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The map label for this gene is ydfJ [H]

Identifier: 119716402

GI number: 119716402

Start: 2324513

End: 2326867

Strand: Reverse

Name: ydfJ [H]

Synonym: Noca_2172

Alternate gene names: 119716402

Gene position: 2326867-2324513 (Counterclockwise)

Preceding gene: 119716403

Following gene: 119716400

Centisome position: 46.67

GC content: 67.01

Gene sequence:

>2355_bases
ATGTCAACCTTCCTGTACCGGCTCGGAAGAACCGCGTTCGGCAAACCGTGGCTGTTCGTCGCCGGCTGGGTCGCAGTCCT
CGCGGTGGTCGTTGGTGGCATGGCAATCAACGGGGTAAGCGTCAGCTCCGAGATGAAGATCGAGGGCACCGAGGCCCAGA
CCGTGCTCGACCGCGTGGCCGATGAGCTCCCCGAGGCCTCGGGAGGCCAGGCCAGCGTGGTCTTCACCGTGCCGGACGGC
GAGCGCCTCGACACTCCGGAGCGACTCGCGGTCATCAGCGGCACCGTCAGCGACGTCTATGACCTCGAGAAGGTCGTCAA
CCCCCTCGACGCCGCGCTGGGTGCCGCCGAGCAGGGAGGACCGGGCACCCCCCAGGAGAATGCACCGGGCGATCCCCCAG
CCGGGTCGGACCAAGAACCGGCACAGGAGCAGGGGCCTCCGTACCAGCCGCTGCTGGTGGACGGGGAACCGGTGCCCGGC
GTGCTGGTGTCCTCGGACGGGCAGGTCGCGCTGTTCCAGTTTCAATTCACGGTCGCCGCAACCTCACTGACAGATGACGA
CGTCACCTCGGTGGTCGAGGTGGTGGAACGCGCCGAGCAGGGAACGGGGATGACCGTTCTACCGAGCGACTCGCTCAAGG
CCCTCGAGATCCCCATCGGCATCGGCGAGGTGATCGGTCTCGCCGTCGCCGCCCTCGTGCTGGTGCTCACCCTGGGTTCC
CTTGTCGCCGCCGGCCTGCCCCTGATCACCGCACTGGTCGGCGTCGGCATCGGCGTGGGCGGCGCATACGCGCTCTCGAA
CGTCGTCGAGATGAACTCCGCCACTCCCGTCCTCGGCCTCATGGTCGGGCTCGCCGTCGGCATCGACTACGCACTGTTCG
TCGTCAACCGGCAGCGACGACTGATCCTCGACCAGGGACTCACCGCTCAGGAGGCAGCCGGCAGAGCAGTCGGCACCGCG
GGCAGTGCCGTGTTCTTCGCCGGCCTGACCGTCCTCATCGCGCTCACCGCGCTCACCGTCATCGGCATCGCAGTGCTGTC
CACGATGGCACTGGTCGCCGCGTCCACGGTGGCCCTGGCCGTCCTCATCGCCCTGAGCCTTCTGCCGGCGCTGCTCGGTC
TGGTCGGGGAGCGGATCTGCTCCGACAAAGCCCGAGCCCGACGCCGCACCAAGGTCGAGGCCGAGTCGCACGGCGTCGCT
GACCATTGGGTCAAGGGTGTGATCAGGTTCAGGTGGCCTGTCATCGCCGGTGTGGTCGCGATCCTGGGCGTGATGGCGAT
CCCCGCAGCCAGCATGCACCTGGGGATCCCTTCCGGCGCGACCGCCAACCAGGACACAGCCGCCCGCCAGAGCTACGAGG
CAGTGTCCCAAGGCTTCGGCGAGGGATTCAACGGCCCCCTCCTGGTCACCGCCGAGCCCGTCGGCACCTCAGGCCGCGTC
ACGCCCGAGCTGACCGCGAAACTAATCGGCGAGTTCCAGGACCGAGGCGACATTGTGCTGGCCGCCCCCGTTGGCGTCAA
CGAGGCTGGCGACCTGGCTGTGTTCAGCATCATCCCCGCCTCCGGACCCGATGACGAGGCCACCAGCGACCTCGTCAAAT
CGCTACGCGAGCCCGGCAACGCCATCGCCCAGCGCAACCAGGTGCAGTTGGGCGTGACCGGGTTCACCGCCATCCGCATC
GACATGTCCGACAAGATCGCCGGCGTTCTTCCCCTCTATCTCGGCATCATCATCATCCTTTCCATCCTGATCCTGATGCT
GGTCTTCCGCTCGGTCGTGGTCCCAATCAAGGCCACAGCGGGCTTCCTGCTCAGCATCCTGGCCACCTTCGGTGCCACCA
CTGCCGTCTTCCAGTGGGGCTGGCTCAGCGGCCTCTTCGGGTTCGACACCGGCGGCCCGCTGATGAGCTTCATGCCGATC
ATCGTGACCGGCATCCTCTACGGACTCGCCATGGATTACGAGGTCTTCCTGGTCTCCTCGATGCGCGAGGCGCACATCCA
CGGCCAAGCAGCCCGCCAGAGCGTCGTCCACGGGTTCGACCAGGCCAGCCGGGTCGTGGTCGCAGCCGCCATCATCATGG
TCGCAGTGTTCTCCGGCTTCATCTTCAGCCACGACATCATGATCAAGCAGATCGGCTTCGCCCTCGCCGCCGGCATCCTC
ATCGACGCCTTCCTCGTCCGGCTGACCCTCGTCCCGGCGCTCATGGCCGCCTTCGACGAGCGAGCATGGTGGCTGCCCCG
CTGGCTCGACCACCTACTGCCGGACCTCGACATCGAGGGCGACAAGCTCTTGGCCATGCTCAACCAGCAGGCCGAACCCA
CCGACCGAGAAGACAACGACATCCGCAGCCGATGA

Upstream 100 bases:

>100_bases
CCGTGTCGATGGACTACGACTCGTTCCTCGACCTCACCTTCGACTACCTACGCCACGGCCTCTAGCCAGCGACTCCACGC
CCTCTAGGAGAACCAGACCG

Downstream 100 bases:

>100_bases
GAAGGCTGACGCACCCAGAGCCGATCGCTCCTGACACACTTTGGAGCCATCACCAGACCGACCCGGGCACGGTCAAGCGC
GGTAGACCATCAACGTCCTG

Product: MMPL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 784; Mature: 783

Protein sequence:

>784_residues
MSTFLYRLGRTAFGKPWLFVAGWVAVLAVVVGGMAINGVSVSSEMKIEGTEAQTVLDRVADELPEASGGQASVVFTVPDG
ERLDTPERLAVISGTVSDVYDLEKVVNPLDAALGAAEQGGPGTPQENAPGDPPAGSDQEPAQEQGPPYQPLLVDGEPVPG
VLVSSDGQVALFQFQFTVAATSLTDDDVTSVVEVVERAEQGTGMTVLPSDSLKALEIPIGIGEVIGLAVAALVLVLTLGS
LVAAGLPLITALVGVGIGVGGAYALSNVVEMNSATPVLGLMVGLAVGIDYALFVVNRQRRLILDQGLTAQEAAGRAVGTA
GSAVFFAGLTVLIALTALTVIGIAVLSTMALVAASTVALAVLIALSLLPALLGLVGERICSDKARARRRTKVEAESHGVA
DHWVKGVIRFRWPVIAGVVAILGVMAIPAASMHLGIPSGATANQDTAARQSYEAVSQGFGEGFNGPLLVTAEPVGTSGRV
TPELTAKLIGEFQDRGDIVLAAPVGVNEAGDLAVFSIIPASGPDDEATSDLVKSLREPGNAIAQRNQVQLGVTGFTAIRI
DMSDKIAGVLPLYLGIIIILSILILMLVFRSVVVPIKATAGFLLSILATFGATTAVFQWGWLSGLFGFDTGGPLMSFMPI
IVTGILYGLAMDYEVFLVSSMREAHIHGQAARQSVVHGFDQASRVVVAAAIIMVAVFSGFIFSHDIMIKQIGFALAAGIL
IDAFLVRLTLVPALMAAFDERAWWLPRWLDHLLPDLDIEGDKLLAMLNQQAEPTDREDNDIRSR

Sequences:

>Translated_784_residues
MSTFLYRLGRTAFGKPWLFVAGWVAVLAVVVGGMAINGVSVSSEMKIEGTEAQTVLDRVADELPEASGGQASVVFTVPDG
ERLDTPERLAVISGTVSDVYDLEKVVNPLDAALGAAEQGGPGTPQENAPGDPPAGSDQEPAQEQGPPYQPLLVDGEPVPG
VLVSSDGQVALFQFQFTVAATSLTDDDVTSVVEVVERAEQGTGMTVLPSDSLKALEIPIGIGEVIGLAVAALVLVLTLGS
LVAAGLPLITALVGVGIGVGGAYALSNVVEMNSATPVLGLMVGLAVGIDYALFVVNRQRRLILDQGLTAQEAAGRAVGTA
GSAVFFAGLTVLIALTALTVIGIAVLSTMALVAASTVALAVLIALSLLPALLGLVGERICSDKARARRRTKVEAESHGVA
DHWVKGVIRFRWPVIAGVVAILGVMAIPAASMHLGIPSGATANQDTAARQSYEAVSQGFGEGFNGPLLVTAEPVGTSGRV
TPELTAKLIGEFQDRGDIVLAAPVGVNEAGDLAVFSIIPASGPDDEATSDLVKSLREPGNAIAQRNQVQLGVTGFTAIRI
DMSDKIAGVLPLYLGIIIILSILILMLVFRSVVVPIKATAGFLLSILATFGATTAVFQWGWLSGLFGFDTGGPLMSFMPI
IVTGILYGLAMDYEVFLVSSMREAHIHGQAARQSVVHGFDQASRVVVAAAIIMVAVFSGFIFSHDIMIKQIGFALAAGIL
IDAFLVRLTLVPALMAAFDERAWWLPRWLDHLLPDLDIEGDKLLAMLNQQAEPTDREDNDIRSR
>Mature_783_residues
STFLYRLGRTAFGKPWLFVAGWVAVLAVVVGGMAINGVSVSSEMKIEGTEAQTVLDRVADELPEASGGQASVVFTVPDGE
RLDTPERLAVISGTVSDVYDLEKVVNPLDAALGAAEQGGPGTPQENAPGDPPAGSDQEPAQEQGPPYQPLLVDGEPVPGV
LVSSDGQVALFQFQFTVAATSLTDDDVTSVVEVVERAEQGTGMTVLPSDSLKALEIPIGIGEVIGLAVAALVLVLTLGSL
VAAGLPLITALVGVGIGVGGAYALSNVVEMNSATPVLGLMVGLAVGIDYALFVVNRQRRLILDQGLTAQEAAGRAVGTAG
SAVFFAGLTVLIALTALTVIGIAVLSTMALVAASTVALAVLIALSLLPALLGLVGERICSDKARARRRTKVEAESHGVAD
HWVKGVIRFRWPVIAGVVAILGVMAIPAASMHLGIPSGATANQDTAARQSYEAVSQGFGEGFNGPLLVTAEPVGTSGRVT
PELTAKLIGEFQDRGDIVLAAPVGVNEAGDLAVFSIIPASGPDDEATSDLVKSLREPGNAIAQRNQVQLGVTGFTAIRID
MSDKIAGVLPLYLGIIIILSILILMLVFRSVVVPIKATAGFLLSILATFGATTAVFQWGWLSGLFGFDTGGPLMSFMPII
VTGILYGLAMDYEVFLVSSMREAHIHGQAARQSVVHGFDQASRVVVAAAIIMVAVFSGFIFSHDIMIKQIGFALAAGILI
DAFLVRLTLVPALMAAFDERAWWLPRWLDHLLPDLDIEGDKLLAMLNQQAEPTDREDNDIRSR

Specific function: Unknown

COG id: COG2409

COG function: function code R; Predicted drug exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 81793; Mature: 81662

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFLYRLGRTAFGKPWLFVAGWVAVLAVVVGGMAINGVSVSSEMKIEGTEAQTVLDRVA
CCHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCHHCCCEEECCCEEECCCHHHHHHHHHH
DELPEASGGQASVVFTVPDGERLDTPERLAVISGTVSDVYDLEKVVNPLDAALGAAEQGG
HHCCCCCCCCEEEEEECCCCCCCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHCCCCCCC
PGTPQENAPGDPPAGSDQEPAQEQGPPYQPLLVDGEPVPGVLVSSDGQVALFQFQFTVAA
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCEEECCCCCEEEEEEEEEEEE
TSLTDDDVTSVVEVVERAEQGTGMTVLPSDSLKALEIPIGIGEVIGLAVAALVLVLTLGS
CCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
LVAAGLPLITALVGVGIGVGGAYALSNVVEMNSATPVLGLMVGLAVGIDYALFVVNRQRR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCHH
LILDQGLTAQEAAGRAVGTAGSAVFFAGLTVLIALTALTVIGIAVLSTMALVAASTVALA
HHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIALSLLPALLGLVGERICSDKARARRRTKVEAESHGVADHWVKGVIRFRWPVIAGVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
ILGVMAIPAASMHLGIPSGATANQDTAARQSYEAVSQGFGEGFNGPLLVTAEPVGTSGRV
HHHHHHHCCHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
TPELTAKLIGEFQDRGDIVLAAPVGVNEAGDLAVFSIIPASGPDDEATSDLVKSLREPGN
CHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCH
AIAQRNQVQLGVTGFTAIRIDMSDKIAGVLPLYLGIIIILSILILMLVFRSVVVPIKATA
HHHCCCCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFLLSILATFGATTAVFQWGWLSGLFGFDTGGPLMSFMPIIVTGILYGLAMDYEVFLVSS
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MREAHIHGQAARQSVVHGFDQASRVVVAAAIIMVAVFSGFIFSHDIMIKQIGFALAAGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDAFLVRLTLVPALMAAFDERAWWLPRWLDHLLPDLDIEGDKLLAMLNQQAEPTDREDND
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
IRSR
CCCC
>Mature Secondary Structure 
STFLYRLGRTAFGKPWLFVAGWVAVLAVVVGGMAINGVSVSSEMKIEGTEAQTVLDRVA
CHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCHHCCCEEECCCEEECCCHHHHHHHHHH
DELPEASGGQASVVFTVPDGERLDTPERLAVISGTVSDVYDLEKVVNPLDAALGAAEQGG
HHCCCCCCCCEEEEEECCCCCCCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHCCCCCCC
PGTPQENAPGDPPAGSDQEPAQEQGPPYQPLLVDGEPVPGVLVSSDGQVALFQFQFTVAA
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCEEECCCCCEEEEEEEEEEEE
TSLTDDDVTSVVEVVERAEQGTGMTVLPSDSLKALEIPIGIGEVIGLAVAALVLVLTLGS
CCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
LVAAGLPLITALVGVGIGVGGAYALSNVVEMNSATPVLGLMVGLAVGIDYALFVVNRQRR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCHH
LILDQGLTAQEAAGRAVGTAGSAVFFAGLTVLIALTALTVIGIAVLSTMALVAASTVALA
HHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIALSLLPALLGLVGERICSDKARARRRTKVEAESHGVADHWVKGVIRFRWPVIAGVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
ILGVMAIPAASMHLGIPSGATANQDTAARQSYEAVSQGFGEGFNGPLLVTAEPVGTSGRV
HHHHHHHCCHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
TPELTAKLIGEFQDRGDIVLAAPVGVNEAGDLAVFSIIPASGPDDEATSDLVKSLREPGN
CHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCH
AIAQRNQVQLGVTGFTAIRIDMSDKIAGVLPLYLGIIIILSILILMLVFRSVVVPIKATA
HHHCCCCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFLLSILATFGATTAVFQWGWLSGLFGFDTGGPLMSFMPIIVTGILYGLAMDYEVFLVSS
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MREAHIHGQAARQSVVHGFDQASRVVVAAAIIMVAVFSGFIFSHDIMIKQIGFALAAGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDAFLVRLTLVPALMAAFDERAWWLPRWLDHLLPDLDIEGDKLLAMLNQQAEPTDREDND
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
IRSR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]