| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is maeA
Identifier: 119944310
GI number: 119944310
Start: 686245
End: 687927
Strand: Reverse
Name: maeA
Synonym: Ping_0537
Alternate gene names: 119944310
Gene position: 687927-686245 (Counterclockwise)
Preceding gene: 119944311
Following gene: 119944308
Centisome position: 15.09
GC content: 43.85
Gene sequence:
>1683_bases ATGACATTTCAACGACCTTTATATATCCCCTTTGCCGGTCCGGCATTATTAGAAAGCCCTTTACTTAATAAAGGCAGCGC TTTTTCCCAGGAAGAAAGGAACAACTTCAACTTAACCGGCCTGCTGCCACATAATATCGAAACCATTGAATCGCAATCGA CGAGAGCCTATCAACAGCTTAGTTCATTTAAATCTGATTTAGATAAACATATCTACCTGCGAAATATCCAGGATACTAAT GAGACCTTATTTCATCATCTGATAGAAAATCATCTCGAAGAAGTTATGCCGCTTATTTATACACCAACGGTCGGGCTTGC TTGTGAGCAATTTTCTAAAATATACCGGCGTAAAAGAGGATTGTTTGTTTCCTACCCTGAGCGTCATAAAATTGATGATA TGTTACAAAATGCCACCAAACAAAACGTAAAAGTCATTGTAGTGACCGATGGTGAGCGCATATTGGGGTTAGGCGATCAG GGCATAGGCGGCATGGGCATTCCAATAGGTAAACTCGCTTTATATACTGCCTGCGGAGGTATCAGTCCCGCTTATTGTTT GCCAATCGTACTGGATGTTGGTACAAATAACAGTCAGTTACTGGCAGATCCTATGTATATGGGCTGGCGTAATCCCCGTA TTACGGGCGAAGAATATAATGAATTTGTAGATCTCTTTATTCAGGCGGTCAAACGCCGCTGGCCTGAGGTACTACTGCAG TTTGAAGATTTTGCACAGACTAATGCAACTCCTCTATTAAATAAATACCGCGATCAGATATGCTGCTTTAATGACGATAT TCAAGGTACTGCAGCCGTTTCCGTCGGTACACTTATTGCGGCTTGCCAGAATAAAGGTGAAAAACTCAGTGATCAGCGTA TTGCTTTCCTGGGGTCGGGATCTGCGGGTTGCGGTATTGCCCAGCACATCGTAAGACAAATGCAGCGTGAAGGTTTGACC CAAGAGCAGGCACGCCAGCGAGTATTCATGGTTGACCGTTATGGCCTGTTAACTGATCAAATGACCAACCTGCAGGCGTT TCAACAGCCTCTGATACAATATACAAAGGATCTTAGTCACTGGGATATAAGCTCCCATATTGGACTAGAGCAGGTCATCA AACAGGGCAATATCAGCGTATTATTTGGTGTAAGTGGTCAACCTGGCCTATTTACTCAAGAGGTTGTTGAAAGTTTGTGT GCTAACGTTGATCATCCGATTGTATTGCCTTTATCAAATCCCACCTCAAGGGTTGAAGCCACTCCAAAGGATATAACCAC CTGGAGTCATGGTCAGGCGATTGTTGCAACCGGCAGTCCATTTCCGCCCACTTTATATGAAAATGAGTATATTGAAGTAT CCCAGTGTAACAATAGTTACATATTCCCAGGGATCGGGCTGGGGGTCTTAGCGGCGCGGGCGACGGCAATTAGCGATAAT ATGTTAATGGCCGCCAGTCAGGCATTAGCAGATGCATCTATGCAGTATGAAAAAGTAAAAGGCGCACTATTACCGCCATT GGGTGAAATAAGACCAATAAGTAAATCAATCGCTTATGCAGTTGCCAAACAAGCAATTGCCGATGGGTTGGCTTTGCCTG TGTCTGAAGAAACCATGCAGCGCCGATTAGTTGATAATTTCTGGGCACCTAAATACAGAACCTATAGACGCACCTCTTTT TAG
Upstream 100 bases:
>100_bases TTAAATATGTGGTCATGCATTGGACACGAAAAATTAATCTGCAATGCTGATCACATCATTAATTTTTTGGTATAACTTCA AGACGTAAAAACGAGAAACT
Downstream 100 bases:
>100_bases ATACTCACCCTTGATATGAGATTACTGTCTGTTTAAAACAGGCAGTAATGTATTACAAACCCATTGCATATTTCATGACT TTATTCTTAAGCGGCCCGCC
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME
Number of amino acids: Translated: 560; Mature: 559
Protein sequence:
>560_residues MTFQRPLYIPFAGPALLESPLLNKGSAFSQEERNNFNLTGLLPHNIETIESQSTRAYQQLSSFKSDLDKHIYLRNIQDTN ETLFHHLIENHLEEVMPLIYTPTVGLACEQFSKIYRRKRGLFVSYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQ GIGGMGIPIGKLALYTACGGISPAYCLPIVLDVGTNNSQLLADPMYMGWRNPRITGEEYNEFVDLFIQAVKRRWPEVLLQ FEDFAQTNATPLLNKYRDQICCFNDDIQGTAAVSVGTLIAACQNKGEKLSDQRIAFLGSGSAGCGIAQHIVRQMQREGLT QEQARQRVFMVDRYGLLTDQMTNLQAFQQPLIQYTKDLSHWDISSHIGLEQVIKQGNISVLFGVSGQPGLFTQEVVESLC ANVDHPIVLPLSNPTSRVEATPKDITTWSHGQAIVATGSPFPPTLYENEYIEVSQCNNSYIFPGIGLGVLAARATAISDN MLMAASQALADASMQYEKVKGALLPPLGEIRPISKSIAYAVAKQAIADGLALPVSEETMQRRLVDNFWAPKYRTYRRTSF
Sequences:
>Translated_560_residues MTFQRPLYIPFAGPALLESPLLNKGSAFSQEERNNFNLTGLLPHNIETIESQSTRAYQQLSSFKSDLDKHIYLRNIQDTN ETLFHHLIENHLEEVMPLIYTPTVGLACEQFSKIYRRKRGLFVSYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQ GIGGMGIPIGKLALYTACGGISPAYCLPIVLDVGTNNSQLLADPMYMGWRNPRITGEEYNEFVDLFIQAVKRRWPEVLLQ FEDFAQTNATPLLNKYRDQICCFNDDIQGTAAVSVGTLIAACQNKGEKLSDQRIAFLGSGSAGCGIAQHIVRQMQREGLT QEQARQRVFMVDRYGLLTDQMTNLQAFQQPLIQYTKDLSHWDISSHIGLEQVIKQGNISVLFGVSGQPGLFTQEVVESLC ANVDHPIVLPLSNPTSRVEATPKDITTWSHGQAIVATGSPFPPTLYENEYIEVSQCNNSYIFPGIGLGVLAARATAISDN MLMAASQALADASMQYEKVKGALLPPLGEIRPISKSIAYAVAKQAIADGLALPVSEETMQRRLVDNFWAPKYRTYRRTSF >Mature_559_residues TFQRPLYIPFAGPALLESPLLNKGSAFSQEERNNFNLTGLLPHNIETIESQSTRAYQQLSSFKSDLDKHIYLRNIQDTNE TLFHHLIENHLEEVMPLIYTPTVGLACEQFSKIYRRKRGLFVSYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQG IGGMGIPIGKLALYTACGGISPAYCLPIVLDVGTNNSQLLADPMYMGWRNPRITGEEYNEFVDLFIQAVKRRWPEVLLQF EDFAQTNATPLLNKYRDQICCFNDDIQGTAAVSVGTLIAACQNKGEKLSDQRIAFLGSGSAGCGIAQHIVRQMQREGLTQ EQARQRVFMVDRYGLLTDQMTNLQAFQQPLIQYTKDLSHWDISSHIGLEQVIKQGNISVLFGVSGQPGLFTQEVVESLCA NVDHPIVLPLSNPTSRVEATPKDITTWSHGQAIVATGSPFPPTLYENEYIEVSQCNNSYIFPGIGLGVLAARATAISDNM LMAASQALADASMQYEKVKGALLPPLGEIRPISKSIAYAVAKQAIADGLALPVSEETMQRRLVDNFWAPKYRTYRRTSF
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family
Homologues:
Organism=Homo sapiens, GI4505143, Length=521, Percent_Identity=42.6103646833013, Blast_Score=440, Evalue=1e-123, Organism=Homo sapiens, GI62420882, Length=562, Percent_Identity=39.6797153024911, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI62420880, Length=562, Percent_Identity=39.6797153024911, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI239049447, Length=562, Percent_Identity=39.6797153024911, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI4505145, Length=552, Percent_Identity=40.036231884058, Blast_Score=414, Evalue=1e-115, Organism=Homo sapiens, GI270265879, Length=463, Percent_Identity=42.3326133909287, Blast_Score=376, Evalue=1e-104, Organism=Escherichia coli, GI87081919, Length=558, Percent_Identity=64.336917562724, Blast_Score=740, Evalue=0.0, Organism=Caenorhabditis elegans, GI17537199, Length=545, Percent_Identity=40.7339449541284, Blast_Score=390, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6322823, Length=534, Percent_Identity=43.2584269662921, Blast_Score=427, Evalue=1e-120, Organism=Drosophila melanogaster, GI281362674, Length=533, Percent_Identity=43.7148217636023, Blast_Score=443, Evalue=1e-124, Organism=Drosophila melanogaster, GI21356279, Length=533, Percent_Identity=43.7148217636023, Blast_Score=443, Evalue=1e-124, Organism=Drosophila melanogaster, GI281362672, Length=533, Percent_Identity=43.7148217636023, Blast_Score=443, Evalue=1e-124, Organism=Drosophila melanogaster, GI24646388, Length=510, Percent_Identity=42.9411764705882, Blast_Score=429, Evalue=1e-120, Organism=Drosophila melanogaster, GI24646386, Length=510, Percent_Identity=42.9411764705882, Blast_Score=429, Evalue=1e-120, Organism=Drosophila melanogaster, GI78707242, Length=511, Percent_Identity=36.5949119373777, Blast_Score=352, Evalue=5e-97, Organism=Drosophila melanogaster, GI78707238, Length=511, Percent_Identity=36.5949119373777, Blast_Score=352, Evalue=5e-97, Organism=Drosophila melanogaster, GI78707240, Length=512, Percent_Identity=36.5234375, Blast_Score=352, Evalue=5e-97, Organism=Drosophila melanogaster, GI78707232, Length=508, Percent_Identity=34.8425196850394, Blast_Score=347, Evalue=9e-96, Organism=Drosophila melanogaster, GI281363505, Length=510, Percent_Identity=34.7058823529412, Blast_Score=346, Evalue=3e-95, Organism=Drosophila melanogaster, GI78707236, Length=510, Percent_Identity=34.7058823529412, Blast_Score=346, Evalue=3e-95, Organism=Drosophila melanogaster, GI281363503, Length=508, Percent_Identity=34.4488188976378, Blast_Score=342, Evalue=6e-94, Organism=Drosophila melanogaster, GI19922384, Length=544, Percent_Identity=28.8602941176471, Blast_Score=251, Evalue=9e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MAO1_PSYIN (A1SSC6)
Other databases:
- EMBL: CP000510 - RefSeq: YP_941990.1 - ProteinModelPortal: A1SSC6 - SMR: A1SSC6 - STRING: A1SSC6 - GeneID: 4623724 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0537 - eggNOG: COG0281 - HOGENOM: HBG289821 - OMA: IQDNNET - PhylomeDB: A1SSC6 - ProtClustDB: PRK13529 - BioCyc: PING357804:PING_0537-MONOMER - HAMAP: MF_01619 - InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 - Gene3D: G3DSA:3.40.50.720 - PIRSF: PIRSF000106 - PRINTS: PR00072 - SMART: SM00919
Pfam domain/function: PF00390 malic; PF03949 Malic_M
EC number: =1.1.1.38
Molecular weight: Translated: 62300; Mature: 62169
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: ACT_SITE 100-100 ACT_SITE 171-171 BINDING 153-153 BINDING 266-266 BINDING 413-413
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFQRPLYIPFAGPALLESPLLNKGSAFSQEERNNFNLTGLLPHNIETIESQSTRAYQQL CCCCCCEEECCCCHHHHHCCCCCCCCCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHHHH SSFKSDLDKHIYLRNIQDTNETLFHHLIENHLEEVMPLIYTPTVGLACEQFSKIYRRKRG HHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC LFVSYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGG CEEECCCCCCHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHCC ISPAYCLPIVLDVGTNNSQLLADPMYMGWRNPRITGEEYNEFVDLFIQAVKRRWPEVLLQ CCHHEEEEEEEECCCCCCCEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FEDFAQTNATPLLNKYRDQICCFNDDIQGTAAVSVGTLIAACQNKGEKLSDQRIAFLGSG HHHHHCCCCCHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECC SAGCGIAQHIVRQMQREGLTQEQARQRVFMVDRYGLLTDQMTNLQAFQQPLIQYTKDLSH CCCCHHHHHHHHHHHHCCCCHHHHHHHEEEEHHCCHHHHHHHHHHHHHHHHHHHHHCCCC WDISSHIGLEQVIKQGNISVLFGVSGQPGLFTQEVVESLCANVDHPIVLPLSNPTSRVEA CCCHHCCCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHCCC TPKDITTWSHGQAIVATGSPFPPTLYENEYIEVSQCNNSYIFPGIGLGVLAARATAISDN CCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCEECCCCHHHHHHHHHHHHCCC MLMAASQALADASMQYEKVKGALLPPLGEIRPISKSIAYAVAKQAIADGLALPVSEETMQ HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RRLVDNFWAPKYRTYRRTSF HHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TFQRPLYIPFAGPALLESPLLNKGSAFSQEERNNFNLTGLLPHNIETIESQSTRAYQQL CCCCCEEECCCCHHHHHCCCCCCCCCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHHHH SSFKSDLDKHIYLRNIQDTNETLFHHLIENHLEEVMPLIYTPTVGLACEQFSKIYRRKRG HHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC LFVSYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGG CEEECCCCCCHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHCC ISPAYCLPIVLDVGTNNSQLLADPMYMGWRNPRITGEEYNEFVDLFIQAVKRRWPEVLLQ CCHHEEEEEEEECCCCCCCEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FEDFAQTNATPLLNKYRDQICCFNDDIQGTAAVSVGTLIAACQNKGEKLSDQRIAFLGSG HHHHHCCCCCHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECC SAGCGIAQHIVRQMQREGLTQEQARQRVFMVDRYGLLTDQMTNLQAFQQPLIQYTKDLSH CCCCHHHHHHHHHHHHCCCCHHHHHHHEEEEHHCCHHHHHHHHHHHHHHHHHHHHHCCCC WDISSHIGLEQVIKQGNISVLFGVSGQPGLFTQEVVESLCANVDHPIVLPLSNPTSRVEA CCCHHCCCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHCCC TPKDITTWSHGQAIVATGSPFPPTLYENEYIEVSQCNNSYIFPGIGLGVLAARATAISDN CCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCEECCCCHHHHHHHHHHHHCCC MLMAASQALADASMQYEKVKGALLPPLGEIRPISKSIAYAVAKQAIADGLALPVSEETMQ HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RRLVDNFWAPKYRTYRRTSF HHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA