRTANDTLNVDFGVQIPAGSPLVNVPKQTASILLKQDLNDFSIDGHLGLSWR
YIDSRLGDSADPSFQLPSYQLVGLFMNTHLSDNLSLGVNLDNLLDEHYIASSYSALWAVPGEPRSIKVSVSYEF

Sequences:

>Translated_714_residues
MTYLAFPKRVALLLGAFVAFNSPMVFAAKELQSNEQITDSDIERLSIHYRQAYRGNVPAEALPQAISVLDEQLIKDAGLT
RFQDVLDYSASVARQNNGGGLWDSFSLRGFPGNENMPSGYLINGFNGGRGFSGHRDLSNVAYVEILKGPGSALYGRSEPG
GTVNIVTKKPQYESSGYLKASAGSFDQYRLEGDVTSGLTESVAFRINGAWQEYDSFRDYVFSDKKIVTPSVRWQVSDKAS
LLYELEYLKQEQLFDRGFIVLNNDIKTVPRSRYLGEPNDGATKVNATGHQLTYDYELNDDWSLTAGYNYRDSTLKGFSSD
AELAAGRQSLFDDGRTLTRQHRYRDYASEDNSLRLELSGHLDTGFIRHNLLLGADAYHYNLKTGLYRYRGKKGEYAIDIF
EPQYGSVQPEVSLLYENEETQKAWGTYLQDQMDLTEKWKLHLGLRFDSYQQDIRETAKETLSEQTDNRVSPKVGLVYLWS
DALNFYSSYSEGFLPLSGTDYAGNPFEAEESQSVELGMKFNAAWLNDLAINGSLAVFDAKKSNILTSDPVNVGFSATLGE
AKSTGLELDIAADLTESLQGRLSYAYLNTRTANDTLNVDFGVQIPAGSPLVNVPKQTASILLKQDLNDFSIDGHLGLSWR
YIDSRLGDSADPSFQLPSYQLVGLFMNTHLSDNLSLGVNLDNLLDEHYIASSYSALWAVPGEPRSIKVSVSYEF
>Mature_713_residues
TYLAFPKRVALLLGAFVAFNSPMVFAAKELQSNEQITDSDIERLSIHYRQAYRGNVPAEALPQAISVLDEQLIKDAGLTR
FQDVLDYSASVARQNNGGGLWDSFSLRGFPGNENMPSGYLINGFNGGRGFSGHRDLSNVAYVEILKGPGSALYGRSEPGG
TVNIVTKKPQYESSGYLKASAGSFDQYRLEGDVTSGLTESVAFRINGAWQEYDSFRDYVFSDKKIVTPSVRWQVSDKASL
LYELEYLKQEQLFDRGFIVLNNDIKTVPRSRYLGEPNDGATKVNATGHQLTYDYELNDDWSLTAGYNYRDSTLKGFSSDA
ELAAGRQSLFDDGRTLTRQHRYRDYASEDNSLRLELSGHLDTGFIRHNLLLGADAYHYNLKTGLYRYRGKKGEYAIDIFE
PQYGSVQPEVSLLYENEETQKAWGTYLQDQMDLTEKWKLHLGLRFDSYQQDIRETAKETLSEQTDNRVSPKVGLVYLWSD
ALNFYSSYSEGFLPLSGTDYAGNPFEAEESQSVELGMKFNAAWLNDLAINGSLAVFDAKKSNILTSDPVNVGFSATLGEA
KSTGLELDIAADLTESLQGRLSYAYLNTRTANDTLNVDFGVQIPAGSPLVNVPKQTASILLKQDLNDFSIDGHLGLSWRY
IDSRLGDSADPSFQLPSYQLVGLFMNTHLSDNLSLGVNLDNLLDEHYIASSYSALWAVPGEPRSIKVSVSYEF

Specific function: Ferrioxamine binding and uptake, in association with the tonB protein. May play a role in intestinal colonization [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=706, Percent_Identity=24.929178470255, Blast_Score=169, Evalue=7e-43,
Organism=Escherichia coli, GI1787024, Length=740, Percent_Identity=21.8918918918919, Blast_Score=96, Evalue=1e-20,
Organism=Escherichia coli, GI1787723, Length=605, Percent_Identity=24.1322314049587, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787344, Length=302, Percent_Identity=24.5033112582781, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 79577; Mature: 79446

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYLAFPKRVALLLGAFVAFNSPMVFAAKELQSNEQITDSDIERLSIHYRQAYRGNVPAE
CCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHH
ALPQAISVLDEQLIKDAGLTRFQDVLDYSASVARQNNGGGLWDSFSLRGFPGNENMPSGY
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCCEECCCCCCCCCCCCE
LINGFNGGRGFSGHRDLSNVAYVEILKGPGSALYGRSEPGGTVNIVTKKPQYESSGYLKA
EEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
SAGSFDQYRLEGDVTSGLTESVAFRINGAWQEYDSFRDYVFSDKKIVTPSVRWQVSDKAS
CCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEECCCEEEEECCHHH
LLYELEYLKQEQLFDRGFIVLNNDIKTVPRSRYLGEPNDGATKVNATGHQLTYDYELNDD
HHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCCCCEEEECCCCEEEEEEECCCC
WSLTAGYNYRDSTLKGFSSDAELAAGRQSLFDDGRTLTRQHRYRDYASEDNSLRLELSGH
EEEEECCCCCCCHHCCCCCCHHHHHCHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECC
LDTGFIRHNLLLGADAYHYNLKTGLYRYRGKKGEYAIDIFEPQYGSVQPEVSLLYENEET
CCCCEEEEEEEEECCEEEEEHHHHHHEECCCCCCEEEEEECCCCCCCCCCEEEEEECCHH
QKAWGTYLQDQMDLTEKWKLHLGLRFDSYQQDIRETAKETLSEQTDNRVSPKVGLVYLWS
HHHHHHHHHHHHCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEH
DALNFYSSYSEGFLPLSGTDYAGNPFEAEESQSVELGMKFNAAWLNDLAINGSLAVFDAK
HHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEHEEEEECCCEEEEECC
KSNILTSDPVNVGFSATLGEAKSTGLELDIAADLTESLQGRLSYAYLNTRTANDTLNVDF
CCCCEECCCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHCCEEEEEEEEECCCCEEEEEE
GVQIPAGSPLVNVPKQTASILLKQDLNDFSIDGHLGLSWRYIDSRLGDSADPSFQLPSYQ
EEECCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCEEEEEEHHHCCCCCCCCCCCCCCE
LVGLFMNTHLSDNLSLGVNLDNLLDEHYIASSYSALWAVPGEPRSIKVSVSYEF
EEEEEECCCCCCCCEEECCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEECC
>Mature Secondary Structure 
TYLAFPKRVALLLGAFVAFNSPMVFAAKELQSNEQITDSDIERLSIHYRQAYRGNVPAE
CCCCCHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHH
ALPQAISVLDEQLIKDAGLTRFQDVLDYSASVARQNNGGGLWDSFSLRGFPGNENMPSGY
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCCEECCCCCCCCCCCCE
LINGFNGGRGFSGHRDLSNVAYVEILKGPGSALYGRSEPGGTVNIVTKKPQYESSGYLKA
EEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
SAGSFDQYRLEGDVTSGLTESVAFRINGAWQEYDSFRDYVFSDKKIVTPSVRWQVSDKAS
CCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEECCCEEEEECCHHH
LLYELEYLKQEQLFDRGFIVLNNDIKTVPRSRYLGEPNDGATKVNATGHQLTYDYELNDD
HHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCCCCEEEECCCCEEEEEEECCCC
WSLTAGYNYRDSTLKGFSSDAELAAGRQSLFDDGRTLTRQHRYRDYASEDNSLRLELSGH
EEEEECCCCCCCHHCCCCCCHHHHHCHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECC
LDTGFIRHNLLLGADAYHYNLKTGLYRYRGKKGEYAIDIFEPQYGSVQPEVSLLYENEET
CCCCEEEEEEEEECCEEEEEHHHHHHEECCCCCCEEEEEECCCCCCCCCCEEEEEECCHH
QKAWGTYLQDQMDLTEKWKLHLGLRFDSYQQDIRETAKETLSEQTDNRVSPKVGLVYLWS
HHHHHHHHHHHHCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEH
DALNFYSSYSEGFLPLSGTDYAGNPFEAEESQSVELGMKFNAAWLNDLAINGSLAVFDAK
HHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEHEEEEECCCEEEEECC
KSNILTSDPVNVGFSATLGEAKSTGLELDIAADLTESLQGRLSYAYLNTRTANDTLNVDF
CCCCEECCCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHCCEEEEEEEEECCCCEEEEEE
GVQIPAGSPLVNVPKQTASILLKQDLNDFSIDGHLGLSWRYIDSRLGDSADPSFQLPSYQ
EEECCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCEEEEEEHHHCCCCCCCCCCCCCCE
LVGLFMNTHLSDNLSLGVNLDNLLDEHYIASSYSALWAVPGEPRSIKVSVSYEF
EEEEEECCCCCCCCEEECCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609; 10103258; 7642488 [H]