Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118578959

Identifier: 118578959

GI number: 118578959

Start: 550874

End: 552391

Strand: Reverse

Name: 118578959

Synonym: Ppro_0520

Alternate gene names: NA

Gene position: 552391-550874 (Counterclockwise)

Preceding gene: 118578960

Following gene: 118578958

Centisome position: 13.78

GC content: 60.21

Gene sequence:

>1518_bases
ATGAGAAGATTCACCCTGGCGATCAGCCTTTTACTTTCACTCTGTTTCACCCTGTCCGTATTCGCGGCCCAGCCGCTGCG
GGTGTTTGTTTCCGACATGAACGTGGTGGGGGTCCAGAACAAAGATGAACTGAAAGCGACTCTGCAGACCCTGCTGGCTT
CGCGCCTGAACGGCGAGAACATCACCGCCGTGGCCAGTTCCGCCGAGGCCGATGCCGTGCTGACCGGGACCTACGTGGTA
ATCGGTAAGGTATTCAGCGTGGATGCCATGGCCAAAAGCGCCAACGGCAAGACCCTGACCCGCGCCTTTGTACAGGGAGA
GAGCCAGGACGAACTGATCCCGGCAATGGGCAAGCTGGCCGACAAGCTGAGCGCTGACCTCTCCAAGCTGTACGCCAGCG
GCCAGATAGCCTCCGGCGCACCCAGCTATGCCGCCACCTCCACCGTTGTGCGCCCGAACAAAGTAACCCAGGGCAACAGC
GTCCAGAGCGCCCTGGTGCGCCCGGACCAGAGCCAGGAGATCATCAGGCCGCGTGACCTGGAGCGCAACTATGTTGGCGG
CTGGCAGAGCAAGCGCCTTCCCGGAGCAGCCAACCTGCTGGCAATGGGCAAGACGCTTCCCGACGGCAGCAGGGAAGTGT
TTCTGGCTGAGGACCGCCGCCTCTCCTACTACCATCAGGCGGAAAACATGAGCCTGCGCTTTGCCACCGAATTCGGCACC
ACGGACAAGATCATCGGCCTGGACACCATCCAGGGCAGCGACGGCAAGACCGAAGTATACCTGACCATCATGCATGGCGA
AGAGCCGTCCTCCCAGATCTGGCAGGTGGGGGACAACAGGATGGAGTGCGTGGCCAAGGATCTACCCTACTACCTGCGCG
TCATCGGCCTGGCAGGCGGCCCCAAAAAGGTCTATGCCCAGTCCATGGGGCGCGAAACGGAATTCTACGGCAATGTATCC
GAGCTTACCCGCACGGGGTCGAAGGTAACCCTGTCCAACGAGATCGTGATGCCCCGCTTCGGCAACATCTTCACCTTCAA
CCAGTTCAAGGACCAGCAGGGTGTCCTGTACACCGTGGTGCTGCACCCCGACGGCTACCTGGTGGTCTTCGACCAGGAGC
AGAAGGAACTCTGGCGCAGCAACGACAAGTTCGGCGGCTCCGAGCTCTACTACCAGAAGGACAACTCGGAGAACTTCCGC
ATTACCAACGACAAGTACCGCTGGTTTTTCATGAACCAGCGCATCCAGGTAACCTCGCGCAACGAAGTGCTGGTGGGCAA
GAACGACGGCTTCTGGGTGCTGGGCAACGCCCGCTCCTACAAGAAGGGCGCCGTCTACTGCTTCATCTGGAACGGCTCCA
ACCTGGACGAGCTCTGGCACACCCGCGACACCCAGAACTACATGCCGGACTTCTATTTCGACGAGGCCAGCAGCGAACTG
CTGCTTCTGCAGACAGTACAGAGACCCGGCCTGACCACACGGGGCACCGCTTCACTGGCCATCAAGAAGGTTGAATAA

Upstream 100 bases:

>100_bases
AGTACAACCTGAAGGGCGGGAGCAATCCCGCCCTTTTTTTTTGACTTTAACAGGCAGTTTTGCGATACTCCGCAAGTTGA
CATCAAGACTCGGAGGCACC

Downstream 100 bases:

>100_bases
CCGCTTCCCCTCAGCCCCCCAAGCGGGGGCTGATTCGTGAGTTGCTCACATTCCGAGATTCCAACCCTATGAACAACAGA
CTTCCCGACATATCGCTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: FG-GAP Repeat Protein

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MRRFTLAISLLLSLCFTLSVFAAQPLRVFVSDMNVVGVQNKDELKATLQTLLASRLNGENITAVASSAEADAVLTGTYVV
IGKVFSVDAMAKSANGKTLTRAFVQGESQDELIPAMGKLADKLSADLSKLYASGQIASGAPSYAATSTVVRPNKVTQGNS
VQSALVRPDQSQEIIRPRDLERNYVGGWQSKRLPGAANLLAMGKTLPDGSREVFLAEDRRLSYYHQAENMSLRFATEFGT
TDKIIGLDTIQGSDGKTEVYLTIMHGEEPSSQIWQVGDNRMECVAKDLPYYLRVIGLAGGPKKVYAQSMGRETEFYGNVS
ELTRTGSKVTLSNEIVMPRFGNIFTFNQFKDQQGVLYTVVLHPDGYLVVFDQEQKELWRSNDKFGGSELYYQKDNSENFR
ITNDKYRWFFMNQRIQVTSRNEVLVGKNDGFWVLGNARSYKKGAVYCFIWNGSNLDELWHTRDTQNYMPDFYFDEASSEL
LLLQTVQRPGLTTRGTASLAIKKVE

Sequences:

>Translated_505_residues
MRRFTLAISLLLSLCFTLSVFAAQPLRVFVSDMNVVGVQNKDELKATLQTLLASRLNGENITAVASSAEADAVLTGTYVV
IGKVFSVDAMAKSANGKTLTRAFVQGESQDELIPAMGKLADKLSADLSKLYASGQIASGAPSYAATSTVVRPNKVTQGNS
VQSALVRPDQSQEIIRPRDLERNYVGGWQSKRLPGAANLLAMGKTLPDGSREVFLAEDRRLSYYHQAENMSLRFATEFGT
TDKIIGLDTIQGSDGKTEVYLTIMHGEEPSSQIWQVGDNRMECVAKDLPYYLRVIGLAGGPKKVYAQSMGRETEFYGNVS
ELTRTGSKVTLSNEIVMPRFGNIFTFNQFKDQQGVLYTVVLHPDGYLVVFDQEQKELWRSNDKFGGSELYYQKDNSENFR
ITNDKYRWFFMNQRIQVTSRNEVLVGKNDGFWVLGNARSYKKGAVYCFIWNGSNLDELWHTRDTQNYMPDFYFDEASSEL
LLLQTVQRPGLTTRGTASLAIKKVE
>Mature_505_residues
MRRFTLAISLLLSLCFTLSVFAAQPLRVFVSDMNVVGVQNKDELKATLQTLLASRLNGENITAVASSAEADAVLTGTYVV
IGKVFSVDAMAKSANGKTLTRAFVQGESQDELIPAMGKLADKLSADLSKLYASGQIASGAPSYAATSTVVRPNKVTQGNS
VQSALVRPDQSQEIIRPRDLERNYVGGWQSKRLPGAANLLAMGKTLPDGSREVFLAEDRRLSYYHQAENMSLRFATEFGT
TDKIIGLDTIQGSDGKTEVYLTIMHGEEPSSQIWQVGDNRMECVAKDLPYYLRVIGLAGGPKKVYAQSMGRETEFYGNVS
ELTRTGSKVTLSNEIVMPRFGNIFTFNQFKDQQGVLYTVVLHPDGYLVVFDQEQKELWRSNDKFGGSELYYQKDNSENFR
ITNDKYRWFFMNQRIQVTSRNEVLVGKNDGFWVLGNARSYKKGAVYCFIWNGSNLDELWHTRDTQNYMPDFYFDEASSEL
LLLQTVQRPGLTTRGTASLAIKKVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56360; Mature: 56360

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFTLAISLLLSLCFTLSVFAAQPLRVFVSDMNVVGVQNKDELKATLQTLLASRLNGEN
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHCCCCC
ITAVASSAEADAVLTGTYVVIGKVFSVDAMAKSANGKTLTRAFVQGESQDELIPAMGKLA
EEEEECCCCCCEEEEEEEEEEEHHHHHHHHHHCCCCCEEEHHHHCCCCCCHHHHHHHHHH
DKLSADLSKLYASGQIASGAPSYAATSTVVRPNKVTQGNSVQSALVRPDQSQEIIRPRDL
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
ERNYVGGWQSKRLPGAANLLAMGKTLPDGSREVFLAEDRRLSYYHQAENMSLRFATEFGT
CCCCCCCCCCCCCCCHHHHHEECCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEECCCC
TDKIIGLDTIQGSDGKTEVYLTIMHGEEPSSQIWQVGDNRMECVAKDLPYYLRVIGLAGG
CCCEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHCCCCHHHHHHHCCCEEEEEEECCCC
PKKVYAQSMGRETEFYGNVSELTRTGSKVTLSNEIVMPRFGNIFTFNQFKDQQGVLYTVV
CHHHHHHHCCCCCHHCCCHHHHHCCCCEEEEECCEECCCCCCEEEECCCCCCCCEEEEEE
LHPDGYLVVFDQEQKELWRSNDKFGGSELYYQKDNSENFRITNDKYRWFFMNQRIQVTSR
ECCCCEEEEEECHHHHHHCCCCCCCCCEEEEECCCCCCEEEECCCEEEEEECCEEEEECC
NEVLVGKNDGFWVLGNARSYKKGAVYCFIWNGSNLDELWHTRDTQNYMPDFYFDEASSEL
CEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCEEECCCCCCE
LLLQTVQRPGLTTRGTASLAIKKVE
EEEEECCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MRRFTLAISLLLSLCFTLSVFAAQPLRVFVSDMNVVGVQNKDELKATLQTLLASRLNGEN
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHCCCCC
ITAVASSAEADAVLTGTYVVIGKVFSVDAMAKSANGKTLTRAFVQGESQDELIPAMGKLA
EEEEECCCCCCEEEEEEEEEEEHHHHHHHHHHCCCCCEEEHHHHCCCCCCHHHHHHHHHH
DKLSADLSKLYASGQIASGAPSYAATSTVVRPNKVTQGNSVQSALVRPDQSQEIIRPRDL
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
ERNYVGGWQSKRLPGAANLLAMGKTLPDGSREVFLAEDRRLSYYHQAENMSLRFATEFGT
CCCCCCCCCCCCCCCHHHHHEECCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEECCCC
TDKIIGLDTIQGSDGKTEVYLTIMHGEEPSSQIWQVGDNRMECVAKDLPYYLRVIGLAGG
CCCEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHCCCCHHHHHHHCCCEEEEEEECCCC
PKKVYAQSMGRETEFYGNVSELTRTGSKVTLSNEIVMPRFGNIFTFNQFKDQQGVLYTVV
CHHHHHHHCCCCCHHCCCHHHHHCCCCEEEEECCEECCCCCCEEEECCCCCCCCEEEEEE
LHPDGYLVVFDQEQKELWRSNDKFGGSELYYQKDNSENFRITNDKYRWFFMNQRIQVTSR
ECCCCEEEEEECHHHHHHCCCCCCCCCEEEEECCCCCCEEEECCCEEEEEECCEEEEECC
NEVLVGKNDGFWVLGNARSYKKGAVYCFIWNGSNLDELWHTRDTQNYMPDFYFDEASSEL
CEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCEEECCCCCCE
LLLQTVQRPGLTTRGTASLAIKKVE
EEEEECCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA