Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is engD [H]

Identifier: 118579184

GI number: 118579184

Start: 786267

End: 787361

Strand: Direct

Name: engD [H]

Synonym: Ppro_0746

Alternate gene names: 118579184

Gene position: 786267-787361 (Clockwise)

Preceding gene: 118579183

Following gene: 118579187

Centisome position: 19.62

GC content: 60.73

Gene sequence:

>1095_bases
ATGGGTTTCAACTGCGGTATCGTCGGTCTCCCCAATGTGGGGAAATCCACCATATTCAATGCGCTGACTTCCGCCGGCGC
CGAGTCGGCCAACTATCCTTTCTGCACCATCGACCCCAATGTGGGGATCGTGCAGGTGCCGGATCCGCGCATGGATCAGC
TGTCGGCCATCGTCAATCCGCAGCGTATCCAGCCCACCACCATTGAGTTCGTCGATATCGCCGGTCTGGTCAAGGGAGCC
AGCGCCGGGGAGGGGCTGGGCAACCAATTCCTCGGCCATATCCGCAGCGTTGATGCCATCATCCATGTGGTGCGCTGCTT
CGATGACGATAATGTGGTTCATGTCAACGGACGTGTGTCGCCGGCTGCGGACATCGATACCATCCATACCGAGTTGGGGC
TCTCCGACCTGGAGACGGTGGAGAAGAAATTGCAGCGTGCCGAAAAGGCTGGTCGGAGCGGTGATCGCAAGCTGAAAGAT
GAGGCCGCCTTCTACCAGCGGGTCAGGGATCTGCTTGATCAGGGCAAGAACGTGCGCGGCGTGGCGGAAAACGAGGACGA
GCGTCTCTGGTTGCGCGATCTGCACCTCCTGACCGACAAGCCGGTCTTGTACGTGGCCAACGTGGCCGAGGATGATCTTG
GCGGTGAACACCCCTTTGTGGGGCAGGTGCAGCAGATCGCCAGTCTGGAGGGGGCCGGTGTGGTCACCATCTGCGGCAAG
CTGGAGGCGGAGATCTCAGAACTGGAGGGTGAGGAGAAACAGGCCTTCCTCAATGACATGGGGCTTGCCGAGGCCGGCCT
TGACCGGCTGATCCGCAGTGGCTACGAACTGCTTGGCCTGATCACCTACTTCACCGCCGGGGTCAAGGAGGTGCGCGCCT
GGACCATTACCCGAGGGACCAAGGCGCCCCAGGCAGCAGGCGTGATCCACTCCGACTTCGAGAAGGGATTCATTCGCGCC
GAGGTAATCGCTTTCGACGACTTCATCGCCTGCAATGGCGAGGCGGGTGCCAAGGAGAAGGGGCTGATGCGGCTGGAGGG
GAAGGAGTACGTTGTCAGGGATGGCGATGTGATGCACTTCCGCTTCAACGTCTGA

Upstream 100 bases:

>100_bases
CTGGAAATGCTGCTGGATCAGGGGCTGCCGAAGGCCATGAGTCTGTTCAATAATAGAAATTTCCTGGAAAAGTGATTTCC
CAGATGAAAGGCGAGTCTTT

Downstream 100 bases:

>100_bases
CAGTCGGCATAAACATGAGGCAGGAAAAAGCCACCCCCGATTCCCCGCAACAGCGGGTCGAGGGTGGCTATTTTTGTGGC
GCTACGGGAAAACGCTCAGT

Product: GTP-dependent nucleic acid-binding protein EngD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MGFNCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDPRMDQLSAIVNPQRIQPTTIEFVDIAGLVKGA
SAGEGLGNQFLGHIRSVDAIIHVVRCFDDDNVVHVNGRVSPAADIDTIHTELGLSDLETVEKKLQRAEKAGRSGDRKLKD
EAAFYQRVRDLLDQGKNVRGVAENEDERLWLRDLHLLTDKPVLYVANVAEDDLGGEHPFVGQVQQIASLEGAGVVTICGK
LEAEISELEGEEKQAFLNDMGLAEAGLDRLIRSGYELLGLITYFTAGVKEVRAWTITRGTKAPQAAGVIHSDFEKGFIRA
EVIAFDDFIACNGEAGAKEKGLMRLEGKEYVVRDGDVMHFRFNV

Sequences:

>Translated_364_residues
MGFNCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDPRMDQLSAIVNPQRIQPTTIEFVDIAGLVKGA
SAGEGLGNQFLGHIRSVDAIIHVVRCFDDDNVVHVNGRVSPAADIDTIHTELGLSDLETVEKKLQRAEKAGRSGDRKLKD
EAAFYQRVRDLLDQGKNVRGVAENEDERLWLRDLHLLTDKPVLYVANVAEDDLGGEHPFVGQVQQIASLEGAGVVTICGK
LEAEISELEGEEKQAFLNDMGLAEAGLDRLIRSGYELLGLITYFTAGVKEVRAWTITRGTKAPQAAGVIHSDFEKGFIRA
EVIAFDDFIACNGEAGAKEKGLMRLEGKEYVVRDGDVMHFRFNV
>Mature_363_residues
GFNCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDPRMDQLSAIVNPQRIQPTTIEFVDIAGLVKGAS
AGEGLGNQFLGHIRSVDAIIHVVRCFDDDNVVHVNGRVSPAADIDTIHTELGLSDLETVEKKLQRAEKAGRSGDRKLKDE
AAFYQRVRDLLDQGKNVRGVAENEDERLWLRDLHLLTDKPVLYVANVAEDDLGGEHPFVGQVQQIASLEGAGVVTICGKL
EAEISELEGEEKQAFLNDMGLAEAGLDRLIRSGYELLGLITYFTAGVKEVRAWTITRGTKAPQAAGVIHSDFEKGFIRAE
VIAFDDFIACNGEAGAKEKGLMRLEGKEYVVRDGDVMHFRFNV

Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]

COG id: COG0012

COG function: function code J; Predicted GTPase, probable translation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI58761500, Length=369, Percent_Identity=44.9864498644986, Blast_Score=310, Evalue=1e-84,
Organism=Homo sapiens, GI58761502, Length=220, Percent_Identity=40.4545454545455, Blast_Score=162, Evalue=5e-40,
Organism=Homo sapiens, GI24308117, Length=217, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI1787454, Length=364, Percent_Identity=59.0659340659341, Blast_Score=454, Evalue=1e-129,
Organism=Escherichia coli, GI1789574, Length=101, Percent_Identity=35.6435643564356, Blast_Score=72, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17509631, Length=366, Percent_Identity=43.1693989071038, Blast_Score=292, Evalue=2e-79,
Organism=Saccharomyces cerevisiae, GI6319499, Length=370, Percent_Identity=40.8108108108108, Blast_Score=263, Evalue=4e-71,
Organism=Saccharomyces cerevisiae, GI6321773, Length=380, Percent_Identity=36.3157894736842, Blast_Score=213, Evalue=3e-56,
Organism=Saccharomyces cerevisiae, GI6321649, Length=141, Percent_Identity=39.7163120567376, Blast_Score=81, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24640873, Length=363, Percent_Identity=44.0771349862259, Blast_Score=298, Evalue=3e-81,
Organism=Drosophila melanogaster, GI24640877, Length=363, Percent_Identity=44.0771349862259, Blast_Score=298, Evalue=3e-81,
Organism=Drosophila melanogaster, GI24640875, Length=363, Percent_Identity=44.0771349862259, Blast_Score=298, Evalue=3e-81,
Organism=Drosophila melanogaster, GI24640879, Length=325, Percent_Identity=41.8461538461538, Blast_Score=246, Evalue=3e-65,
Organism=Drosophila melanogaster, GI24585318, Length=146, Percent_Identity=30.8219178082192, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR004396
- InterPro:   IPR013029
- InterPro:   IPR006073
- InterPro:   IPR002917
- InterPro:   IPR012676
- InterPro:   IPR023192 [H]

Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]

EC number: NA

Molecular weight: Translated: 39577; Mature: 39446

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFNCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDPRMDQLSAIVNP
CCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCHHHHHHHCCC
QRIQPTTIEFVDIAGLVKGASAGEGLGNQFLGHIRSVDAIIHVVRCFDDDNVVHVNGRVS
CCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
PAADIDTIHTELGLSDLETVEKKLQRAEKAGRSGDRKLKDEAAFYQRVRDLLDQGKNVRG
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
VAENEDERLWLRDLHLLTDKPVLYVANVAEDDLGGEHPFVGQVQQIASLEGAGVVTICGK
CCCCCCCEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECH
LEAEISELEGEEKQAFLNDMGLAEAGLDRLIRSGYELLGLITYFTAGVKEVRAWTITRGT
HHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
KAPQAAGVIHSDFEKGFIRAEVIAFDDFIACNGEAGAKEKGLMRLEGKEYVVRDGDVMHF
CCCHHHCCHHHHHHCCCEEEEEEEEECEEEECCCCCCCCCCCEEECCCEEEEECCCEEEE
RFNV
EECC
>Mature Secondary Structure 
GFNCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDPRMDQLSAIVNP
CCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCHHHHHHHCCC
QRIQPTTIEFVDIAGLVKGASAGEGLGNQFLGHIRSVDAIIHVVRCFDDDNVVHVNGRVS
CCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
PAADIDTIHTELGLSDLETVEKKLQRAEKAGRSGDRKLKDEAAFYQRVRDLLDQGKNVRG
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
VAENEDERLWLRDLHLLTDKPVLYVANVAEDDLGGEHPFVGQVQQIASLEGAGVVTICGK
CCCCCCCEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECH
LEAEISELEGEEKQAFLNDMGLAEAGLDRLIRSGYELLGLITYFTAGVKEVRAWTITRGT
HHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
KAPQAAGVIHSDFEKGFIRAEVIAFDDFIACNGEAGAKEKGLMRLEGKEYVVRDGDVMHF
CCCHHHCCHHHHHHCCCEEEEEEEEECEEEECCCCCCCCCCCEEECCCEEEEECCCEEEE
RFNV
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA