Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715419

Identifier: 119715419

GI number: 119715419

Start: 1255989

End: 1257335

Strand: Direct

Name: 119715419

Synonym: Noca_1183

Alternate gene names: NA

Gene position: 1255989-1257335 (Clockwise)

Preceding gene: 119715418

Following gene: 119715420

Centisome position: 25.19

GC content: 68.15

Gene sequence:

>1347_bases
ATGAAGCGTTCGGTCCCGGTAGGCCGCGCACTCGTTGCGCTGCTCGCCATCACGCTGGTGGCCGCTGGCTGCACCACCAG
CTCCGGCAAGGAGAAGGAGGCGACAGACGATGTGGCGGTCTGCGAGCTCGCCTACTACACCGGCGAGTTCGGCTCCTACG
GCGAGTCCTTGACCGCCGATGTCGTGTTCCCGGTCGAAGAGGTCATCAACGAGGATCCGCCGCTCGGCCGGTCCTGGAAG
CTGTTCCACGAGGACCTCGGCACGGTGGGTGAGGCGCAGGCCGCGCGCACCTGCCTGGACCGGCACGGTGCGGAGATCCT
GGTCAGCATCGCTCACGGCTACCGGACCTACCGCGACCTCATGATGGAGCGTTGGCAGGAGGAGGACAGCCCCCTCGCAC
CCTCGGTTCACGGTGGGGCGATCCCTGGGAACCTCGGCGGCAAGGTCGAGGAGCCCATCTTCCGCGCTCAGGGGCTGGAC
GAGACGCTCGGCATGACCGGCGCGCTCTACGCCGAGCAGATCGGCGCCAAGTCGGTGGCCATCTTCGCCACCAACGTCGA
AGGCTTCCAGCTGGCGGCGGACGCCGCCGAGCGGACCGCCGAGTACCTCGGCCTCGAGGTCCTCGAGCGGATCGATGCCG
GTGCCGAGCAGCCCTCCTACGTTGCCGAGGCTCGGAGGATCGCGGACCTCAACCCCGACGCGGTCATCGTCCAGGCCGGT
TCCGTGGAGTCCGCAACGCTGATCAAGCAGGCCACCGAGGCGGGCATCTCCCTGGAGTGGATCGGCGAGACCGGGTGGGT
CCAGCCCGAGTTCATCAAGACCCTGGGCACCGGACCGCTCGCCAAGCAGAAGGGGATCGGCTTCGCCGCCTTCTCCTACA
ACGACGAGTCGCCGGCCTGGGACTTCTTCTCCGAGCTCTGGGAGAGCACACCCGGCTATGCCGACAAGTTCGGTCCGCCG
AGCGACGCCTACCACTACTCGACCTATGACCTGATGGTGCAGACCGCGCTCGCGGTCGAGGCCGGCGGCTCCTACAAGGT
GAGTGACTGGGCGCCGGCCATGCACGAGGTCGGGGAGGCTCCCGGGGAGGTTTGCTACACCTACGCGGACTGCCTCGAGC
TCATCCGGGACGGTGAGGACATCGACTACGAGGGCATCACCGGCTCCGGCGACTACACCGACGGCGGCGTGAACCAGATC
GTCCAGGCCTACACGCCCTTCGCCGAGGACGGCAGCCACGGGGAGCCGGTGGAGCTCGACGGCGAGCGTGCCATGGAGGT
CGTCGAGGCCATCGCCACCGAGGCGAAGTGCGACCCGGAGAACCCGCCGAACGTCTGCGAGTGGTGA

Upstream 100 bases:

>100_bases
GTCGGCCGTGATGGAGGCATCCGAGCTCACCACTGAGCAGCTGAAGCACGCCTATCAGATCTGACCAGGAAAGAACTGGC
ACGGAGAGAGGAACACCCCG

Downstream 100 bases:

>100_bases
GCCCCTTCGCCACTGCCTGATCGGCAGTCGCCCGCAGCCCGGGGCAGCAGTCCCGGGCTGCGGGGGTCCGAGCCTTGACG
AGTGACCCACGTCACTTTAG

Product: ABC-type branched-chain amino acid transport systems periplasmic component-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MKRSVPVGRALVALLAITLVAAGCTTSSGKEKEATDDVAVCELAYYTGEFGSYGESLTADVVFPVEEVINEDPPLGRSWK
LFHEDLGTVGEAQAARTCLDRHGAEILVSIAHGYRTYRDLMMERWQEEDSPLAPSVHGGAIPGNLGGKVEEPIFRAQGLD
ETLGMTGALYAEQIGAKSVAIFATNVEGFQLAADAAERTAEYLGLEVLERIDAGAEQPSYVAEARRIADLNPDAVIVQAG
SVESATLIKQATEAGISLEWIGETGWVQPEFIKTLGTGPLAKQKGIGFAAFSYNDESPAWDFFSELWESTPGYADKFGPP
SDAYHYSTYDLMVQTALAVEAGGSYKVSDWAPAMHEVGEAPGEVCYTYADCLELIRDGEDIDYEGITGSGDYTDGGVNQI
VQAYTPFAEDGSHGEPVELDGERAMEVVEAIATEAKCDPENPPNVCEW

Sequences:

>Translated_448_residues
MKRSVPVGRALVALLAITLVAAGCTTSSGKEKEATDDVAVCELAYYTGEFGSYGESLTADVVFPVEEVINEDPPLGRSWK
LFHEDLGTVGEAQAARTCLDRHGAEILVSIAHGYRTYRDLMMERWQEEDSPLAPSVHGGAIPGNLGGKVEEPIFRAQGLD
ETLGMTGALYAEQIGAKSVAIFATNVEGFQLAADAAERTAEYLGLEVLERIDAGAEQPSYVAEARRIADLNPDAVIVQAG
SVESATLIKQATEAGISLEWIGETGWVQPEFIKTLGTGPLAKQKGIGFAAFSYNDESPAWDFFSELWESTPGYADKFGPP
SDAYHYSTYDLMVQTALAVEAGGSYKVSDWAPAMHEVGEAPGEVCYTYADCLELIRDGEDIDYEGITGSGDYTDGGVNQI
VQAYTPFAEDGSHGEPVELDGERAMEVVEAIATEAKCDPENPPNVCEW
>Mature_448_residues
MKRSVPVGRALVALLAITLVAAGCTTSSGKEKEATDDVAVCELAYYTGEFGSYGESLTADVVFPVEEVINEDPPLGRSWK
LFHEDLGTVGEAQAARTCLDRHGAEILVSIAHGYRTYRDLMMERWQEEDSPLAPSVHGGAIPGNLGGKVEEPIFRAQGLD
ETLGMTGALYAEQIGAKSVAIFATNVEGFQLAADAAERTAEYLGLEVLERIDAGAEQPSYVAEARRIADLNPDAVIVQAG
SVESATLIKQATEAGISLEWIGETGWVQPEFIKTLGTGPLAKQKGIGFAAFSYNDESPAWDFFSELWESTPGYADKFGPP
SDAYHYSTYDLMVQTALAVEAGGSYKVSDWAPAMHEVGEAPGEVCYTYADCLELIRDGEDIDYEGITGSGDYTDGGVNQI
VQAYTPFAEDGSHGEPVELDGERAMEVVEAIATEAKCDPENPPNVCEW

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48085; Mature: 48085

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSVPVGRALVALLAITLVAAGCTTSSGKEKEATDDVAVCELAYYTGEFGSYGESLTAD
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHH
VVFPVEEVINEDPPLGRSWKLFHEDLGTVGEAQAARTCLDRHGAEILVSIAHGYRTYRDL
EEECHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHEEHHHHHHHHHHHHH
MMERWQEEDSPLAPSVHGGAIPGNLGGKVEEPIFRAQGLDETLGMTGALYAEQIGAKSVA
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCHHHHHHHHHCCCEEE
IFATNVEGFQLAADAAERTAEYLGLEVLERIDAGAEQPSYVAEARRIADLNPDAVIVQAG
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECC
SVESATLIKQATEAGISLEWIGETGWVQPEFIKTLGTGPLAKQKGIGFAAFSYNDESPAW
CCCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHCCCCCCHHCCCEEEEEECCCCCCHH
DFFSELWESTPGYADKFGPPSDAYHYSTYDLMVQTALAVEAGGSYKVSDWAPAMHEVGEA
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCC
PGEVCYTYADCLELIRDGEDIDYEGITGSGDYTDGGVNQIVQAYTPFAEDGSHGEPVELD
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEC
GERAMEVVEAIATEAKCDPENPPNVCEW
HHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRSVPVGRALVALLAITLVAAGCTTSSGKEKEATDDVAVCELAYYTGEFGSYGESLTAD
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHH
VVFPVEEVINEDPPLGRSWKLFHEDLGTVGEAQAARTCLDRHGAEILVSIAHGYRTYRDL
EEECHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHEEHHHHHHHHHHHHH
MMERWQEEDSPLAPSVHGGAIPGNLGGKVEEPIFRAQGLDETLGMTGALYAEQIGAKSVA
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCHHHHHHHHHCCCEEE
IFATNVEGFQLAADAAERTAEYLGLEVLERIDAGAEQPSYVAEARRIADLNPDAVIVQAG
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECC
SVESATLIKQATEAGISLEWIGETGWVQPEFIKTLGTGPLAKQKGIGFAAFSYNDESPAW
CCCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHCCCCCCHHCCCEEEEEECCCCCCHH
DFFSELWESTPGYADKFGPPSDAYHYSTYDLMVQTALAVEAGGSYKVSDWAPAMHEVGEA
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCC
PGEVCYTYADCLELIRDGEDIDYEGITGSGDYTDGGVNQIVQAYTPFAEDGSHGEPVELD
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEC
GERAMEVVEAIATEAKCDPENPPNVCEW
HHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA