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The map label for this gene is 119716403

Identifier: 119716403

GI number: 119716403

Start: 2326903

End: 2327505

Strand: Reverse

Name: 119716403

Synonym: Noca_2173

Alternate gene names: NA

Gene position: 2327505-2326903 (Counterclockwise)

Preceding gene: 119716405

Following gene: 119716402

Centisome position: 46.68

GC content: 65.01

Gene sequence:

>603_bases
ATGGATCGTGGTTTGCGAGACCTCAAGCGTGAGGCGACAAGACAGGCGCTGGCTCAAGCGGCTTTCGAGTTGGCCCGCGA
GCGAGGGCTGTTCGGGTTCGTGACAACGGACGTGGTGGAGCGGGCGGGATACTCGCGGCGAACGTTCGCGAACCACTTTT
CCTGCAAGGAGGAAGCAGTCGCTTCGGTCGCGTTCGGTGGTGTCGACGACGCCAGCGCGATCCTCGCCGGCCTACCTGCG
GACCTGCCCCTGCTCGATGCTCTGTTGGCGGTGATGCGGGATCAGTTCGCCGCGGACACGCTGGTCAGGATGCGCGAACT
GATGGCGATGGCGCGGCATTACCCGACCCTGGAACCCTACGTCCTGGGCGTTCAGCAACGCATGCGCCACACCGCACAGG
AACTCTTGGGATCCGTGGCCGGGGACCGGTACCCCGCCATCTACGTACCGCTGCTGTTTGGCGCCGTGTACGGCGCCGTG
ATGGCCGCCCTAGAGGGAACCCTCGACGTGCACCTGGACGGCGAGAACGACCTCAGCCCCGTGTCGATGGACTACGACTC
GTTCCTCGACCTCACCTTCGACTACCTACGCCACGGCCTCTAG

Upstream 100 bases:

>100_bases
GCCGGCGGGCAGCTGCATTGCCGAAGGAACGGCCGGGCCGCATGTCTACCTGCCCATTGGGCAATGTTGCTCGATGGGCA
GAGCTGGGCATACTGAGGCA

Downstream 100 bases:

>100_bases
CCAGCGACTCCACGCCCTCTAGGAGAACCAGACCGATGTCAACCTTCCTGTACCGGCTCGGAAGAACCGCGTTCGGCAAA
CCGTGGCTGTTCGTCGCCGG

Product: regulatory protein TetR

Products: NA

Alternate protein names: Regulatory Protein TetR

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MDRGLRDLKREATRQALAQAAFELARERGLFGFVTTDVVERAGYSRRTFANHFSCKEEAVASVAFGGVDDASAILAGLPA
DLPLLDALLAVMRDQFAADTLVRMRELMAMARHYPTLEPYVLGVQQRMRHTAQELLGSVAGDRYPAIYVPLLFGAVYGAV
MAALEGTLDVHLDGENDLSPVSMDYDSFLDLTFDYLRHGL

Sequences:

>Translated_200_residues
MDRGLRDLKREATRQALAQAAFELARERGLFGFVTTDVVERAGYSRRTFANHFSCKEEAVASVAFGGVDDASAILAGLPA
DLPLLDALLAVMRDQFAADTLVRMRELMAMARHYPTLEPYVLGVQQRMRHTAQELLGSVAGDRYPAIYVPLLFGAVYGAV
MAALEGTLDVHLDGENDLSPVSMDYDSFLDLTFDYLRHGL
>Mature_200_residues
MDRGLRDLKREATRQALAQAAFELARERGLFGFVTTDVVERAGYSRRTFANHFSCKEEAVASVAFGGVDDASAILAGLPA
DLPLLDALLAVMRDQFAADTLVRMRELMAMARHYPTLEPYVLGVQQRMRHTAQELLGSVAGDRYPAIYVPLLFGAVYGAV
MAALEGTLDVHLDGENDLSPVSMDYDSFLDLTFDYLRHGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22032; Mature: 22032

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRGLRDLKREATRQALAQAAFELARERGLFGFVTTDVVERAGYSRRTFANHFSCKEEAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ASVAFGGVDDASAILAGLPADLPLLDALLAVMRDQFAADTLVRMRELMAMARHYPTLEPY
HHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
VLGVQQRMRHTAQELLGSVAGDRYPAIYVPLLFGAVYGAVMAALEGTLDVHLDGENDLSP
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC
VSMDYDSFLDLTFDYLRHGL
CCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDRGLRDLKREATRQALAQAAFELARERGLFGFVTTDVVERAGYSRRTFANHFSCKEEAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ASVAFGGVDDASAILAGLPADLPLLDALLAVMRDQFAADTLVRMRELMAMARHYPTLEPY
HHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
VLGVQQRMRHTAQELLGSVAGDRYPAIYVPLLFGAVYGAVMAALEGTLDVHLDGENDLSP
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC
VSMDYDSFLDLTFDYLRHGL
CCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA