Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is surE

Identifier: 119774178

GI number: 119774178

Start: 1259170

End: 1259916

Strand: Direct

Name: surE

Synonym: Sama_1041

Alternate gene names: 119774178

Gene position: 1259170-1259916 (Clockwise)

Preceding gene: 119774177

Following gene: 119774179

Centisome position: 29.24

GC content: 54.62

Gene sequence:

>747_bases
ATGCGCCTGCTGGTGAGTAACGATGATGGTGTGTATGCCCCGGGTATCAAGGCGCTGGCCGAGGCATTAAAGACCATTGC
TCATGTGGATGTGGTGGCACCGGACAGAAACTGCTCCGCCGCCAGTAACTCGCTGACCTTGACTAATCCATTGAGAATTA
ATAGGTTAGACAATGGTTATATTGCGGTTAACGGCACGCCATCGGACTGTGTGCATATCGCCATTCGCGAAATTTGCACC
GAAGAGCCTGAGTTGGTGGTATCGGGTATTAACGCTGGAGCGAATATGGGAGATGACACCCTGTATTCCGGCACTGTGGC
TGCGGCCATGGAGGGGCGCTTTCAGGGCCTGCCAGCTATCGCTGTGTCCCTGTCGGCCCGTACCCCTGTGCACTATGATG
CGGCTGCACAAATTGCACTGCGCATCGTTGAAGGATTGAAGGCACATCCATTGCCAGCGGACCAAATTCTTAATGTGAAC
GTGCCTGATTTGCCTCTTGAGGAAATCAAGGGCATCAAGGTGACTCGTCTTGGGGCGCGTCACAGGGCCGAAGGTGTGGT
AAGAACCACCGACCCTGCTGGTCGGGAAATTTTCTGGCTCGGTCCACCGGGTGAGGAGCTGGATGCCAGCGAAGGCACCG
ACTTTGGTGCCGTGGCTGAAGGCTATGTGTCCATCACGCCGTTAACCGTCGACCTGACCGCACACAGTCAACTTAACGCA
CTGGCAAACTGGATAGAAAAGATATGA

Upstream 100 bases:

>100_bases
TTTGCCACCAGTGTGCTCAGAGAGCTTTGCGAGTACACAGATATAAAAGAGCTGGAGTGGCGCCGGGCGGTGGCCGAGCG
TGATGCGCGGGAGGGCGACA

Downstream 100 bases:

>100_bases
ACCAGACCGGCTCGACGGTGGCAATCAACCTTGCAAAGAAGTTGTATGACGCTGGGATCCGCGACAACCTCGTTTTGCAG
GCCATCGCCAACACGCCCCG

Product: stationary phase survival protein SurE

Products: NA

Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MRLLVSNDDGVYAPGIKALAEALKTIAHVDVVAPDRNCSAASNSLTLTNPLRINRLDNGYIAVNGTPSDCVHIAIREICT
EEPELVVSGINAGANMGDDTLYSGTVAAAMEGRFQGLPAIAVSLSARTPVHYDAAAQIALRIVEGLKAHPLPADQILNVN
VPDLPLEEIKGIKVTRLGARHRAEGVVRTTDPAGREIFWLGPPGEELDASEGTDFGAVAEGYVSITPLTVDLTAHSQLNA
LANWIEKI

Sequences:

>Translated_248_residues
MRLLVSNDDGVYAPGIKALAEALKTIAHVDVVAPDRNCSAASNSLTLTNPLRINRLDNGYIAVNGTPSDCVHIAIREICT
EEPELVVSGINAGANMGDDTLYSGTVAAAMEGRFQGLPAIAVSLSARTPVHYDAAAQIALRIVEGLKAHPLPADQILNVN
VPDLPLEEIKGIKVTRLGARHRAEGVVRTTDPAGREIFWLGPPGEELDASEGTDFGAVAEGYVSITPLTVDLTAHSQLNA
LANWIEKI
>Mature_248_residues
MRLLVSNDDGVYAPGIKALAEALKTIAHVDVVAPDRNCSAASNSLTLTNPLRINRLDNGYIAVNGTPSDCVHIAIREICT
EEPELVVSGINAGANMGDDTLYSGTVAAAMEGRFQGLPAIAVSLSARTPVHYDAAAQIALRIVEGLKAHPLPADQILNVN
VPDLPLEEIKGIKVTRLGARHRAEGVVRTTDPAGREIFWLGPPGEELDASEGTDFGAVAEGYVSITPLTVDLTAHSQLNA
LANWIEKI

Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates

COG id: COG0496

COG function: function code R; Predicted acid phosphatase

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surE nucleotidase family

Homologues:

Organism=Escherichia coli, GI1789101, Length=249, Percent_Identity=57.429718875502, Blast_Score=286, Evalue=1e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SURE_SHEAM (A1S4E2)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_926918.1
- ProteinModelPortal:   A1S4E2
- SMR:   A1S4E2
- STRING:   A1S4E2
- GeneID:   4603293
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_1041
- NMPDR:   fig|326297.7.peg.981
- eggNOG:   COG0496
- HOGENOM:   HBG600532
- OMA:   NGFYYVN
- PhylomeDB:   A1S4E2
- ProtClustDB:   PRK00346
- GO:   GO:0005737
- HAMAP:   MF_00060
- InterPro:   IPR002828
- Gene3D:   G3DSA:3.40.1210.10
- TIGRFAMs:   TIGR00087

Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase

EC number: =3.1.3.5

Molecular weight: Translated: 26214; Mature: 26214

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLVSNDDGVYAPGIKALAEALKTIAHVDVVAPDRNCSAASNSLTLTNPLRINRLDNGY
CEEEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEECCEEEEEECCCE
IAVNGTPSDCVHIAIREICTEEPELVVSGINAGANMGDDTLYSGTVAAAMEGRFQGLPAI
EEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEECCCHHHHHCCCCCCCCEE
AVSLSARTPVHYDAAAQIALRIVEGLKAHPLPADQILNVNVPDLPLEEIKGIKVTRLGAR
EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCHHHHCCEEEEECCCH
HRAEGVVRTTDPAGREIFWLGPPGEELDASEGTDFGAVAEGYVSITPLTVDLTAHSQLNA
HHCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHCCCEEEEEEEEEEEECCHHHHH
LANWIEKI
HHHHHHCC
>Mature Secondary Structure
MRLLVSNDDGVYAPGIKALAEALKTIAHVDVVAPDRNCSAASNSLTLTNPLRINRLDNGY
CEEEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEECCEEEEEECCCE
IAVNGTPSDCVHIAIREICTEEPELVVSGINAGANMGDDTLYSGTVAAAMEGRFQGLPAI
EEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEECCCHHHHHCCCCCCCCEE
AVSLSARTPVHYDAAAQIALRIVEGLKAHPLPADQILNVNVPDLPLEEIKGIKVTRLGAR
EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCHHHHCCEEEEECCCH
HRAEGVVRTTDPAGREIFWLGPPGEELDASEGTDFGAVAEGYVSITPLTVDLTAHSQLNA
HHCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHCCCEEEEEEEEEEEECCHHHHH
LANWIEKI
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA