Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is chvG [H]

Identifier: 119775141

GI number: 119775141

Start: 2436363

End: 2438522

Strand: Direct

Name: chvG [H]

Synonym: Sama_2006

Alternate gene names: 119775141

Gene position: 2436363-2438522 (Clockwise)

Preceding gene: 119775140

Following gene: 119775142

Centisome position: 56.58

GC content: 54.81

Gene sequence:

>2160_bases
ATGATCCGCCTGCCATTGGGTCTTCGCGCCAAAGTCGTTATTCTCTCACTGTTTTTGCTGTGCCTGCCCTGGCTTGGCTA
TCAATATGTGTGGGAGATGGAAAAGTACCTGCGTCACGGCCAGGAACGTACCCTTGAAGGCACCACTCAGGCGCTGGCGA
CCGCACTGCACGAGCGTCCGAGGCTGTTTGACAGTCAGGCGAGCTTTTTATCCCAGGTCGAAAAACGTAAAGATCTCTAC
GCCCACCCGCTATCGGGTCCCATTCAGCTCGACGGAAAACTGGATGATTGGGAACCCTACCGCAGCAAGGCAATGCACTA
TGGTGCAGATATGCAGTTAATGAGAGGCTCACAAAGCAGCCTCAGCTTCAATCATATGATTGGGCGATACGGTAATTACC
TGTACGCCTTTTTTGAAGTCACTGACCCGACGCCTGTGTATCGCGGCCGCAATAGCCTCAGGGTAGACAGAAATGATTAT
CTGGCCATCGCCACCCTCGATGGCAGCAATTTTTTCCACCGCTACGTGGTGGCGACACAGAAAGATGGCTGGGTGAACGC
GTTCGAGCTGCCTGCCGACCCTCAGCTCAGTTTGCCAGCGCTGCCGGAGGTGCGTATTCAGGGGCAGTGGCACACCACGG
CGCTTGGCTACAACATCGAGCTCAGGATCCCGCTGGAGATGCTGGGCGGCAAAATCAGTTTCGCCCTTCACGATGTCAAC
AACCCCAAAAACCGTGAACTGGTGGGGATAACGGGCACCTCCCGCACCGACAGCCCCGATAATCTGGGGACTGTACTTGT
ACCTTCTCCGGAAATCGAAGCCATCATCAAAGGCATGGGGCACAACAGCGCCCGCATCTGGGTAGTAGACAGACATGGTC
GGGTGCTGGCGCGCTCAGGGGACATTAAAAACAGCGACAGTATCTGGACCAAGGCCATCGGCAACGAACGTCCCGAAGGC
GCTTTTGAGCATTGGGTTCAGGAGTATCTTTATCCACTTTACTATCGGGTGCTCACCAAACCGCCTGAGGACTTTATCGA
TGGCCTTCAGGACTCCACTGAGCTCGAAGGCAGCCATATTCAAAGGGCACTTTCCGGCAAGCCCGGCAGCACCTGGCGCC
TGACCCCGGACAACAAGGCCGTGGTCCTTGCGGCGGCCAGCCCCATTTGGATTGATGACAAGGTTATGGGCGCCGTGGTG
GCCGAAGAAACCACCCATGGGATCCGCACCTTAAGAAACCGTGCGCTGGAAAAACTCTTCAATGTGATCCTGACCATCAT
GAGCATGGGTACGCTGGCACTGTTTTTCTTTGCCTCCAATATCTCCAGCCGTATCCGTAATCTCAGGGATCAGGCCGAGA
GCGCCATTGATGCACAGGGTCGGGTGAAGGCCAGCATCAGTCCGTCACAGTCGCTGGATGAAATTGGCGACTTGTCGCGT
TCACTGGCAGGCATGGTGCAACGTCTGTCCCAGTACACCCATTATCTGGAAAATATGTCGTCCCGATTGGGCCACGAACT
GAGAACCCCGGTGGCCGTGGTGCGCTCAAGCCTGGAGCATCTTTCAATGCTGAGTCTTGGGGATGACAGACAAAAGTACG
TCGACCGCGCCCAGGAAGGCGTGAGTCGCCTGAGTCTCATTCTCGCCAACATGAGCGAAGCCACCCGTTTGGAAGAGTCG
CTGTCTCAATCCGACAAGGTACGTTTTGATGCCAAGGCGGTGATAAAGGGCTGTGTTCAGGGTTACCAAATTACCTACCC
AGGCGTTGCGTTAGCGCTGACAGTGGATGAGGGAGACTACCCGCTGCGAGGTGTGCCCGAGTACCTGGCGCAGCTTATGG
ATAAGCTGATAAGCAATGCACTGGAATTTATGACACCGGGTACACCCATCAATATCAGTCTCAGTCACAGTCATAAAAAG
CTGAAACTTTGCGTCACTAATCAGGGGCCATTGTTGCCTGAGGACATGGCAGAGCGCATCTTCGACTCCATGGTCACTGT
GAGGCCTCCGGGGCAGGATAATAAACCGCACCTTGGATTGGGTTTGTATATTGCAAGACTGATTGCCGGATTTCACGGCG
GCGATATCAAAGCGGAAAATCTCGCCGGTAACGACGGTGTCCGTATATCCGTCTCAATGCCGCTCGAGTCTGCACTTTGA

Upstream 100 bases:

>100_bases
ATGTAAAGCGCATTCGCAAAAAATTCATCGCGGCCGACACCGAGTTTGATTGCATCGACACCGTCTATGGCATGGGCTAT
CGATGGGACAGCCAGAGTTC

Downstream 100 bases:

>100_bases
CTGAAACCAGACAGGCTCAATTGACGAAATAACTGAGCGGCGCTGTGGGCAAGCAGATTAAACCTTGCCCTGTTCACACC
ACTCTTGTAGCGTCGGCATC

Product: sensor histidine kinase

Products: NA

Alternate protein names: Histidine kinase sensory protein ExoS [H]

Number of amino acids: Translated: 719; Mature: 719

Protein sequence:

>719_residues
MIRLPLGLRAKVVILSLFLLCLPWLGYQYVWEMEKYLRHGQERTLEGTTQALATALHERPRLFDSQASFLSQVEKRKDLY
AHPLSGPIQLDGKLDDWEPYRSKAMHYGADMQLMRGSQSSLSFNHMIGRYGNYLYAFFEVTDPTPVYRGRNSLRVDRNDY
LAIATLDGSNFFHRYVVATQKDGWVNAFELPADPQLSLPALPEVRIQGQWHTTALGYNIELRIPLEMLGGKISFALHDVN
NPKNRELVGITGTSRTDSPDNLGTVLVPSPEIEAIIKGMGHNSARIWVVDRHGRVLARSGDIKNSDSIWTKAIGNERPEG
AFEHWVQEYLYPLYYRVLTKPPEDFIDGLQDSTELEGSHIQRALSGKPGSTWRLTPDNKAVVLAAASPIWIDDKVMGAVV
AEETTHGIRTLRNRALEKLFNVILTIMSMGTLALFFFASNISSRIRNLRDQAESAIDAQGRVKASISPSQSLDEIGDLSR
SLAGMVQRLSQYTHYLENMSSRLGHELRTPVAVVRSSLEHLSMLSLGDDRQKYVDRAQEGVSRLSLILANMSEATRLEES
LSQSDKVRFDAKAVIKGCVQGYQITYPGVALALTVDEGDYPLRGVPEYLAQLMDKLISNALEFMTPGTPINISLSHSHKK
LKLCVTNQGPLLPEDMAERIFDSMVTVRPPGQDNKPHLGLGLYIARLIAGFHGGDIKAENLAGNDGVRISVSMPLESAL

Sequences:

>Translated_719_residues
MIRLPLGLRAKVVILSLFLLCLPWLGYQYVWEMEKYLRHGQERTLEGTTQALATALHERPRLFDSQASFLSQVEKRKDLY
AHPLSGPIQLDGKLDDWEPYRSKAMHYGADMQLMRGSQSSLSFNHMIGRYGNYLYAFFEVTDPTPVYRGRNSLRVDRNDY
LAIATLDGSNFFHRYVVATQKDGWVNAFELPADPQLSLPALPEVRIQGQWHTTALGYNIELRIPLEMLGGKISFALHDVN
NPKNRELVGITGTSRTDSPDNLGTVLVPSPEIEAIIKGMGHNSARIWVVDRHGRVLARSGDIKNSDSIWTKAIGNERPEG
AFEHWVQEYLYPLYYRVLTKPPEDFIDGLQDSTELEGSHIQRALSGKPGSTWRLTPDNKAVVLAAASPIWIDDKVMGAVV
AEETTHGIRTLRNRALEKLFNVILTIMSMGTLALFFFASNISSRIRNLRDQAESAIDAQGRVKASISPSQSLDEIGDLSR
SLAGMVQRLSQYTHYLENMSSRLGHELRTPVAVVRSSLEHLSMLSLGDDRQKYVDRAQEGVSRLSLILANMSEATRLEES
LSQSDKVRFDAKAVIKGCVQGYQITYPGVALALTVDEGDYPLRGVPEYLAQLMDKLISNALEFMTPGTPINISLSHSHKK
LKLCVTNQGPLLPEDMAERIFDSMVTVRPPGQDNKPHLGLGLYIARLIAGFHGGDIKAENLAGNDGVRISVSMPLESAL
>Mature_719_residues
MIRLPLGLRAKVVILSLFLLCLPWLGYQYVWEMEKYLRHGQERTLEGTTQALATALHERPRLFDSQASFLSQVEKRKDLY
AHPLSGPIQLDGKLDDWEPYRSKAMHYGADMQLMRGSQSSLSFNHMIGRYGNYLYAFFEVTDPTPVYRGRNSLRVDRNDY
LAIATLDGSNFFHRYVVATQKDGWVNAFELPADPQLSLPALPEVRIQGQWHTTALGYNIELRIPLEMLGGKISFALHDVN
NPKNRELVGITGTSRTDSPDNLGTVLVPSPEIEAIIKGMGHNSARIWVVDRHGRVLARSGDIKNSDSIWTKAIGNERPEG
AFEHWVQEYLYPLYYRVLTKPPEDFIDGLQDSTELEGSHIQRALSGKPGSTWRLTPDNKAVVLAAASPIWIDDKVMGAVV
AEETTHGIRTLRNRALEKLFNVILTIMSMGTLALFFFASNISSRIRNLRDQAESAIDAQGRVKASISPSQSLDEIGDLSR
SLAGMVQRLSQYTHYLENMSSRLGHELRTPVAVVRSSLEHLSMLSLGDDRQKYVDRAQEGVSRLSLILANMSEATRLEES
LSQSDKVRFDAKAVIKGCVQGYQITYPGVALALTVDEGDYPLRGVPEYLAQLMDKLISNALEFMTPGTPINISLSHSHKK
LKLCVTNQGPLLPEDMAERIFDSMVTVRPPGQDNKPHLGLGLYIARLIAGFHGGDIKAENLAGNDGVRISVSMPLESAL

Specific function: Member of a two-component regulatory system ChvG(ExoS)/ChvI involved in regulating the production of succinoglycan. Activates ChvI by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1788393, Length=269, Percent_Identity=25.2788104089219, Blast_Score=73, Evalue=7e-14,
Organism=Escherichia coli, GI145693157, Length=283, Percent_Identity=25.4416961130742, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 80178; Mature: 80178

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLPLGLRAKVVILSLFLLCLPWLGYQYVWEMEKYLRHGQERTLEGTTQALATALHERP
CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHCC
RLFDSQASFLSQVEKRKDLYAHPLSGPIQLDGKLDDWEPYRSKAMHYGADMQLMRGSQSS
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHCCCCHHHHCCCCCC
LSFNHMIGRYGNYLYAFFEVTDPTPVYRGRNSLRVDRNDYLAIATLDGSNFFHRYVVATQ
CHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEEC
KDGWVNAFELPADPQLSLPALPEVRIQGQWHTTALGYNIELRIPLEMLGGKISFALHDVN
CCCCCEEEECCCCCCCCCCCCCCEEEECCEEEEEEEEEEEEEEEHHHHCCEEEEEEEECC
NPKNRELVGITGTSRTDSPDNLGTVLVPSPEIEAIIKGMGHNSARIWVVDRHGRVLARSG
CCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCEEEEEEECCCEEEEECC
DIKNSDSIWTKAIGNERPEGAFEHWVQEYLYPLYYRVLTKPPEDFIDGLQDSTELEGSHI
CCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHH
QRALSGKPGSTWRLTPDNKAVVLAAASPIWIDDKVMGAVVAEETTHGIRTLRNRALEKLF
HHHHCCCCCCEEEECCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVILTIMSMGTLALFFFASNISSRIRNLRDQAESAIDAQGRVKASISPSQSLDEIGDLSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHH
SLAGMVQRLSQYTHYLENMSSRLGHELRTPVAVVRSSLEHLSMLSLGDDRQKYVDRAQEG
HHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VSRLSLILANMSEATRLEESLSQSDKVRFDAKAVIKGCVQGYQITYPGVALALTVDEGDY
HHHHHHHHHCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCEEECCCEEEEEEECCCCC
PLRGVPEYLAQLMDKLISNALEFMTPGTPINISLSHSHKKLKLCVTNQGPLLPEDMAERI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHH
FDSMVTVRPPGQDNKPHLGLGLYIARLIAGFHGGDIKAENLAGNDGVRISVSMPLESAL
HHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEECCHHHCC
>Mature Secondary Structure
MIRLPLGLRAKVVILSLFLLCLPWLGYQYVWEMEKYLRHGQERTLEGTTQALATALHERP
CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHCC
RLFDSQASFLSQVEKRKDLYAHPLSGPIQLDGKLDDWEPYRSKAMHYGADMQLMRGSQSS
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHCCCCHHHHCCCCCC
LSFNHMIGRYGNYLYAFFEVTDPTPVYRGRNSLRVDRNDYLAIATLDGSNFFHRYVVATQ
CHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEEC
KDGWVNAFELPADPQLSLPALPEVRIQGQWHTTALGYNIELRIPLEMLGGKISFALHDVN
CCCCCEEEECCCCCCCCCCCCCCEEEECCEEEEEEEEEEEEEEEHHHHCCEEEEEEEECC
NPKNRELVGITGTSRTDSPDNLGTVLVPSPEIEAIIKGMGHNSARIWVVDRHGRVLARSG
CCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCEEEEEEECCCEEEEECC
DIKNSDSIWTKAIGNERPEGAFEHWVQEYLYPLYYRVLTKPPEDFIDGLQDSTELEGSHI
CCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHH
QRALSGKPGSTWRLTPDNKAVVLAAASPIWIDDKVMGAVVAEETTHGIRTLRNRALEKLF
HHHHCCCCCCEEEECCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVILTIMSMGTLALFFFASNISSRIRNLRDQAESAIDAQGRVKASISPSQSLDEIGDLSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHH
SLAGMVQRLSQYTHYLENMSSRLGHELRTPVAVVRSSLEHLSMLSLGDDRQKYVDRAQEG
HHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VSRLSLILANMSEATRLEESLSQSDKVRFDAKAVIKGCVQGYQITYPGVALALTVDEGDY
HHHHHHHHHCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCEEECCCEEEEEEECCCCC
PLRGVPEYLAQLMDKLISNALEFMTPGTPINISLSHSHKKLKLCVTNQGPLLPEDMAERI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHH
FDSMVTVRPPGQDNKPHLGLGLYIARLIAGFHGGDIKAENLAGNDGVRISVSMPLESAL
HHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9422587; 11481430; 7559334 [H]