Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is serC [H]

Identifier: 119944282

GI number: 119944282

Start: 644676

End: 645800

Strand: Reverse

Name: serC [H]

Synonym: Ping_0508

Alternate gene names: 119944282

Gene position: 645800-644676 (Counterclockwise)

Preceding gene: 119944283

Following gene: 119944281

Centisome position: 14.16

GC content: 41.96

Gene sequence:

>1125_bases
ATGAGTACCCCACAACCAAGCATCAAACCTGCTGTTCCTAATTTTTCATCTGGCCCATGTGCAAAACGTCCGGGTTATGA
TGTGAGTCAACTCGATCTTTGTGCATTAGGCCGTTCTCATCGATCCAGTCTTGGCAAAAAAGCATTAGAAAAAGTTATTT
CCGATACGGCTGAAATATTGCAACTGCCTAAAGGTTACCGCGTGGGTATTGTTCCAGCTTCAGATACTGGCGCGATGGAG
ATGATTTTATGGTCAATGCTCGGCCCAAGACCCGTTGATGTCTGCTACTGGGAGTCATTTGGTGAAGGCTGGTATGCTGA
TATTATCAAGCAGCTGAAATTAGACAAAGTCAATAAAATCAGCGCAGATTACGGACAGTTACCCGATTTATCAAAAGTTA
ATCCAGAAAATGATATTGTTTTCACTTGGAATGGCACAACCTCTGGTGTTAAGGTTGAGAATGGTGATTTTATTAAAGAT
GATCGCCAGGGACTAACTATTTGTGATGCAACTTCTGCTGTATTTGCGATGCCATTACCTTGGGAAAAATTAGATGTTAC
CACCTTTAGCTGGCAGAAAGTGCTTGGCGGTGAAGGGGCTCACGGAATTATTATTTTAAGTCCCCGTGCCGTTGAGCGTT
TAGAAAGCTATACACCAAGCTGGCCTTTACCTAAAATATTCCGCTTAACAGCAGGCGGAAAACTGATTGAAGGTATTTTT
AATGGTGCAACCATTAACACCCCTTCTATGCTTTGTATCGCTGATTACCAAGACGCCCTTAACTGGGTAAAAGAGATGGG
AGGTGTTCAAGCAAGCATCCAAAAATCTTTGGATAACTTAGCTGTTTTAGAGACGTTTGTGGCCAATAATAGCTGGATTA
ATTTCTTAGCTGAAAAAGCAAACACTCGCTCAAATACCAGCGTCTGTTTATCCCTTGATTTAAGTGATTCACAAATTAAA
GCATTGGTTAACTTACTGGCAGAAGAGCAAGTTGCCTATGATATTGCAGCTTATAAAGACGCGCCCAGTGGTTTACGCAT
TTGGTGTGGCAGCACAGTAGAAAAACACGATTTACAAGCTTTATTGCCTTGGCTAACTTGGGCTTACCAAGAAGTCACCG
TATAA

Upstream 100 bases:

>100_bases
AAAATTTTTTTTATGTTTAACTACTCGTAGCCAGTTGCTATTCTCTAGTGTATTTTTACGATTTAAACACAGTGATTATT
TAACGAGGATTTTGATTAAT

Downstream 100 bases:

>100_bases
CAGCACAACAAAATTTAAGGGTACTCATGAATAATAATAAATTCGATTTTGACTATATCTGTATTGGCGGCGGCAGTGGC
GGCATTGCCTCGGCTAATCG

Product: phosphoserine aminotransferase

Products: NA

Alternate protein names: Phosphohydroxythreonine aminotransferase; PSAT [H]

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MSTPQPSIKPAVPNFSSGPCAKRPGYDVSQLDLCALGRSHRSSLGKKALEKVISDTAEILQLPKGYRVGIVPASDTGAME
MILWSMLGPRPVDVCYWESFGEGWYADIIKQLKLDKVNKISADYGQLPDLSKVNPENDIVFTWNGTTSGVKVENGDFIKD
DRQGLTICDATSAVFAMPLPWEKLDVTTFSWQKVLGGEGAHGIIILSPRAVERLESYTPSWPLPKIFRLTAGGKLIEGIF
NGATINTPSMLCIADYQDALNWVKEMGGVQASIQKSLDNLAVLETFVANNSWINFLAEKANTRSNTSVCLSLDLSDSQIK
ALVNLLAEEQVAYDIAAYKDAPSGLRIWCGSTVEKHDLQALLPWLTWAYQEVTV

Sequences:

>Translated_374_residues
MSTPQPSIKPAVPNFSSGPCAKRPGYDVSQLDLCALGRSHRSSLGKKALEKVISDTAEILQLPKGYRVGIVPASDTGAME
MILWSMLGPRPVDVCYWESFGEGWYADIIKQLKLDKVNKISADYGQLPDLSKVNPENDIVFTWNGTTSGVKVENGDFIKD
DRQGLTICDATSAVFAMPLPWEKLDVTTFSWQKVLGGEGAHGIIILSPRAVERLESYTPSWPLPKIFRLTAGGKLIEGIF
NGATINTPSMLCIADYQDALNWVKEMGGVQASIQKSLDNLAVLETFVANNSWINFLAEKANTRSNTSVCLSLDLSDSQIK
ALVNLLAEEQVAYDIAAYKDAPSGLRIWCGSTVEKHDLQALLPWLTWAYQEVTV
>Mature_373_residues
STPQPSIKPAVPNFSSGPCAKRPGYDVSQLDLCALGRSHRSSLGKKALEKVISDTAEILQLPKGYRVGIVPASDTGAMEM
ILWSMLGPRPVDVCYWESFGEGWYADIIKQLKLDKVNKISADYGQLPDLSKVNPENDIVFTWNGTTSGVKVENGDFIKDD
RQGLTICDATSAVFAMPLPWEKLDVTTFSWQKVLGGEGAHGIIILSPRAVERLESYTPSWPLPKIFRLTAGGKLIEGIFN
GATINTPSMLCIADYQDALNWVKEMGGVQASIQKSLDNLAVLETFVANNSWINFLAEKANTRSNTSVCLSLDLSDSQIKA
LVNLLAEEQVAYDIAAYKDAPSGLRIWCGSTVEKHDLQALLPWLTWAYQEVTV

Specific function: Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine [H]

COG id: COG1932

COG function: function code HE; Phosphoserine aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR022278
- InterPro:   IPR006271
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: =2.6.1.52 [H]

Molecular weight: Translated: 41005; Mature: 40874

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPQPSIKPAVPNFSSGPCAKRPGYDVSQLDLCALGRSHRSSLGKKALEKVISDTAEIL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QLPKGYRVGIVPASDTGAMEMILWSMLGPRPVDVCYWESFGEGWYADIIKQLKLDKVNKI
HCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHC
SADYGQLPDLSKVNPENDIVFTWNGTTSGVKVENGDFIKDDRQGLTICDATSAVFAMPLP
CCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEECCCCCCCEEEECCCCEEECCCC
WEKLDVTTFSWQKVLGGEGAHGIIILSPRAVERLESYTPSWPLPKIFRLTAGGKLIEGIF
CCCEEEEEEHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCHHEEECCCCHHHHHHH
NGATINTPSMLCIADYQDALNWVKEMGGVQASIQKSLDNLAVLETFVANNSWINFLAEKA
CCCEECCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
NTRSNTSVCLSLDLSDSQIKALVNLLAEEQVAYDIAAYKDAPSGLRIWCGSTVEKHDLQA
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH
LLPWLTWAYQEVTV
HHHHHHHHHHHCCC
>Mature Secondary Structure 
STPQPSIKPAVPNFSSGPCAKRPGYDVSQLDLCALGRSHRSSLGKKALEKVISDTAEIL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QLPKGYRVGIVPASDTGAMEMILWSMLGPRPVDVCYWESFGEGWYADIIKQLKLDKVNKI
HCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHC
SADYGQLPDLSKVNPENDIVFTWNGTTSGVKVENGDFIKDDRQGLTICDATSAVFAMPLP
CCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEECCCCCCCEEEECCCCEEECCCC
WEKLDVTTFSWQKVLGGEGAHGIIILSPRAVERLESYTPSWPLPKIFRLTAGGKLIEGIF
CCCEEEEEEHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCHHEEECCCCHHHHHHH
NGATINTPSMLCIADYQDALNWVKEMGGVQASIQKSLDNLAVLETFVANNSWINFLAEKA
CCCEECCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
NTRSNTSVCLSLDLSDSQIKALVNLLAEEQVAYDIAAYKDAPSGLRIWCGSTVEKHDLQA
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH
LLPWLTWAYQEVTV
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]