| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is ywrD [H]
Identifier: 119946076
GI number: 119946076
Start: 2973032
End: 2974603
Strand: Reverse
Name: ywrD [H]
Synonym: Ping_2425
Alternate gene names: 119946076
Gene position: 2974603-2973032 (Counterclockwise)
Preceding gene: 119946077
Following gene: 119946075
Centisome position: 65.24
GC content: 46.5
Gene sequence:
>1572_bases ATGAACTATCAATCAGCATTTAGCGCATCGCATTATCAAGCCACTCAAACAGGTCAAGCTATATTAGATGCAGGAGGCAC TGCAAGCGAAGCGATGGTTGCAGCCGCTGCAATGATCACCGTGCAATATCCGCATATGAACAGTATTGGCGGAGATAGTT TTTGGCTGATTTGCCATCCGGGCAAAGCACCGATTGCTATTGATGCCTGTGGTGCGGCGAGCCATTCTATTGATGTAAAT GCCTACCGTGCCAAGGGCGGTGAACTGCCCGAGAGCGGTGGCGAATCGGCTATTACTATGGCCGGTACTATCTCGGGCTG GCAAAAAGCATTGCAGATTAACGGCGGTCAGCATTCACTCAGTGAACTGCTTAAGCCTGCTATAGAGGCTGCTGAACAGG GTATTGAAGTGACGCAAAGTTTTGTTGACGCCAGTGAAAAAACCTTCGATCGTCTGCACGCACTTGATGATTTTGCCAAT CTTTTTTTAAATCAGTCCAAAACCTTAAAAGTAGGTGACAATTTAGTTAACCCGGAGCTTGCTGCAACGTTAACTCGTCT TGGCGAAGTGGGATTAGATGACTTTTACCGTGGTGAAATCGCAGAAAAAGCGGCACTGGATTTAAGTAAAGCCGGCAGCC CGATTACGCTCGATGATTTTCATATCCATCGGGTAAAAGTGATGGAGCCACTGACGGTGGAAATATCCAAAGGACAATTA TATAACTTTGGTGCACCGACTCAGGGACTGGCTTCGCTGTTGATTATCGCTATTTATGATCAACTGGTAAGTACCACCGG TAATGAATTTGAGCACATGCATTTGCTGGTTGAAGCAACCAAACAGGCATTTATTATTCGTGACCGATTGATTACCGATG AGGCCTGTTTAAGCCAACCATTACAAGATTTACTCAGTGAAAAAATGATTCGTGAGTGTGCCGATCGTATCTCATTAGAG AAAGCACAACCTTGGCCGCATCAGGCAAAAGTGGGTGATACGGTTTGGATGGGAGCGACGGACAAGTACGGTACTATGGT GAGCTTTATTCAAAGTATCTATTGGGAATTTGGTTCGGGAGTGGTATTACCAAGCACCGGTATTTTATGGAATATCCGCG GCAAAAGTTTCTCCCTTGATGCCGATCACCATAATGTTTTAGCGCCAGGTAAAAAACCCTTTCATACCCTTAATCCTGCC TATGCAGAGCTGCATGATGGCAGGCGCATGGTGTATGGAACCATGGGCGGTGAAGGGCAGCCGCAGACTCAAGCCTGTCT GTTTAGCCGTTATATCTATCAAGGGTTGAATCTCCAGGATGCGATCGCAAAACCGCGTTGGTTACTGGGCCGCACTTGGG GAGATACGACCAATAATTTACGTTTAGAATACAGCCTTTATAAAGCTCACGCGGCGCAGCTAAGTAAGCTTGGTCATGAC GTCACTTATGTGACAGATAATAATGAATTAATGGGGCACGCCGGTGCAATTGTTATAGACTCGCAAGGTCTAGCCTGTGC AAGCAGCGATCCCCGCAGTGATGGAAGCAGTTTACTTGGAGATGTTTTATGA
Upstream 100 bases:
>100_bases GCCTAGAAGAAGGGCCCTGCGGAATATCACTGTTAGGTCTGCCGGACAGTGAAGGAGATCTGTTCGCTACCGCGCAACAG TTAATTCAAGGAAAACAATT
Downstream 100 bases:
>100_bases GCACCAGCGACCTTTTTGAAACCCTTGATCCACCGCAGCGTTTACTAATGGGGCCTGGCCCAATTAATGCTTATCCGCGT GTACATCAAGCTATTTCAGC
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MNYQSAFSASHYQATQTGQAILDAGGTASEAMVAAAAMITVQYPHMNSIGGDSFWLICHPGKAPIAIDACGAASHSIDVN AYRAKGGELPESGGESAITMAGTISGWQKALQINGGQHSLSELLKPAIEAAEQGIEVTQSFVDASEKTFDRLHALDDFAN LFLNQSKTLKVGDNLVNPELAATLTRLGEVGLDDFYRGEIAEKAALDLSKAGSPITLDDFHIHRVKVMEPLTVEISKGQL YNFGAPTQGLASLLIIAIYDQLVSTTGNEFEHMHLLVEATKQAFIIRDRLITDEACLSQPLQDLLSEKMIRECADRISLE KAQPWPHQAKVGDTVWMGATDKYGTMVSFIQSIYWEFGSGVVLPSTGILWNIRGKSFSLDADHHNVLAPGKKPFHTLNPA YAELHDGRRMVYGTMGGEGQPQTQACLFSRYIYQGLNLQDAIAKPRWLLGRTWGDTTNNLRLEYSLYKAHAAQLSKLGHD VTYVTDNNELMGHAGAIVIDSQGLACASSDPRSDGSSLLGDVL
Sequences:
>Translated_523_residues MNYQSAFSASHYQATQTGQAILDAGGTASEAMVAAAAMITVQYPHMNSIGGDSFWLICHPGKAPIAIDACGAASHSIDVN AYRAKGGELPESGGESAITMAGTISGWQKALQINGGQHSLSELLKPAIEAAEQGIEVTQSFVDASEKTFDRLHALDDFAN LFLNQSKTLKVGDNLVNPELAATLTRLGEVGLDDFYRGEIAEKAALDLSKAGSPITLDDFHIHRVKVMEPLTVEISKGQL YNFGAPTQGLASLLIIAIYDQLVSTTGNEFEHMHLLVEATKQAFIIRDRLITDEACLSQPLQDLLSEKMIRECADRISLE KAQPWPHQAKVGDTVWMGATDKYGTMVSFIQSIYWEFGSGVVLPSTGILWNIRGKSFSLDADHHNVLAPGKKPFHTLNPA YAELHDGRRMVYGTMGGEGQPQTQACLFSRYIYQGLNLQDAIAKPRWLLGRTWGDTTNNLRLEYSLYKAHAAQLSKLGHD VTYVTDNNELMGHAGAIVIDSQGLACASSDPRSDGSSLLGDVL >Mature_523_residues MNYQSAFSASHYQATQTGQAILDAGGTASEAMVAAAAMITVQYPHMNSIGGDSFWLICHPGKAPIAIDACGAASHSIDVN AYRAKGGELPESGGESAITMAGTISGWQKALQINGGQHSLSELLKPAIEAAEQGIEVTQSFVDASEKTFDRLHALDDFAN LFLNQSKTLKVGDNLVNPELAATLTRLGEVGLDDFYRGEIAEKAALDLSKAGSPITLDDFHIHRVKVMEPLTVEISKGQL YNFGAPTQGLASLLIIAIYDQLVSTTGNEFEHMHLLVEATKQAFIIRDRLITDEACLSQPLQDLLSEKMIRECADRISLE KAQPWPHQAKVGDTVWMGATDKYGTMVSFIQSIYWEFGSGVVLPSTGILWNIRGKSFSLDADHHNVLAPGKKPFHTLNPA YAELHDGRRMVYGTMGGEGQPQTQACLFSRYIYQGLNLQDAIAKPRWLLGRTWGDTTNNLRLEYSLYKAHAAQLSKLGHD VTYVTDNNELMGHAGAIVIDSQGLACASSDPRSDGSSLLGDVL
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=470, Percent_Identity=25.9574468085106, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI73915090, Length=470, Percent_Identity=25.9574468085106, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI73915096, Length=470, Percent_Identity=25.9574468085106, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI73915094, Length=470, Percent_Identity=25.9574468085106, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI113429324, Length=469, Percent_Identity=25.3731343283582, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI113429326, Length=476, Percent_Identity=24.7899159663866, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI153266885, Length=474, Percent_Identity=25.3164556962025, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI153266901, Length=475, Percent_Identity=25.6842105263158, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI109148539, Length=516, Percent_Identity=25.1937984496124, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1789856, Length=535, Percent_Identity=27.2897196261682, Blast_Score=154, Evalue=1e-38, Organism=Caenorhabditis elegans, GI72000294, Length=478, Percent_Identity=25.1046025104602, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI212646519, Length=478, Percent_Identity=25.1046025104602, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17542894, Length=465, Percent_Identity=23.4408602150538, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI161077878, Length=473, Percent_Identity=25.369978858351, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI45551474, Length=473, Percent_Identity=25.369978858351, Blast_Score=94, Evalue=3e-19, Organism=Drosophila melanogaster, GI161077880, Length=473, Percent_Identity=25.369978858351, Blast_Score=94, Evalue=3e-19, Organism=Drosophila melanogaster, GI24642670, Length=473, Percent_Identity=25.369978858351, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI24642666, Length=473, Percent_Identity=25.369978858351, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI18859893, Length=461, Percent_Identity=24.9457700650759, Blast_Score=86, Evalue=8e-17, Organism=Drosophila melanogaster, GI18859741, Length=509, Percent_Identity=24.5579567779961, Blast_Score=85, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 56656; Mature: 56656
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYQSAFSASHYQATQTGQAILDAGGTASEAMVAAAAMITVQYPHMNSIGGDSFWLICHP CCCCHHCCCCCCCHHHCCHHHHCCCCCHHHHHHHHHHEEEEECCCCCCCCCCEEEEEECC GKAPIAIDACGAASHSIDVNAYRAKGGELPESGGESAITMAGTISGWQKALQINGGQHSL CCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHEECCCHHHH SELLKPAIEAAEQGIEVTQSFVDASEKTFDRLHALDDFANLFLNQSKTLKVGDNLVNPEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH AATLTRLGEVGLDDFYRGEIAEKAALDLSKAGSPITLDDFHIHRVKVMEPLTVEISKGQL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCEEEEEECCEE YNFGAPTQGLASLLIIAIYDQLVSTTGNEFEHMHLLVEATKQAFIIRDRLITDEACLSQP EECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LQDLLSEKMIRECADRISLEKAQPWPHQAKVGDTVWMGATDKYGTMVSFIQSIYWEFGSG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCC VVLPSTGILWNIRGKSFSLDADHHNVLAPGKKPFHTLNPAYAELHDGRRMVYGTMGGEGQ EEECCCCEEEEECCCEEEECCCCCCEECCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCC PQTQACLFSRYIYQGLNLQDAIAKPRWLLGRTWGDTTNNLRLEYSLYKAHAAQLSKLGHD CHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCC VTYVTDNNELMGHAGAIVIDSQGLACASSDPRSDGSSLLGDVL EEEEECCCCEECCCCEEEECCCCCEECCCCCCCCCHHHHHHCC >Mature Secondary Structure MNYQSAFSASHYQATQTGQAILDAGGTASEAMVAAAAMITVQYPHMNSIGGDSFWLICHP CCCCHHCCCCCCCHHHCCHHHHCCCCCHHHHHHHHHHEEEEECCCCCCCCCCEEEEEECC GKAPIAIDACGAASHSIDVNAYRAKGGELPESGGESAITMAGTISGWQKALQINGGQHSL CCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHEECCCHHHH SELLKPAIEAAEQGIEVTQSFVDASEKTFDRLHALDDFANLFLNQSKTLKVGDNLVNPEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH AATLTRLGEVGLDDFYRGEIAEKAALDLSKAGSPITLDDFHIHRVKVMEPLTVEISKGQL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCEEEEEECCEE YNFGAPTQGLASLLIIAIYDQLVSTTGNEFEHMHLLVEATKQAFIIRDRLITDEACLSQP EECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LQDLLSEKMIRECADRISLEKAQPWPHQAKVGDTVWMGATDKYGTMVSFIQSIYWEFGSG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCC VVLPSTGILWNIRGKSFSLDADHHNVLAPGKKPFHTLNPAYAELHDGRRMVYGTMGGEGQ EEECCCCEEEEECCCEEEECCCCCCEECCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCC PQTQACLFSRYIYQGLNLQDAIAKPRWLLGRTWGDTTNNLRLEYSLYKAHAAQLSKLGHD CHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCC VTYVTDNNELMGHAGAIVIDSQGLACASSDPRSDGSSLLGDVL EEEEECCCCEECCCCEEEECCCCCEECCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]