| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597851
Identifier: 120597851
GI number: 120597851
Start: 1166293
End: 1166583
Strand: Direct
Name: 120597851
Synonym: Sputw3181_1021
Alternate gene names: NA
Gene position: 1166293-1166583 (Clockwise)
Preceding gene: 120597849
Following gene: 120597852
Centisome position: 24.77
GC content: 42.61
Gene sequence:
>291_bases TTGAACAGTGTGATGCACACAAGACGCACCTTAGCGATATGGCTTGTTGCCATATTGGTGCTATTGTCTGTGGCTTCGGC TGTTCACAGTGTTTCCCATTTAAAAGATGACTCAACAACCCATTGTGCGCTTTGCTTACATCAACACCAAACACAACATG CGTTAACGAGTACACCCTTTCATTTCCAACTGTCTCAACAAAGCTATATCCGCGTTGAGTTTCAAGTCGTTTCCTTTGAA CAACTGTTTAGTCGTTTCTTTAATAGTCGTGCACCACCGATAACAGCTTAA
Upstream 100 bases:
>100_bases CTCTTGTAACATTTGTGCCCTGTGTCTTAGGTAAATCGATTTGCAACTTTAGTTGTTCTTAACATACAATCGCCTGCCAA ATTATGTGAGGAAGTATGGT
Downstream 100 bases:
>100_bases TTTTCTGATTAAATTCATTAATTTATTGATTTTGTAGTGTCTTGGTTTTACTAAGGCGCTGATGCTGTTTATTTTCGGAG TGAAAATGACTTATTTAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MNSVMHTRRTLAIWLVAILVLLSVASAVHSVSHLKDDSTTHCALCLHQHQTQHALTSTPFHFQLSQQSYIRVEFQVVSFE QLFSRFFNSRAPPITA
Sequences:
>Translated_96_residues MNSVMHTRRTLAIWLVAILVLLSVASAVHSVSHLKDDSTTHCALCLHQHQTQHALTSTPFHFQLSQQSYIRVEFQVVSFE QLFSRFFNSRAPPITA >Mature_96_residues MNSVMHTRRTLAIWLVAILVLLSVASAVHSVSHLKDDSTTHCALCLHQHQTQHALTSTPFHFQLSQQSYIRVEFQVVSFE QLFSRFFNSRAPPITA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10918; Mature: 10918
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVMHTRRTLAIWLVAILVLLSVASAVHSVSHLKDDSTTHCALCLHQHQTQHALTSTPF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC HFQLSQQSYIRVEFQVVSFEQLFSRFFNSRAPPITA EEEECCCCEEEEEEEEECHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNSVMHTRRTLAIWLVAILVLLSVASAVHSVSHLKDDSTTHCALCLHQHQTQHALTSTPF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC HFQLSQQSYIRVEFQVVSFEQLFSRFFNSRAPPITA EEEECCCCEEEEEEEEECHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA