Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is nap [H]

Identifier: 116690442

GI number: 116690442

Start: 2685920

End: 2687146

Strand: Direct

Name: nap [H]

Synonym: Bcen2424_2422

Alternate gene names: 116690442

Gene position: 2685920-2687146 (Clockwise)

Preceding gene: 116690441

Following gene: 116690446

Centisome position: 77.1

GC content: 71.15

Gene sequence:

>1227_bases
ATGAGCGCAATCTTCAAGTCATCCCGCCATGCCCGCGCGATTCGCGCCGCGTACGCGGCCGCGCTGTCGCACTGGCCGGC
CGGGCATCGGCGCGTCACCGTGCAAACGCGTCATGGCGCGACGCACGTCATCGCCTGCGGTCCCGAACACGCGCCGCCGG
TCGTGCTGATCCACGGCGCACAGACGACGGCGGCAAGCTGGCAGCATCACGCGACCGACTGGGCGACGCACTTCCGGCTC
TACGCGATCGACGTGATCGGCGAAGCGGGACCGAGCGCGCCGTCACGCCCGCCGCTCGCGGGCGACGCCCATGCGCAGTG
GCTCGACGACGTGCTCGACGGCCTGCAGGTGTCGCGCGCCGCGTTCGTCGGCATCTCGCTCGGCGCGCGAACGGCGCTCG
ACTTTGCGTTGCGGCGGCCGCCGCGCGTCACCCGGCTCGCGCTGCTCTGCCCGTCCGGCATCGGCAGGCAGAAGCCGTTT
CTGTGGTGGGCGCTGCCGCTGTTGCTGCTCGGCGATGCCGGGCGCGCATGCGTGCGGCGGCGCGTGCTGGGTCGCCTGCC
ACCCGCATCGACGCCGGCCGAACGGGACGCGCTCGCCCTGATGCGCGCCGTCGACCGCGGCTTCCGGCCGCGCATCGAGC
CGATTCCGGTATTCGACGACACCATGCTCCGCACGTTGTCGATGCCCGTGCTGGCGATCGTCGGAGGCCGCGACGTGATG
CTCGATTCCCGCGACACGCAGGATCGCCTGACGCGCCTCGTGCCGCACGCGCAGGTGCGGCTTCTTCCCGAGCAGCCTCA
CTTCATCCGCGGGCAGCGCGACACCGTGCGCACTTTTCTCTCATCGACGGACACGCTCGACATGCCCCATCGAATCGTTC
AGGCCGCCGGCAGCCGCGTGCTGGTCCGCGATCCTTCCGCCGGCCTCGTGCAACGGGAAAGCGACGCGCTCGATCTCGTC
GCGCTCGCGCACGAGCATGAAGCCGACTGGATCGCGGTCGCGGCGGACACGCTGCACGACGACTTCTACCGGCTCGACAG
CGGGCTGGCCGGCGCCGTGCTGCAAAAGCTGACCAACTACGGCGTCCGGCTCGGCGTGGTCGGCGACATCGACCGCCGGC
TCGCGCGCAGCGAAGCGCTGCGCGCGCTCGTTCGCGAGTGCAATCGCGGAAAATCGGTCTGGTTCGTCGCGAGCGAGGAC
GACCTGCTGCGCAGGCTCGGCGCGTAA

Upstream 100 bases:

>100_bases
ATCCCGCCTCGAGCATGGTCAAGATCATCGTGACCGCGACACCGGCCGACACGGCCGCGCTGATGTCGTCGCTCGACATG
CTGCTGCAGCAAAGCGGGAC

Downstream 100 bases:

>100_bases
CGCGCTGCGGGCCGCCCCTGCCTCGCCACAGGCGAAAAAAAGCCCCGAAGGCCGATCGCCGTTCGGGGCTTTGTACGCAG
CGCAGCTGCCGCGCAGCGTC

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSAIFKSSRHARAIRAAYAAALSHWPAGHRRVTVQTRHGATHVIACGPEHAPPVVLIHGAQTTAASWQHHATDWATHFRL
YAIDVIGEAGPSAPSRPPLAGDAHAQWLDDVLDGLQVSRAAFVGISLGARTALDFALRRPPRVTRLALLCPSGIGRQKPF
LWWALPLLLLGDAGRACVRRRVLGRLPPASTPAERDALALMRAVDRGFRPRIEPIPVFDDTMLRTLSMPVLAIVGGRDVM
LDSRDTQDRLTRLVPHAQVRLLPEQPHFIRGQRDTVRTFLSSTDTLDMPHRIVQAAGSRVLVRDPSAGLVQRESDALDLV
ALAHEHEADWIAVAADTLHDDFYRLDSGLAGAVLQKLTNYGVRLGVVGDIDRRLARSEALRALVRECNRGKSVWFVASED
DLLRRLGA

Sequences:

>Translated_408_residues
MSAIFKSSRHARAIRAAYAAALSHWPAGHRRVTVQTRHGATHVIACGPEHAPPVVLIHGAQTTAASWQHHATDWATHFRL
YAIDVIGEAGPSAPSRPPLAGDAHAQWLDDVLDGLQVSRAAFVGISLGARTALDFALRRPPRVTRLALLCPSGIGRQKPF
LWWALPLLLLGDAGRACVRRRVLGRLPPASTPAERDALALMRAVDRGFRPRIEPIPVFDDTMLRTLSMPVLAIVGGRDVM
LDSRDTQDRLTRLVPHAQVRLLPEQPHFIRGQRDTVRTFLSSTDTLDMPHRIVQAAGSRVLVRDPSAGLVQRESDALDLV
ALAHEHEADWIAVAADTLHDDFYRLDSGLAGAVLQKLTNYGVRLGVVGDIDRRLARSEALRALVRECNRGKSVWFVASED
DLLRRLGA
>Mature_407_residues
SAIFKSSRHARAIRAAYAAALSHWPAGHRRVTVQTRHGATHVIACGPEHAPPVVLIHGAQTTAASWQHHATDWATHFRLY
AIDVIGEAGPSAPSRPPLAGDAHAQWLDDVLDGLQVSRAAFVGISLGARTALDFALRRPPRVTRLALLCPSGIGRQKPFL
WWALPLLLLGDAGRACVRRRVLGRLPPASTPAERDALALMRAVDRGFRPRIEPIPVFDDTMLRTLSMPVLAIVGGRDVML
DSRDTQDRLTRLVPHAQVRLLPEQPHFIRGQRDTVRTFLSSTDTLDMPHRIVQAAGSRVLVRDPSAGLVQRESDALDLVA
LAHEHEADWIAVAADTLHDDFYRLDSGLAGAVLQKLTNYGVRLGVVGDIDRRLARSEALRALVRECNRGKSVWFVASEDD
LLRRLGA

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.1 [H]

Molecular weight: Translated: 44773; Mature: 44642

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIFKSSRHARAIRAAYAAALSHWPAGHRRVTVQTRHGATHVIACGPEHAPPVVLIHGA
CCCCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEECC
QTTAASWQHHATDWATHFRLYAIDVIGEAGPSAPSRPPLAGDAHAQWLDDVLDGLQVSRA
CCCHHCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AFVGISLGARTALDFALRRPPRVTRLALLCPSGIGRQKPFLWWALPLLLLGDAGRACVRR
HEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH
RVLGRLPPASTPAERDALALMRAVDRGFRPRIEPIPVFDDTMLRTLSMPVLAIVGGRDVM
HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEE
LDSRDTQDRLTRLVPHAQVRLLPEQPHFIRGQRDTVRTFLSSTDTLDMPHRIVQAAGSRV
ECCCCHHHHHHHHCCCCCEEECCCCCCHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCEE
LVRDPSAGLVQRESDALDLVALAHEHEADWIAVAADTLHDDFYRLDSGLAGAVLQKLTNY
EEECCCCCCEECCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHC
GVRLGVVGDIDRRLARSEALRALVRECNRGKSVWFVASEDDLLRRLGA
CEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCC
>Mature Secondary Structure 
SAIFKSSRHARAIRAAYAAALSHWPAGHRRVTVQTRHGATHVIACGPEHAPPVVLIHGA
CCCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEECC
QTTAASWQHHATDWATHFRLYAIDVIGEAGPSAPSRPPLAGDAHAQWLDDVLDGLQVSRA
CCCHHCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AFVGISLGARTALDFALRRPPRVTRLALLCPSGIGRQKPFLWWALPLLLLGDAGRACVRR
HEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH
RVLGRLPPASTPAERDALALMRAVDRGFRPRIEPIPVFDDTMLRTLSMPVLAIVGGRDVM
HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEE
LDSRDTQDRLTRLVPHAQVRLLPEQPHFIRGQRDTVRTFLSSTDTLDMPHRIVQAAGSRV
ECCCCHHHHHHHHCCCCCEEECCCCCCHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCEE
LVRDPSAGLVQRESDALDLVALAHEHEADWIAVAADTLHDDFYRLDSGLAGAVLQKLTNY
EEECCCCCCEECCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHC
GVRLGVVGDIDRRLARSEALRALVRECNRGKSVWFVASEDDLLRRLGA
CEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]