Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yfiQ [H]

Identifier: 119774895

GI number: 119774895

Start: 2153130

End: 2155865

Strand: Reverse

Name: yfiQ [H]

Synonym: Sama_1760

Alternate gene names: 119774895

Gene position: 2155865-2153130 (Counterclockwise)

Preceding gene: 119774896

Following gene: 119774889

Centisome position: 50.06

GC content: 55.04

Gene sequence:

>2736_bases
ATGAGTCAGCGCACCCTCAACACCCTGTTTAAACCTTCGTCAATTGCCATTATCGGTGCCTCCAATGGGCCAAGGCGCGC
CGGTAATGTGGTGATGAAAAATCTGCTTGCCGGCGGTTTCTCAGGTCCCATCATGCCGGTCACGCCCAAATATCAGGCGG
TGATGGGTGTTCTTGCCTACCCAAGCATAGAAGCGCTGCCCATAAAGCCCGACCTTGCCATTATCTGTACCCGCGCCAGC
CGTGTGCCGGGGATCGTTGAAACCCTCGCCCAGTTTGGCTGTAAGGTCGCCATTATTATGGCGTCAGGGATGGCAAATGA
GATGGACGGCGAAGGACAATCGCTGCTCGCCACCACCCTCGCCAACGCCAAACGCTATGGCATGCGCATTCTGGGGCCTA
ACAGTTTAGGCATGATGTTGCCTAATCTCGGACTCAATGCCAGCCTGGCCCACACTTCCGCACAGCCAGGCAAAATTGCC
TTTGTCAGTCAGTCTGCTGCCGTATGCACCACAGTACTGGACTGGGCCAATAACAAAGGCATTGGCTTTTCATCGTTTAT
TTCACTTGGCGACGCCACCGACATCGACTTTGACGAACTGCTGGACTTTCTTGGACGCGATGGCCGTACCAGCGCCATCA
TGCTCTATATGGACGCCATCAACGAAAAGCGCCACTTTCTCTCGGCGGCACGAGCTGCCGCCCGCAATAAGCCCATACTG
GTGATTAAGTCTGGTCGTAGCCAGGAAGGCGCACGGGCGGCCAAACTGCATACCGGTGGAGTCAGTGGCAGTGACGCCGT
CTATGAGGCCGCGTTCAGACGAGCAGGTATGCTGAGGGTGAATGACCTGGTTGAGATGTTCGCAGCACTGGAGAGCCTCA
ACCACGGTAACGATCTGAAAGGTGAGCGTCTGGGGATCATCAGTAATGGCGGCGGCCCAGCGGTACTGGCTGTGGATGAG
CTTATCAGCAGGGGGGGGAAGCTGGCCGAGCTGTCAGAGGATACCTGCCGAAAACTCGATACCGTGTTGCCCAAGACCTG
GTCGGCACAAAACCCTATCGACATCATCGGGGATGCAGATGCCAAGCGTTATGTGGATGCACTGAATATCCTGATGGACA
GTGACGACGCCGACGCCATTTTAGTGCTGCACTCGCCGTCGGCCCTGGGCGAAAGCGAACTGATTGCCGAGGCAGTTGCC
GATGCCATTAAAAAGCACCCCCATCGCAGTAAACTGAACATCTTAACCAACTGGAGCGGCGAAAATTCGGCCTATAAGGC
CAGAAAACGCTTCACCAAAGCGGGGGTTGCCACCTACCGGACACCTGAAGGCGCTGTGGGTGCCTTTATGCATATGGTGG
AGTACCGCCGTAACCAAAAGTTGCTCCAGGAAGTGCCGCAATCCATCACCGACAAGGTGCCCCACGATGCCGGTAAAGCC
CGCGAAGTCATGCAGGCAGCGCTGGCAAAGGGGAAAACCGTATTGGAAACCTACGATGCCAGTGCGATTTTGGGTGCTTA
TGGCCTCAACACCATAGATACCTGGTTTGCCAAAGATGCCGCCGAGGCTGCGGATATCGCAGAACAAGTGGGTTATCCGA
TAGCGCTTAAAATACAATCGCCGGATATTCTGCATAAATCCGATGTTTATGGAGTGACCTTAAACCTTACCAGCGCGGAT
GAAATCCACCATGCTGCGATGGCGATGATGCAGCGGGTTCATCAGTCAAACCCCGAGGCGAAAATTGAAGGCTTGATAGT
GCAGCGGATGGCGCTGACAGCAGGCGCGCAGGAACTTCGACTGGCCGTGATAAGCGACCCAGTATTCGGGCCTGCCATTT
GCTTGGGTGAAGGCGGCTCAGAATGGCAACCCACCCGGGATGCCGCCGTTGCCCTGCCCCCGCTTAATATGGCGTTGGCG
CGCTACATGGTGATCCAGGCATTGAAGACAGGTAAGTTGCGCGACCGCCACCTGCCTCAGGGCCTGGACATGCACGCCCT
GTGTCTGATGCTGACACAGCTCAGCCATCTGGTGATTGATTGCCCACAAATTCAGGCACTGGACCTTAATCCCGTGCTGG
CGGCCGGTGACAAGATAACCCTGCTGGACATTAATCTGAGGCTCGACCCGCAGTGCAGCGATAACACTAATCGCCTCGCC
ATCATGCCCTATCCCAAGGAGCTCGAAGAGCAGGCTGTGCTGCGTAACGGCATTCAAGTGATGTTAAGGCCCATCCTCCC
TGAAGATGAGCCCAAACACCTTGCCTTCGATAATTCGCTTACCGATGAAGACAGGTACAAGCGCTATTTTGGCGCCCGTC
AGCGCATGACCCACGAAGAAATGGCGGTGCTGACCCAAATCGATTACGCGAGGGAGATGGCCTTTATCGCCACAGCTCAG
GATGCCAACGGCGAGGATTACACCTTGGGCGCAGTGCGGGCATCGATTGACCCGGATAACACTGAAGCGGAATTTGCCAT
GGCCGTGCGAAGCGATCACCAGGGGCTGGGCCTTGGTAAGTTATTGCTGGAAAAGCTTATCCGCTACTATCAGGCCAATG
AAACTCAGGTATTGACGGGCTTTACCATGATTGAAAACCGTAACATGGCGAATCTGGCACGTACCCTCGGTTTTACGGTG
ACTTTTGATATGGAAGAGCACCTGATTAAGATGCACATGGATCTTAAGGCAATCTCACCCAAGAATGGTGTTGATAACGA
CCTGCATGCAACCTGA

Upstream 100 bases:

>100_bases
AATAATTCGTATTAACATTATAAATTCATGATATTTCTCAAGTGATGCCTGCCTGTGGTTCATGTAGACTGTTTCTCATG
CGTCAAAGGATGGAGTCTTC

Downstream 100 bases:

>100_bases
CTGCTGAAAACCGCGTTCCGAATACAGTCATCTGATCACAGGGGAACGACCAGCGACCGATAACGGTCGCTAGTCAGCGA
GGCAAACCCGGTTCCGGCCA

Product: acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 911; Mature: 910

Protein sequence:

>911_residues
MSQRTLNTLFKPSSIAIIGASNGPRRAGNVVMKNLLAGGFSGPIMPVTPKYQAVMGVLAYPSIEALPIKPDLAIICTRAS
RVPGIVETLAQFGCKVAIIMASGMANEMDGEGQSLLATTLANAKRYGMRILGPNSLGMMLPNLGLNASLAHTSAQPGKIA
FVSQSAAVCTTVLDWANNKGIGFSSFISLGDATDIDFDELLDFLGRDGRTSAIMLYMDAINEKRHFLSAARAAARNKPIL
VIKSGRSQEGARAAKLHTGGVSGSDAVYEAAFRRAGMLRVNDLVEMFAALESLNHGNDLKGERLGIISNGGGPAVLAVDE
LISRGGKLAELSEDTCRKLDTVLPKTWSAQNPIDIIGDADAKRYVDALNILMDSDDADAILVLHSPSALGESELIAEAVA
DAIKKHPHRSKLNILTNWSGENSAYKARKRFTKAGVATYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSITDKVPHDAGKA
REVMQAALAKGKTVLETYDASAILGAYGLNTIDTWFAKDAAEAADIAEQVGYPIALKIQSPDILHKSDVYGVTLNLTSAD
EIHHAAMAMMQRVHQSNPEAKIEGLIVQRMALTAGAQELRLAVISDPVFGPAICLGEGGSEWQPTRDAAVALPPLNMALA
RYMVIQALKTGKLRDRHLPQGLDMHALCLMLTQLSHLVIDCPQIQALDLNPVLAAGDKITLLDINLRLDPQCSDNTNRLA
IMPYPKELEEQAVLRNGIQVMLRPILPEDEPKHLAFDNSLTDEDRYKRYFGARQRMTHEEMAVLTQIDYAREMAFIATAQ
DANGEDYTLGAVRASIDPDNTEAEFAMAVRSDHQGLGLGKLLLEKLIRYYQANETQVLTGFTMIENRNMANLARTLGFTV
TFDMEEHLIKMHMDLKAISPKNGVDNDLHAT

Sequences:

>Translated_911_residues
MSQRTLNTLFKPSSIAIIGASNGPRRAGNVVMKNLLAGGFSGPIMPVTPKYQAVMGVLAYPSIEALPIKPDLAIICTRAS
RVPGIVETLAQFGCKVAIIMASGMANEMDGEGQSLLATTLANAKRYGMRILGPNSLGMMLPNLGLNASLAHTSAQPGKIA
FVSQSAAVCTTVLDWANNKGIGFSSFISLGDATDIDFDELLDFLGRDGRTSAIMLYMDAINEKRHFLSAARAAARNKPIL
VIKSGRSQEGARAAKLHTGGVSGSDAVYEAAFRRAGMLRVNDLVEMFAALESLNHGNDLKGERLGIISNGGGPAVLAVDE
LISRGGKLAELSEDTCRKLDTVLPKTWSAQNPIDIIGDADAKRYVDALNILMDSDDADAILVLHSPSALGESELIAEAVA
DAIKKHPHRSKLNILTNWSGENSAYKARKRFTKAGVATYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSITDKVPHDAGKA
REVMQAALAKGKTVLETYDASAILGAYGLNTIDTWFAKDAAEAADIAEQVGYPIALKIQSPDILHKSDVYGVTLNLTSAD
EIHHAAMAMMQRVHQSNPEAKIEGLIVQRMALTAGAQELRLAVISDPVFGPAICLGEGGSEWQPTRDAAVALPPLNMALA
RYMVIQALKTGKLRDRHLPQGLDMHALCLMLTQLSHLVIDCPQIQALDLNPVLAAGDKITLLDINLRLDPQCSDNTNRLA
IMPYPKELEEQAVLRNGIQVMLRPILPEDEPKHLAFDNSLTDEDRYKRYFGARQRMTHEEMAVLTQIDYAREMAFIATAQ
DANGEDYTLGAVRASIDPDNTEAEFAMAVRSDHQGLGLGKLLLEKLIRYYQANETQVLTGFTMIENRNMANLARTLGFTV
TFDMEEHLIKMHMDLKAISPKNGVDNDLHAT
>Mature_910_residues
SQRTLNTLFKPSSIAIIGASNGPRRAGNVVMKNLLAGGFSGPIMPVTPKYQAVMGVLAYPSIEALPIKPDLAIICTRASR
VPGIVETLAQFGCKVAIIMASGMANEMDGEGQSLLATTLANAKRYGMRILGPNSLGMMLPNLGLNASLAHTSAQPGKIAF
VSQSAAVCTTVLDWANNKGIGFSSFISLGDATDIDFDELLDFLGRDGRTSAIMLYMDAINEKRHFLSAARAAARNKPILV
IKSGRSQEGARAAKLHTGGVSGSDAVYEAAFRRAGMLRVNDLVEMFAALESLNHGNDLKGERLGIISNGGGPAVLAVDEL
ISRGGKLAELSEDTCRKLDTVLPKTWSAQNPIDIIGDADAKRYVDALNILMDSDDADAILVLHSPSALGESELIAEAVAD
AIKKHPHRSKLNILTNWSGENSAYKARKRFTKAGVATYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSITDKVPHDAGKAR
EVMQAALAKGKTVLETYDASAILGAYGLNTIDTWFAKDAAEAADIAEQVGYPIALKIQSPDILHKSDVYGVTLNLTSADE
IHHAAMAMMQRVHQSNPEAKIEGLIVQRMALTAGAQELRLAVISDPVFGPAICLGEGGSEWQPTRDAAVALPPLNMALAR
YMVIQALKTGKLRDRHLPQGLDMHALCLMLTQLSHLVIDCPQIQALDLNPVLAAGDKITLLDINLRLDPQCSDNTNRLAI
MPYPKELEEQAVLRNGIQVMLRPILPEDEPKHLAFDNSLTDEDRYKRYFGARQRMTHEEMAVLTQIDYAREMAFIATAQD
ANGEDYTLGAVRASIDPDNTEAEFAMAVRSDHQGLGLGKLLLEKLIRYYQANETQVLTGFTMIENRNMANLARTLGFTVT
FDMEEHLIKMHMDLKAISPKNGVDNDLHAT

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=895, Percent_Identity=51.5083798882682, Blast_Score=914, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR011761
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR016102 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 98805; Mature: 98674

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRTLNTLFKPSSIAIIGASNGPRRAGNVVMKNLLAGGFSGPIMPVTPKYQAVMGVLAY
CCCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHC
PSIEALPIKPDLAIICTRASRVPGIVETLAQFGCKVAIIMASGMANEMDGEGQSLLATTL
CCCCEEECCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHH
ANAKRYGMRILGPNSLGMMLPNLGLNASLAHTSAQPGKIAFVSQSAAVCTTVLDWANNKG
HHHHHCCEEEECCCCHHHHCCCCCCCCEECCCCCCCCEEEEEECCHHHHHHHHHHCCCCC
IGFSSFISLGDATDIDFDELLDFLGRDGRTSAIMLYMDAINEKRHFLSAARAAARNKPIL
CCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEE
VIKSGRSQEGARAAKLHTGGVSGSDAVYEAAFRRAGMLRVNDLVEMFAALESLNHGNDLK
EEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
GERLGIISNGGGPAVLAVDELISRGGKLAELSEDTCRKLDTVLPKTWSAQNPIDIIGDAD
CCEEEEEECCCCCEEEEHHHHHHCCCCEECCCHHHHHHHHHHCCCCCCCCCCCEEECCCH
AKRYVDALNILMDSDDADAILVLHSPSALGESELIAEAVADAIKKHPHRSKLNILTNWSG
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
ENSAYKARKRFTKAGVATYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSITDKVPHDAGKA
CCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
REVMQAALAKGKTVLETYDASAILGAYGLNTIDTWFAKDAAEAADIAEQVGYPIALKIQS
HHHHHHHHHCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
PDILHKSDVYGVTLNLTSADEIHHAAMAMMQRVHQSNPEAKIEGLIVQRMALTAGAQELR
CCCEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHEE
LAVISDPVFGPAICLGEGGSEWQPTRDAAVALPPLNMALARYMVIQALKTGKLRDRHLPQ
EEEECCCCCCCEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCC
GLDMHALCLMLTQLSHLVIDCPQIQALDLNPVLAAGDKITLLDINLRLDPQCSDNTNRLA
CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCEEEEEEEEEEECCCCCCCCCEEE
IMPYPKELEEQAVLRNGIQVMLRPILPEDEPKHLAFDNSLTDEDRYKRYFGARQRMTHEE
EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCHHH
MAVLTQIDYAREMAFIATAQDANGEDYTLGAVRASIDPDNTEAEFAMAVRSDHQGLGLGK
HHHHHHHHHHHHEEEEEEECCCCCCCEEEEEEEEECCCCCCCHHEEEEECCCCCCCCHHH
LLLEKLIRYYQANETQVLTGFTMIENRNMANLARTLGFTVTFDMEEHLIKMHMDLKAISP
HHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHCCEEEECHHHHHHHHHHCCEECCC
KNGVDNDLHAT
CCCCCCCCCCC
>Mature Secondary Structure 
SQRTLNTLFKPSSIAIIGASNGPRRAGNVVMKNLLAGGFSGPIMPVTPKYQAVMGVLAY
CCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHC
PSIEALPIKPDLAIICTRASRVPGIVETLAQFGCKVAIIMASGMANEMDGEGQSLLATTL
CCCCEEECCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHH
ANAKRYGMRILGPNSLGMMLPNLGLNASLAHTSAQPGKIAFVSQSAAVCTTVLDWANNKG
HHHHHCCEEEECCCCHHHHCCCCCCCCEECCCCCCCCEEEEEECCHHHHHHHHHHCCCCC
IGFSSFISLGDATDIDFDELLDFLGRDGRTSAIMLYMDAINEKRHFLSAARAAARNKPIL
CCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEE
VIKSGRSQEGARAAKLHTGGVSGSDAVYEAAFRRAGMLRVNDLVEMFAALESLNHGNDLK
EEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
GERLGIISNGGGPAVLAVDELISRGGKLAELSEDTCRKLDTVLPKTWSAQNPIDIIGDAD
CCEEEEEECCCCCEEEEHHHHHHCCCCEECCCHHHHHHHHHHCCCCCCCCCCCEEECCCH
AKRYVDALNILMDSDDADAILVLHSPSALGESELIAEAVADAIKKHPHRSKLNILTNWSG
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
ENSAYKARKRFTKAGVATYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSITDKVPHDAGKA
CCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
REVMQAALAKGKTVLETYDASAILGAYGLNTIDTWFAKDAAEAADIAEQVGYPIALKIQS
HHHHHHHHHCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
PDILHKSDVYGVTLNLTSADEIHHAAMAMMQRVHQSNPEAKIEGLIVQRMALTAGAQELR
CCCEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHEE
LAVISDPVFGPAICLGEGGSEWQPTRDAAVALPPLNMALARYMVIQALKTGKLRDRHLPQ
EEEECCCCCCCEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCC
GLDMHALCLMLTQLSHLVIDCPQIQALDLNPVLAAGDKITLLDINLRLDPQCSDNTNRLA
CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCEEEEEEEEEEECCCCCCCCCEEE
IMPYPKELEEQAVLRNGIQVMLRPILPEDEPKHLAFDNSLTDEDRYKRYFGARQRMTHEE
EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCHHH
MAVLTQIDYAREMAFIATAQDANGEDYTLGAVRASIDPDNTEAEFAMAVRSDHQGLGLGK
HHHHHHHHHHHHEEEEEEECCCCCCCEEEEEEEEECCCCCCCHHEEEEECCCCCCCCHHH
LLLEKLIRYYQANETQVLTGFTMIENRNMANLARTLGFTVTFDMEEHLIKMHMDLKAISP
HHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHCCEEEECHHHHHHHHHHCCEECCC
KNGVDNDLHAT
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]