| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386793
Identifier: 119386793
GI number: 119386793
Start: 1241928
End: 1242326
Strand: Direct
Name: 119386793
Synonym: Pden_4086
Alternate gene names: NA
Gene position: 1241928-1242326 (Clockwise)
Preceding gene: 119386788
Following gene: 119386799
Centisome position: 71.78
GC content: 64.41
Gene sequence:
>399_bases ATGAGTGACGATCTGATTGAGCGGCTGCGCACCATCACAAGCAGCGGCTGCAATCCATATTCGGCGTGCCACGAAGCCGC CGTTGAACTCGCCCGCCTCCGCGCCGAGGTGGAGAGGCTGCGCGGGGTGCTGCGAAAGCGGACGGAGGAAGCCGACAGAG CCGACGAACGCGCCGACAAGGCCGAAGCCGCCCTAGCCGACGAGCGGGCGCATGCGGACGCGCTGGCCGCCGCCTTGCAC AATGCAGTGAAGGCGCTGGAAATGGTCACGGATCAAAACGCGATCAAGAACAGCCGCGTCGATATCGCCTTTGCTGCCTG CGTCGAGGCGGCATCGATCGGCAGAAAAGCCCTGTCGGATCAAAACCCGATCAAAAACCGCGCCCGGCGTCAGGGGTGA
Upstream 100 bases:
>100_bases GGCAATGGTGGGAGGGTGGATGGGTTGATAGCATGAGCGAATGGATTGAGCCGCAGCCCACCCACTGGCTTCCCCTCCCC CAGCCCCCGGAGGACGCGCG
Downstream 100 bases:
>100_bases CAGCCGGCCTCAAGCTGGTCCAGCAGCCGCAGCCCTGCCCGCTGGGACCGCGCCCCGCCGTCCTCGATCAGCGCGGCAGC CAGCGCCTTGCGGGACGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSDDLIERLRTITSSGCNPYSACHEAAVELARLRAEVERLRGVLRKRTEEADRADERADKAEAALADERAHADALAAALH NAVKALEMVTDQNAIKNSRVDIAFAACVEAASIGRKALSDQNPIKNRARRQG
Sequences:
>Translated_132_residues MSDDLIERLRTITSSGCNPYSACHEAAVELARLRAEVERLRGVLRKRTEEADRADERADKAEAALADERAHADALAAALH NAVKALEMVTDQNAIKNSRVDIAFAACVEAASIGRKALSDQNPIKNRARRQG >Mature_131_residues SDDLIERLRTITSSGCNPYSACHEAAVELARLRAEVERLRGVLRKRTEEADRADERADKAEAALADERAHADALAAALHN AVKALEMVTDQNAIKNSRVDIAFAACVEAASIGRKALSDQNPIKNRARRQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14393; Mature: 14262
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDLIERLRTITSSGCNPYSACHEAAVELARLRAEVERLRGVLRKRTEEADRADERADK CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAALADERAHADALAAALHNAVKALEMVTDQNAIKNSRVDIAFAACVEAASIGRKALSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC QNPIKNRARRQG CCHHHHHHHCCC >Mature Secondary Structure SDDLIERLRTITSSGCNPYSACHEAAVELARLRAEVERLRGVLRKRTEEADRADERADK CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAALADERAHADALAAALHNAVKALEMVTDQNAIKNSRVDIAFAACVEAASIGRKALSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC QNPIKNRARRQG CCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA