Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117920256

Identifier: 117920256

GI number: 117920256

Start: 2134712

End: 2135677

Strand: Direct

Name: 117920256

Synonym: Shewana3_1809

Alternate gene names: NA

Gene position: 2134712-2135677 (Clockwise)

Preceding gene: 117920255

Following gene: 117920258

Centisome position: 42.93

GC content: 36.96

Gene sequence:

>966_bases
ATGATAAGTAATACAATTAGAACAATAATGGTACCAGATTGGGACAAGGTTGATCCGGAAATCATTGAGCTAATTAAGTC
AGGTCACATGCGGTTGCGCGAGGGTATTGTTTACTGGTCAAAAGGCAAGAAATTAATTGATGGTGCAGGGAGTATTGTTA
AACATTTACCATTCAAGGAGATGACCGTAGATCTTAGTGAGGGAGTTAACGTAGTAGAGCTCGCAAAAGCAAGCGCTGCA
GTTAAGCAAAGTATCTTTTTTGCCGCTGGCTTATCGACAGGAATCATTCTTGGTGCGATTGTTATCCAAACAGTATATTT
ATCGAAGAAACTGGAAAAAATCCAAGCATCCATCGACAAGATAGCCATCGAAATTCAAACACAAAATCAATTGTTTTATC
TTGAAAAACTTTCGTCTTATATTGGTAGTGTAATGGCTGCACATGAGTTGCTAGGTATTTATCAAGAACATGATCCTATA
CCTGAGATTGTTGGTCCTTTGTTGGTTACTTTGGCTCAACAACGTAATGAGCTTTGTACCTTTTTGATGAAATTGATCGG
GTGGATCGAGCAGCGGAATAATCGAGATGGTAAAAATACTATTACCCAAGAACACGCAGCTTTAATAATTGATTTTATCA
CTCATGTTTTAGATATGATGCCCAAAGCTATTTATATTGAGTCAACTCTTTACACTAGATTAGGTCATTACCATCATGCG
GATACCTTAGTAGAAACTGCTGGAGCTAAATATACCATGGTGCTCCAAGCTTATCGTGGTTGGGCTAGAGATTCTTACGA
CAATTTATTGACTGGTTCATCATCTAGCCACAATAATCGATTATTAACTAATAAGTTTAATGACATAAAAAGCTTACTTA
ACTCATTGGAAAACAAGATTTTGCTTGGTAAAAATGAGCAATTGAATCAGCAAGATGAGAAGCTGGTTATTGCTTTACCA
GTGTAA

Upstream 100 bases:

>100_bases
TTAACGTTACTTTACCCTGTGTTATTCATATTGCAATGCTCCGAGAACTGCGACGTAACGATAATCCATTCAAATAAGAT
CTGCTAAACAAGGAGTTGTA

Downstream 100 bases:

>100_bases
GTCAATCGTAAAGTGGCATAATTATGAAGATATAGTACAAGTCATTTCTATTGTTCTTACTGAGTTTAAGATGTTATTCC
AAGTACCATATTCACTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MISNTIRTIMVPDWDKVDPEIIELIKSGHMRLREGIVYWSKGKKLIDGAGSIVKHLPFKEMTVDLSEGVNVVELAKASAA
VKQSIFFAAGLSTGIILGAIVIQTVYLSKKLEKIQASIDKIAIEIQTQNQLFYLEKLSSYIGSVMAAHELLGIYQEHDPI
PEIVGPLLVTLAQQRNELCTFLMKLIGWIEQRNNRDGKNTITQEHAALIIDFITHVLDMMPKAIYIESTLYTRLGHYHHA
DTLVETAGAKYTMVLQAYRGWARDSYDNLLTGSSSSHNNRLLTNKFNDIKSLLNSLENKILLGKNEQLNQQDEKLVIALP
V

Sequences:

>Translated_321_residues
MISNTIRTIMVPDWDKVDPEIIELIKSGHMRLREGIVYWSKGKKLIDGAGSIVKHLPFKEMTVDLSEGVNVVELAKASAA
VKQSIFFAAGLSTGIILGAIVIQTVYLSKKLEKIQASIDKIAIEIQTQNQLFYLEKLSSYIGSVMAAHELLGIYQEHDPI
PEIVGPLLVTLAQQRNELCTFLMKLIGWIEQRNNRDGKNTITQEHAALIIDFITHVLDMMPKAIYIESTLYTRLGHYHHA
DTLVETAGAKYTMVLQAYRGWARDSYDNLLTGSSSSHNNRLLTNKFNDIKSLLNSLENKILLGKNEQLNQQDEKLVIALP
V
>Mature_321_residues
MISNTIRTIMVPDWDKVDPEIIELIKSGHMRLREGIVYWSKGKKLIDGAGSIVKHLPFKEMTVDLSEGVNVVELAKASAA
VKQSIFFAAGLSTGIILGAIVIQTVYLSKKLEKIQASIDKIAIEIQTQNQLFYLEKLSSYIGSVMAAHELLGIYQEHDPI
PEIVGPLLVTLAQQRNELCTFLMKLIGWIEQRNNRDGKNTITQEHAALIIDFITHVLDMMPKAIYIESTLYTRLGHYHHA
DTLVETAGAKYTMVLQAYRGWARDSYDNLLTGSSSSHNNRLLTNKFNDIKSLLNSLENKILLGKNEQLNQQDEKLVIALP
V

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36027; Mature: 36027

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNTIRTIMVPDWDKVDPEIIELIKSGHMRLREGIVYWSKGKKLIDGAGSIVKHLPFKE
CCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHCEEEECCCCCHHHHHHHHHHHCCHHH
MTVDLSEGVNVVELAKASAAVKQSIFFAAGLSTGIILGAIVIQTVYLSKKLEKIQASIDK
HEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAIEIQTQNQLFYLEKLSSYIGSVMAAHELLGIYQEHDPIPEIVGPLLVTLAQQRNELCT
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FLMKLIGWIEQRNNRDGKNTITQEHAALIIDFITHVLDMMPKAIYIESTLYTRLGHYHHA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHCCHHHH
DTLVETAGAKYTMVLQAYRGWARDSYDNLLTGSSSSHNNRLLTNKFNDIKSLLNSLENKI
HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCE
LLGKNEQLNQQDEKLVIALPV
EECCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MISNTIRTIMVPDWDKVDPEIIELIKSGHMRLREGIVYWSKGKKLIDGAGSIVKHLPFKE
CCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHCEEEECCCCCHHHHHHHHHHHCCHHH
MTVDLSEGVNVVELAKASAAVKQSIFFAAGLSTGIILGAIVIQTVYLSKKLEKIQASIDK
HEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAIEIQTQNQLFYLEKLSSYIGSVMAAHELLGIYQEHDPIPEIVGPLLVTLAQQRNELCT
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FLMKLIGWIEQRNNRDGKNTITQEHAALIIDFITHVLDMMPKAIYIESTLYTRLGHYHHA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHCCHHHH
DTLVETAGAKYTMVLQAYRGWARDSYDNLLTGSSSSHNNRLLTNKFNDIKSLLNSLENKI
HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCE
LLGKNEQLNQQDEKLVIALPV
EECCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA