Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690441

Identifier: 116690441

GI number: 116690441

Start: 2685510

End: 2685923

Strand: Direct

Name: 116690441

Synonym: Bcen2424_2421

Alternate gene names: NA

Gene position: 2685510-2685923 (Clockwise)

Preceding gene: 116690440

Following gene: 116690442

Centisome position: 77.08

GC content: 68.36

Gene sequence:

>414_bases
ATGTTCCACACCGTCGAAGACACTGCCGCCCGCTTGCGCGTCCATCCGAAGACCGTCCTGCGGTTCATTCGCGACGGCAA
GCTGCGCGCGACGCGGGTCGGCCGTGCCTACCGCATCCTCGAGGCCGACCTCGCCGCGTTCGCCCGGACGGAGCCGGCCT
CGCCCGCGCCGCGTGCGGTGCGCGTCACCAGCATCGTCGACATTCCCGATGCGTCGCAGTCGCTGCACCAGTACCTGTCG
CGGTCGCTGCACGCGTTGGCGTCCGGCCGCACATCGTACGTCGACCCCGTGCGAATCGACGTCACGTTCGATCCCGCCTC
GAGCATGGTCAAGATCATCGTGACCGCGACACCGGCCGACACGGCCGCGCTGATGTCGTCGCTCGACATGCTGCTGCAGC
AAAGCGGGACATGA

Upstream 100 bases:

>100_bases
TCTCGCCCATCCGACGGCAGCCCCTTTATCACCCAAATTATTCCCTTATGCTCCTTTATATATGGAACAATAAAGATAAT
TAAGGAATCGTCGATAGCTC

Downstream 100 bases:

>100_bases
GCGCAATCTTCAAGTCATCCCGCCATGCCCGCGCGATTCGCGCCGCGTACGCGGCCGCGCTGTCGCACTGGCCGGCCGGG
CATCGGCGCGTCACCGTGCA

Product: DNA binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MFHTVEDTAARLRVHPKTVLRFIRDGKLRATRVGRAYRILEADLAAFARTEPASPAPRAVRVTSIVDIPDASQSLHQYLS
RSLHALASGRTSYVDPVRIDVTFDPASSMVKIIVTATPADTAALMSSLDMLLQQSGT

Sequences:

>Translated_137_residues
MFHTVEDTAARLRVHPKTVLRFIRDGKLRATRVGRAYRILEADLAAFARTEPASPAPRAVRVTSIVDIPDASQSLHQYLS
RSLHALASGRTSYVDPVRIDVTFDPASSMVKIIVTATPADTAALMSSLDMLLQQSGT
>Mature_137_residues
MFHTVEDTAARLRVHPKTVLRFIRDGKLRATRVGRAYRILEADLAAFARTEPASPAPRAVRVTSIVDIPDASQSLHQYLS
RSLHALASGRTSYVDPVRIDVTFDPASSMVKIIVTATPADTAALMSSLDMLLQQSGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14945; Mature: 14945

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHTVEDTAARLRVHPKTVLRFIRDGKLRATRVGRAYRILEADLAAFARTEPASPAPRAV
CCCCCCCHHHHEEECHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
RVTSIVDIPDASQSLHQYLSRSLHALASGRTSYVDPVRIDVTFDPASSMVKIIVTATPAD
EEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCH
TAALMSSLDMLLQQSGT
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFHTVEDTAARLRVHPKTVLRFIRDGKLRATRVGRAYRILEADLAAFARTEPASPAPRAV
CCCCCCCHHHHEEECHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
RVTSIVDIPDASQSLHQYLSRSLHALASGRTSYVDPVRIDVTFDPASSMVKIIVTATPAD
EEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCH
TAALMSSLDMLLQQSGT
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA