Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716400

Identifier: 119716400

GI number: 119716400

Start: 2321788

End: 2322141

Strand: Reverse

Name: 119716400

Synonym: Noca_2170

Alternate gene names: NA

Gene position: 2322141-2321788 (Counterclockwise)

Preceding gene: 119716402

Following gene: 119716399

Centisome position: 46.57

GC content: 69.77

Gene sequence:

>354_bases
GTGGACCCGGACATCCCTCAGCGGCTATCACGCCAGTTGTTGGACGAATGCTGCGACGCGGCGCACTGGCTGGCGTGGAA
CGCCTTGACCGGCTTGGTCGCCATGGGTCTCTCGACAAGCGGACACGTGCTGACGCCCGAGGAGTGGGCCCTTGCGGTGG
GCCCCGCCCCGCGGCGGGGCGATAAGCGGCTAGCTCGAGAAGCCAAGGAAGGCATCCGGCAGATCGAGTCGTTCCTCGGC
AACGCCGACCCCGTGACTCCGCCGACGATGGTCCGACCACCGCAATCGCGGCCCCCCGCAGCGCGACGCGATCGGCGACG
CCGCGAGTCGAGTCGACGACGGGCTCCCCACTGA

Upstream 100 bases:

>100_bases
CGGGTGCTTGCAGGGCTCTCGAAGACGGCGTAACGTCAAAGTCCTTGGCAAAGCCAAGCATCAGGGCTTGACTTGAAGGT
CGTCGACCGAGGTGACGACA

Downstream 100 bases:

>100_bases
CCGCCGCCGGACCGCTTGGACGGGTGACGTGGGCCGCCTCTCCCAACCCTCTACGACGATGTGAACAGCCAAGACAGGAA
GTGGTCGATGAAGCAGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MDPDIPQRLSRQLLDECCDAAHWLAWNALTGLVAMGLSTSGHVLTPEEWALAVGPAPRRGDKRLAREAKEGIRQIESFLG
NADPVTPPTMVRPPQSRPPAARRDRRRRESSRRRAPH

Sequences:

>Translated_117_residues
MDPDIPQRLSRQLLDECCDAAHWLAWNALTGLVAMGLSTSGHVLTPEEWALAVGPAPRRGDKRLAREAKEGIRQIESFLG
NADPVTPPTMVRPPQSRPPAARRDRRRRESSRRRAPH
>Mature_117_residues
MDPDIPQRLSRQLLDECCDAAHWLAWNALTGLVAMGLSTSGHVLTPEEWALAVGPAPRRGDKRLAREAKEGIRQIESFLG
NADPVTPPTMVRPPQSRPPAARRDRRRRESSRRRAPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13105; Mature: 13105

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPDIPQRLSRQLLDECCDAAHWLAWNALTGLVAMGLSTSGHVLTPEEWALAVGPAPRRG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHCEEECCCCCCCH
DKRLAREAKEGIRQIESFLGNADPVTPPTMVRPPQSRPPAARRDRRRRESSRRRAPH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDPDIPQRLSRQLLDECCDAAHWLAWNALTGLVAMGLSTSGHVLTPEEWALAVGPAPRRG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHCEEECCCCCCCH
DKRLAREAKEGIRQIESFLGNADPVTPPTMVRPPQSRPPAARRDRRRRESSRRRAPH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA