Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is 118580909

Identifier: 118580909

GI number: 118580909

Start: 2704204

End: 2705490

Strand: Reverse

Name: 118580909

Synonym: Ppro_2496

Alternate gene names: NA

Gene position: 2705490-2704204 (Counterclockwise)

Preceding gene: 118580910

Following gene: 118580908

Centisome position: 67.5

GC content: 66.51

Gene sequence:

>1287_bases
ATGATTCTGTTTCGCACCCCCACCCATCGCCTGTTCGTGGCCTGTATCCTGCTCTTTCCCCTGCTGTCCGCCTGCACCGC
TTTCTCCGCATGGGATACATCGTGGCAGCGCGGGGATGCGCCGCCGCCCGCCCCTCTGGCCGTGGAGCGTTCCCCGGTGC
CAGCCGCTTCCGAAATGCCGGCAGGCGAAATCCCGGTTGCAGCTCCCCAGTTGCCGGACACCGTCGATCCCCCTCTGCCG
GACCCTGGACGCCCGCCGGTTGTCAGCCAGGGCGATATCAGCTACGAAAATACCACCATAACCGAGGATGTGGTCTGGAG
CGGGAGCGTGCTGGTGCGGGGATACCTGGTGATCGCTTCCCCGGCGACCGTGCGCATCGAACCGGGCACGGTGGTGCGTT
TCATGAAATCGCTCCTTTCGCGGCAGACGCCCCGTCTGGTGGTCATGGGCAGGCTGCACTGCAACGGCTCTGCGGGGCAA
CCGGTGCGCTTCACCCCCAACGTTGCCCGGCCCGAGCGGGGCGACTGGGGGGGGATCCTGCTGCTGTCCAGCGAGAAGCG
CAACCAGTTGGACCATGTGCTCATCGAGGGGGCCACGGCGGGAATCGAGGCCGGTTTCTCAACCCTTTCCGCCACCGATG
TCGCCATCCGCCGCTGCACCGTCGGCATGCTGCTGAGGGACAGCAGCGCGAGCCTCAGCGCCGCCAGCGTTGATGACTGC
GAGACCGGGCTTGAACTCCTCGACAGCGAGGTCGACCTGCGGGACAGCGCCCTGAGCAGCAACCAGCGCGGCATTGTCGC
TCGCCGCACCACCCTGGTCCTGCTCGCCGTCTCCCTCAGGGAGAACCAGCAGAGTGGCGTAACCGCGCTCGACTGCCGGG
TCAGATTCACCTCCTGTCAACTGGCTGCCAACGGAGGCGGCGGCGCGCATCTGGCGGAAAGCGAGGGGAATATATCCGGG
TCGCGTTTCGTGGCCAACCGTGGCGTCGGCCTGGAGCTGGTCTCTTCGCGCCTCAAGGTTCAGGGGAGTCTGTTTACGGC
TACGGCCGGCGACGGCATGCGGGTCAACGACGGCCGCAGCCTGGTCTGGGGCAACTCCTTCGAGGGGAACAGCGGCTACA
ACCTGGCCATCAGCGGCCATGACCGCATCGTTGCCGTGGGGAACTGGTGGGGCAGCGACCAGGAATCCAGTATTGCGGCG
AAACTGCTGGACGGGACCAAGGACCCCCGCGGCGGCCGGGTCGAGTTCTTCCCCTGGCTGGTGCAGCGGCCGGTAAACGT
ACCATGA

Upstream 100 bases:

>100_bases
CCTGTTCCATTACCCTGCTGGCCATGGCCGACCAGCTGCTCTACCAGGCCAAGCGGACTGGGCGGAACCGCGTCCTGGTG
GCGGAGGATGATGCCGCTTG

Downstream 100 bases:

>100_bases
CCTCCCGTTCCCCCCTCACCATCTATCTGGATAACGCGGCCACGTCCCACCCCAAGCCGGAATGCGTCTACCAGGCCGTC
GTGCATGCCATGCGCCACAT

Product: putative lipoprotein

Products: NA

Alternate protein names: Parallel Beta-Helix Repeat-Containing Protein; Parallel Beta-Helix Repeat Protein

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MILFRTPTHRLFVACILLFPLLSACTAFSAWDTSWQRGDAPPPAPLAVERSPVPAASEMPAGEIPVAAPQLPDTVDPPLP
DPGRPPVVSQGDISYENTTITEDVVWSGSVLVRGYLVIASPATVRIEPGTVVRFMKSLLSRQTPRLVVMGRLHCNGSAGQ
PVRFTPNVARPERGDWGGILLLSSEKRNQLDHVLIEGATAGIEAGFSTLSATDVAIRRCTVGMLLRDSSASLSAASVDDC
ETGLELLDSEVDLRDSALSSNQRGIVARRTTLVLLAVSLRENQQSGVTALDCRVRFTSCQLAANGGGGAHLAESEGNISG
SRFVANRGVGLELVSSRLKVQGSLFTATAGDGMRVNDGRSLVWGNSFEGNSGYNLAISGHDRIVAVGNWWGSDQESSIAA
KLLDGTKDPRGGRVEFFPWLVQRPVNVP

Sequences:

>Translated_428_residues
MILFRTPTHRLFVACILLFPLLSACTAFSAWDTSWQRGDAPPPAPLAVERSPVPAASEMPAGEIPVAAPQLPDTVDPPLP
DPGRPPVVSQGDISYENTTITEDVVWSGSVLVRGYLVIASPATVRIEPGTVVRFMKSLLSRQTPRLVVMGRLHCNGSAGQ
PVRFTPNVARPERGDWGGILLLSSEKRNQLDHVLIEGATAGIEAGFSTLSATDVAIRRCTVGMLLRDSSASLSAASVDDC
ETGLELLDSEVDLRDSALSSNQRGIVARRTTLVLLAVSLRENQQSGVTALDCRVRFTSCQLAANGGGGAHLAESEGNISG
SRFVANRGVGLELVSSRLKVQGSLFTATAGDGMRVNDGRSLVWGNSFEGNSGYNLAISGHDRIVAVGNWWGSDQESSIAA
KLLDGTKDPRGGRVEFFPWLVQRPVNVP
>Mature_428_residues
MILFRTPTHRLFVACILLFPLLSACTAFSAWDTSWQRGDAPPPAPLAVERSPVPAASEMPAGEIPVAAPQLPDTVDPPLP
DPGRPPVVSQGDISYENTTITEDVVWSGSVLVRGYLVIASPATVRIEPGTVVRFMKSLLSRQTPRLVVMGRLHCNGSAGQ
PVRFTPNVARPERGDWGGILLLSSEKRNQLDHVLIEGATAGIEAGFSTLSATDVAIRRCTVGMLLRDSSASLSAASVDDC
ETGLELLDSEVDLRDSALSSNQRGIVARRTTLVLLAVSLRENQQSGVTALDCRVRFTSCQLAANGGGGAHLAESEGNISG
SRFVANRGVGLELVSSRLKVQGSLFTATAGDGMRVNDGRSLVWGNSFEGNSGYNLAISGHDRIVAVGNWWGSDQESSIAA
KLLDGTKDPRGGRVEFFPWLVQRPVNVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45545; Mature: 45545

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILFRTPTHRLFVACILLFPLLSACTAFSAWDTSWQRGDAPPPAPLAVERSPVPAASEMP
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
AGEIPVAAPQLPDTVDPPLPDPGRPPVVSQGDISYENTTITEDVVWSGSVLVRGYLVIAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHEECCCEEEEEEEEEEC
PATVRIEPGTVVRFMKSLLSRQTPRLVVMGRLHCNGSAGQPVRFTPNVARPERGDWGGIL
CEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCEE
LLSSEKRNQLDHVLIEGATAGIEAGFSTLSATDVAIRRCTVGMLLRDSSASLSAASVDDC
EEECCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHH
ETGLELLDSEVDLRDSALSSNQRGIVARRTTLVLLAVSLRENQQSGVTALDCRVRFTSCQ
HHHHHHHCCCCCCHHHHHCCCCCCEEEEEEEEEEEEEEHHCCCCCCCEEEEEEEEEEEEE
LAANGGGGAHLAESEGNISGSRFVANRGVGLELVSSRLKVQGSLFTATAGDGMRVNDGRS
EEECCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHEECCEEEEEECCCCEEECCCCE
LVWGNSFEGNSGYNLAISGHDRIVAVGNWWGSDQESSIAAKLLDGTKDPRGGRVEFFPWL
EEECCCCCCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEEHHH
VQRPVNVP
HCCCCCCC
>Mature Secondary Structure
MILFRTPTHRLFVACILLFPLLSACTAFSAWDTSWQRGDAPPPAPLAVERSPVPAASEMP
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
AGEIPVAAPQLPDTVDPPLPDPGRPPVVSQGDISYENTTITEDVVWSGSVLVRGYLVIAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHEECCCEEEEEEEEEEC
PATVRIEPGTVVRFMKSLLSRQTPRLVVMGRLHCNGSAGQPVRFTPNVARPERGDWGGIL
CEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCEE
LLSSEKRNQLDHVLIEGATAGIEAGFSTLSATDVAIRRCTVGMLLRDSSASLSAASVDDC
EEECCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHH
ETGLELLDSEVDLRDSALSSNQRGIVARRTTLVLLAVSLRENQQSGVTALDCRVRFTSCQ
HHHHHHHCCCCCCHHHHHCCCCCCEEEEEEEEEEEEEEHHCCCCCCCEEEEEEEEEEEEE
LAANGGGGAHLAESEGNISGSRFVANRGVGLELVSSRLKVQGSLFTATAGDGMRVNDGRS
EEECCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHEECCEEEEEECCCCEEECCCCE
LVWGNSFEGNSGYNLAISGHDRIVAVGNWWGSDQESSIAAKLLDGTKDPRGGRVEFFPWL
EEECCCCCCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEEHHH
VQRPVNVP
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA