| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is gor [H]
Identifier: 119944281
GI number: 119944281
Start: 643291
End: 644649
Strand: Reverse
Name: gor [H]
Synonym: Ping_0507
Alternate gene names: 119944281
Gene position: 644649-643291 (Counterclockwise)
Preceding gene: 119944282
Following gene: 119944278
Centisome position: 14.14
GC content: 43.19
Gene sequence:
>1359_bases ATGAATAATAATAAATTCGATTTTGACTATATCTGTATTGGCGGCGGCAGTGGCGGCATTGCCTCGGCTAATCGGGCATC GAAGTATGGACAAAAGGTAGCAATCATTGAAGCAAAAGCATTGGGCGGCACTTGTGTCAATGTTGGCTGCGTGCCTAAAA AAGCGATGTGGTATGCCGGACAAATTGCAGATGCGCTACGCTATGCGCCTGATTATGGTTTTGATGCACCGCTTAAAAAT TTCAGCTGGGCAAAATTAATTGAAAGCCGCGAAGCTTATATTGCGCGTATTCATCAATCATATGAACGGGTTTTGGGTAA CAATAATATTACTGTGATTGACGGTTTTGCTAAGTTTATTGATAATCATACGGTTGAAGTCAATGGAAAAACCTATACAG CACCTCATATTACGGTTGCAACGGGCGGTGCTCCAACTGTTCCAGCAATTGAGGGAGCAGAACACGGTATTACATCCGAT GGTTTTTTTGCCCTTAATGAGCAACCCAAACGAGTCGCCGTTGTTGGTGCAGGTTATATCGCGGTGGAAATAGCCGGTGT CTTTAATGCCTTGGGCAGTGAAACCCATTTACTTTGCCGTCGCCATACTTTTTTGCGTGACTTCGATCATATGCTTTCCT CCACATTGGTTGAAGTGATGCAGGAAGAAGGCCCGACACTGCATACTCACTCGACCCCTAAATCAGTACATAAAAATGAG GATGGCAGCCTTACCTTACATTTAGAAAATGAAAAATCGCTGACTGTTGACTGTTTGGTTTGGGCTATTGGTCGTAACCC GGCCAATACTGATATCGGTCTGGAAAATACCGATATTGAACTTAATAAACATAAATTTATCAATGTTGATAAATACCAAA ATACAACAGCTCAAGGTATTTATGCCGTAGGCGATAATACTGGTGAGATCCAATTAACCCCGGTTGCGATCAAGGCCGGT AGATTTTTGTCAGAGCGTTTATTTAACGGACAACTGGATGCGCATTTAGATGCTAAATTAGTGCCGACAGTGGTCTTTAG CCACCCGCCGATAGGAACAATAGGCTTGACTGAGCTTGAGGCGGAAGAAAAATACGGTAAAAGCAAGCTGAAGGTTTATA CCTCACAATTTACCAGTATGTATACCGCCATGACGACCATGCGCCAACCAACACGAATGAAATTAGTTTGTGCCGGGGAA AACCAAAAAGTGGTTGGTTTACATTGTATTGGTTTAGCATCTGATGAGATTTTGCAGGGTTTTGCGGTGGCCATGAAAAT GGGTGCAACCAAAGCAGATTTTGATAGCTGTGTCGCGATTCACCCAACCAGTGCAGAAGAATTTGTAACGATGACTTAA
Upstream 100 bases:
>100_bases GCACAGTAGAAAAACACGATTTACAAGCTTTATTGCCTTGGCTAACTTGGGCTTACCAAGAAGTCACCGTATAACAGCAC AACAAAATTTAAGGGTACTC
Downstream 100 bases:
>100_bases GTAATAAAGAAGCAACAAAAAGCCCCGCTTAATGTCTTGTATTAAGCGGGGCTTTTCTATTAATACGCTTTAAAAATTAA ACAGAAAAAGGATATTTAAT
Product: glutathione-disulfide reductase
Products: NA
Alternate protein names: GR; GRase [H]
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MNNNKFDFDYICIGGGSGGIASANRASKYGQKVAIIEAKALGGTCVNVGCVPKKAMWYAGQIADALRYAPDYGFDAPLKN FSWAKLIESREAYIARIHQSYERVLGNNNITVIDGFAKFIDNHTVEVNGKTYTAPHITVATGGAPTVPAIEGAEHGITSD GFFALNEQPKRVAVVGAGYIAVEIAGVFNALGSETHLLCRRHTFLRDFDHMLSSTLVEVMQEEGPTLHTHSTPKSVHKNE DGSLTLHLENEKSLTVDCLVWAIGRNPANTDIGLENTDIELNKHKFINVDKYQNTTAQGIYAVGDNTGEIQLTPVAIKAG RFLSERLFNGQLDAHLDAKLVPTVVFSHPPIGTIGLTELEAEEKYGKSKLKVYTSQFTSMYTAMTTMRQPTRMKLVCAGE NQKVVGLHCIGLASDEILQGFAVAMKMGATKADFDSCVAIHPTSAEEFVTMT
Sequences:
>Translated_452_residues MNNNKFDFDYICIGGGSGGIASANRASKYGQKVAIIEAKALGGTCVNVGCVPKKAMWYAGQIADALRYAPDYGFDAPLKN FSWAKLIESREAYIARIHQSYERVLGNNNITVIDGFAKFIDNHTVEVNGKTYTAPHITVATGGAPTVPAIEGAEHGITSD GFFALNEQPKRVAVVGAGYIAVEIAGVFNALGSETHLLCRRHTFLRDFDHMLSSTLVEVMQEEGPTLHTHSTPKSVHKNE DGSLTLHLENEKSLTVDCLVWAIGRNPANTDIGLENTDIELNKHKFINVDKYQNTTAQGIYAVGDNTGEIQLTPVAIKAG RFLSERLFNGQLDAHLDAKLVPTVVFSHPPIGTIGLTELEAEEKYGKSKLKVYTSQFTSMYTAMTTMRQPTRMKLVCAGE NQKVVGLHCIGLASDEILQGFAVAMKMGATKADFDSCVAIHPTSAEEFVTMT >Mature_452_residues MNNNKFDFDYICIGGGSGGIASANRASKYGQKVAIIEAKALGGTCVNVGCVPKKAMWYAGQIADALRYAPDYGFDAPLKN FSWAKLIESREAYIARIHQSYERVLGNNNITVIDGFAKFIDNHTVEVNGKTYTAPHITVATGGAPTVPAIEGAEHGITSD GFFALNEQPKRVAVVGAGYIAVEIAGVFNALGSETHLLCRRHTFLRDFDHMLSSTLVEVMQEEGPTLHTHSTPKSVHKNE DGSLTLHLENEKSLTVDCLVWAIGRNPANTDIGLENTDIELNKHKFINVDKYQNTTAQGIYAVGDNTGEIQLTPVAIKAG RFLSERLFNGQLDAHLDAKLVPTVVFSHPPIGTIGLTELEAEEKYGKSKLKVYTSQFTSMYTAMTTMRQPTRMKLVCAGE NQKVVGLHCIGLASDEILQGFAVAMKMGATKADFDSCVAIHPTSAEEFVTMT
Specific function: Maintains high levels of reduced glutathione in the cytosol [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI50301238, Length=457, Percent_Identity=50.109409190372, Blast_Score=425, Evalue=1e-119, Organism=Homo sapiens, GI22035672, Length=472, Percent_Identity=37.0762711864407, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI148277065, Length=475, Percent_Identity=34.3157894736842, Blast_Score=231, Evalue=8e-61, Organism=Homo sapiens, GI33519430, Length=475, Percent_Identity=34.3157894736842, Blast_Score=231, Evalue=8e-61, Organism=Homo sapiens, GI33519428, Length=475, Percent_Identity=34.3157894736842, Blast_Score=231, Evalue=8e-61, Organism=Homo sapiens, GI33519426, Length=475, Percent_Identity=34.3157894736842, Blast_Score=231, Evalue=8e-61, Organism=Homo sapiens, GI148277071, Length=475, Percent_Identity=34.3157894736842, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI291045266, Length=474, Percent_Identity=32.7004219409283, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI291045268, Length=474, Percent_Identity=29.746835443038, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI91199540, Length=465, Percent_Identity=27.3118279569892, Blast_Score=158, Evalue=1e-38, Organism=Escherichia coli, GI1789915, Length=445, Percent_Identity=66.7415730337079, Blast_Score=594, Evalue=1e-171, Organism=Escherichia coli, GI87082354, Length=460, Percent_Identity=27.8260869565217, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI87081717, Length=453, Percent_Identity=27.5938189845475, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1786307, Length=449, Percent_Identity=26.2806236080178, Blast_Score=142, Evalue=5e-35, Organism=Caenorhabditis elegans, GI71983429, Length=447, Percent_Identity=53.6912751677852, Blast_Score=427, Evalue=1e-120, Organism=Caenorhabditis elegans, GI71983419, Length=447, Percent_Identity=53.6912751677852, Blast_Score=427, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17557007, Length=476, Percent_Identity=33.1932773109244, Blast_Score=244, Evalue=6e-65, Organism=Caenorhabditis elegans, GI71982272, Length=480, Percent_Identity=33.9583333333333, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI32565766, Length=466, Percent_Identity=27.6824034334764, Blast_Score=160, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6325166, Length=467, Percent_Identity=52.03426124197, Blast_Score=447, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6321091, Length=467, Percent_Identity=26.1241970021413, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6325240, Length=469, Percent_Identity=27.7185501066098, Blast_Score=127, Evalue=5e-30, Organism=Drosophila melanogaster, GI24640553, Length=473, Percent_Identity=35.9408033826639, Blast_Score=274, Evalue=9e-74, Organism=Drosophila melanogaster, GI24640549, Length=470, Percent_Identity=35.9574468085106, Blast_Score=271, Evalue=5e-73, Organism=Drosophila melanogaster, GI24640551, Length=470, Percent_Identity=35.9574468085106, Blast_Score=271, Evalue=8e-73, Organism=Drosophila melanogaster, GI17737741, Length=477, Percent_Identity=33.5429769392034, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI21358499, Length=462, Percent_Identity=27.7056277056277, Blast_Score=149, Evalue=4e-36,
Paralogues:
None
Copy number: 650 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR006322 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.7 [H]
Molecular weight: Translated: 49081; Mature: 49081
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNKFDFDYICIGGGSGGIASANRASKYGQKVAIIEAKALGGTCVNVGCVPKKAMWYAG CCCCCEEEEEEEEECCCCCCCCCCHHHHCCCEEEEEEEECCCCEEEEECCCCCHHHHHHH QIADALRYAPDYGFDAPLKNFSWAKLIESREAYIARIHQSYERVLGNNNITVIDGFAKFI HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH DNHTVEVNGKTYTAPHITVATGGAPTVPAIEGAEHGITSDGFFALNEQPKRVAVVGAGYI CCCEEEECCCEEECCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCEE AVEIAGVFNALGSETHLLCRRHTFLRDFDHMLSSTLVEVMQEEGPTLHTHSTPKSVHKNE EEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCCC DGSLTLHLENEKSLTVDCLVWAIGRNPANTDIGLENTDIELNKHKFINVDKYQNTTAQGI CCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCCEE YAVGDNTGEIQLTPVAIKAGRFLSERLFNGQLDAHLDAKLVPTVVFSHPPIGTIGLTELE EEECCCCCEEEEEEEEEECCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEC AEEKYGKSKLKVYTSQFTSMYTAMTTMRQPTRMKLVCAGENQKVVGLHCIGLASDEILQG CHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEECCCHHHHHH FAVAMKMGATKADFDSCVAIHPTSAEEFVTMT HHHHHHCCCCCCCCCCEEEECCCCCCCEEEEC >Mature Secondary Structure MNNNKFDFDYICIGGGSGGIASANRASKYGQKVAIIEAKALGGTCVNVGCVPKKAMWYAG CCCCCEEEEEEEEECCCCCCCCCCHHHHCCCEEEEEEEECCCCEEEEECCCCCHHHHHHH QIADALRYAPDYGFDAPLKNFSWAKLIESREAYIARIHQSYERVLGNNNITVIDGFAKFI HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH DNHTVEVNGKTYTAPHITVATGGAPTVPAIEGAEHGITSDGFFALNEQPKRVAVVGAGYI CCCEEEECCCEEECCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCEE AVEIAGVFNALGSETHLLCRRHTFLRDFDHMLSSTLVEVMQEEGPTLHTHSTPKSVHKNE EEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCCC DGSLTLHLENEKSLTVDCLVWAIGRNPANTDIGLENTDIELNKHKFINVDKYQNTTAQGI CCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCCEE YAVGDNTGEIQLTPVAIKAGRFLSERLFNGQLDAHLDAKLVPTVVFSHPPIGTIGLTELE EEECCCCCEEEEEEEEEECCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEC AEEKYGKSKLKVYTSQFTSMYTAMTTMRQPTRMKLVCAGENQKVVGLHCIGLASDEILQG CHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEECCCHHHHHH FAVAMKMGATKADFDSCVAIHPTSAEEFVTMT HHHHHHCCCCCCCCCCEEEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3521741; 8041620; 9278503; 2006135; 8061609 [H]