| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621602
Identifier: 117621602
GI number: 117621602
Start: 23444
End: 23638
Strand: Direct
Name: 117621602
Synonym: BAPKO_2031
Alternate gene names: NA
Gene position: 23444-23638 (Clockwise)
Preceding gene: 117621601
Following gene: 117621603
Centisome position: 39.1
GC content: 29.74
Gene sequence:
>195_bases ATGAGAATGGCCTTTTTACTTTTTTTTTTAATATGGCTTTTTGGTTGTAGTTCTTTTAATGCGCACAATAAAGATTCATT AGCATCCCATAATAAGGAGAAAACCTCTAATTATAACAGAGAATATTATCAGAGGAACAGAGAAAAACTTAAATTAAGAG CAAGAGAGCGATATCGTAGAAATAGAAGGAATTAA
Upstream 100 bases:
>100_bases AGTTGATTATAAAAATGTATTATTTAATAGTTTTGATAATTTAAAAAGACCAATTAGGCATTTTTTATCTATTCAAATTG TATTTCAAGGAGAGAGAAAT
Downstream 100 bases:
>100_bases ATTAAATATAAAGAATTAAACTTATTAAAAATTTGAAAGTAATTTTAATATTAAGCAATATATTTAAGTTGATTGGTGAA TTTATGTAAAAGATAGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MRMAFLLFFLIWLFGCSSFNAHNKDSLASHNKEKTSNYNREYYQRNREKLKLRARERYRRNRRN
Sequences:
>Translated_64_residues MRMAFLLFFLIWLFGCSSFNAHNKDSLASHNKEKTSNYNREYYQRNREKLKLRARERYRRNRRN >Mature_64_residues MRMAFLLFFLIWLFGCSSFNAHNKDSLASHNKEKTSNYNREYYQRNREKLKLRARERYRRNRRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8047; Mature: 8047
Theoretical pI: Translated: 11.50; Mature: 11.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMAFLLFFLIWLFGCSSFNAHNKDSLASHNKEKTSNYNREYYQRNREKLKLRARERYRR CHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH NRRN CCCC >Mature Secondary Structure MRMAFLLFFLIWLFGCSSFNAHNKDSLASHNKEKTSNYNREYYQRNREKLKLRARERYRR CHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH NRRN CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA