| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688502
Identifier: 116688502
GI number: 116688502
Start: 533386
End: 534321
Strand: Direct
Name: 116688502
Synonym: Bcen2424_0478
Alternate gene names: NA
Gene position: 533386-534321 (Clockwise)
Preceding gene: 116688501
Following gene: 116688503
Centisome position: 15.31
GC content: 60.58
Gene sequence:
>936_bases ATGAAGAGAGTGCTTATGCCTGATTTCATGCAATACGCTGCACCGAAATTCCACGCGATCGTTCCAGACCGTCACGGCGC ACGCGCAGCTCGCGGACGGTTCCTCGCCGCGTTGCGCGTCGCCGCCGCAGGCTTGCTGTTCGTGTCGATGGCGGCGTGCA GCAAGTCCGATCCGACCTACACCAGCATTTCAACGGAGGCGCTGAACTACCTGCCATACAACCTCGTTCGGTTCACGATT ACCGACCAGTTCGGCAACAAGGCACGCGGTGGTGGCGACCTGGAACCCGGGGCCGGGGAAGGCAGCATCGCCTGCTGTTA CTTGCTGAAGGGCAACGATTTCAAGGTTCAGTGGACGTATTACGATGCGGACGACTGGCGGCCGGGTGAGCAGGTGAAGA AACAGCAAGCGGAGGCGAACGTTTCGTTGCCGCCAACCAAGGAGCCGGATTCGATCGGCTCGCGCATTCTCGAGGTCCAC TTCTACCCCGATCATCATGTCGAACTGGTATTTCCTGGCGAGATGCTGGGCAGTACCAGATTGCCGATCGTGGACGTGTC GCGTGACTTGACGAAACAGTACGGCAAGCGGCTCGACAAGAAGTACGAGGACAATGACGCTCAGTCGCACCGCAGGATTT CGAGAACCGTTGCGGAAGCCTGGATCAAGTACCGCTTCACAGATCGCAGCGACCTCGAGCAATACGCCTATTACGCGCTT CTGGTGAATCCTCGGTTCGACGCGCACCCGGCGGTGCAGAAGCTCATCCAGTCGAGCAAGGGGAAACCGGGCGCATTCGC GAAGGCGGTCGCCGCCCTGTCACCGACCGTTGTGAAGGAGCTTGGGCAGAACCGATTCCAGGCGGTTGCGGTCCCGTCGA TTCCGGCGGGCCTGGTGCCGCCGCCACGTGAGGAGAATAGCCATGGCCGGGGCTAA
Upstream 100 bases:
>100_bases TCTGAGCGAATGCCGCAGAAACCGCTGTTCGACCCGACGAACGAAAATATCAAGCCGGTCGCCGTGCCGGCCGTTCCCGA CGGCTTGCTGCCGCGGCTAT
Downstream 100 bases:
>100_bases CGATCGAAACGCCATTCGACTCGATCCGGACGACGCTACGCCGCAGAGCGTGCGAATGGCAGTCGACAAGATGGCGACCG CCAACTATCCAAAGGGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MKRVLMPDFMQYAAPKFHAIVPDRHGARAARGRFLAALRVAAAGLLFVSMAACSKSDPTYTSISTEALNYLPYNLVRFTI TDQFGNKARGGGDLEPGAGEGSIACCYLLKGNDFKVQWTYYDADDWRPGEQVKKQQAEANVSLPPTKEPDSIGSRILEVH FYPDHHVELVFPGEMLGSTRLPIVDVSRDLTKQYGKRLDKKYEDNDAQSHRRISRTVAEAWIKYRFTDRSDLEQYAYYAL LVNPRFDAHPAVQKLIQSSKGKPGAFAKAVAALSPTVVKELGQNRFQAVAVPSIPAGLVPPPREENSHGRG
Sequences:
>Translated_311_residues MKRVLMPDFMQYAAPKFHAIVPDRHGARAARGRFLAALRVAAAGLLFVSMAACSKSDPTYTSISTEALNYLPYNLVRFTI TDQFGNKARGGGDLEPGAGEGSIACCYLLKGNDFKVQWTYYDADDWRPGEQVKKQQAEANVSLPPTKEPDSIGSRILEVH FYPDHHVELVFPGEMLGSTRLPIVDVSRDLTKQYGKRLDKKYEDNDAQSHRRISRTVAEAWIKYRFTDRSDLEQYAYYAL LVNPRFDAHPAVQKLIQSSKGKPGAFAKAVAALSPTVVKELGQNRFQAVAVPSIPAGLVPPPREENSHGRG >Mature_311_residues MKRVLMPDFMQYAAPKFHAIVPDRHGARAARGRFLAALRVAAAGLLFVSMAACSKSDPTYTSISTEALNYLPYNLVRFTI TDQFGNKARGGGDLEPGAGEGSIACCYLLKGNDFKVQWTYYDADDWRPGEQVKKQQAEANVSLPPTKEPDSIGSRILEVH FYPDHHVELVFPGEMLGSTRLPIVDVSRDLTKQYGKRLDKKYEDNDAQSHRRISRTVAEAWIKYRFTDRSDLEQYAYYAL LVNPRFDAHPAVQKLIQSSKGKPGAFAKAVAALSPTVVKELGQNRFQAVAVPSIPAGLVPPPREENSHGRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34527; Mature: 34527
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVLMPDFMQYAAPKFHAIVPDRHGARAARGRFLAALRVAAAGLLFVSMAACSKSDPTY CCCCCCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE TSISTEALNYLPYNLVRFTITDQFGNKARGGGDLEPGAGEGSIACCYLLKGNDFKVQWTY EEHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEE YDADDWRPGEQVKKQQAEANVSLPPTKEPDSIGSRILEVHFYPDHHVELVFPGEMLGSTR ECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCEEEEEEECCCCCEEEEECHHHHCCCC LPIVDVSRDLTKQYGKRLDKKYEDNDAQSHRRISRTVAEAWIKYRFTDRSDLEQYAYYAL CCEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHEEEEE LVNPRFDAHPAVQKLIQSSKGKPGAFAKAVAALSPTVVKELGQNRFQAVAVPSIPAGLVP EECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHCCCCEEEEECCCCCCCCCC PPREENSHGRG CCCCCCCCCCC >Mature Secondary Structure MKRVLMPDFMQYAAPKFHAIVPDRHGARAARGRFLAALRVAAAGLLFVSMAACSKSDPTY CCCCCCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE TSISTEALNYLPYNLVRFTITDQFGNKARGGGDLEPGAGEGSIACCYLLKGNDFKVQWTY EEHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEE YDADDWRPGEQVKKQQAEANVSLPPTKEPDSIGSRILEVHFYPDHHVELVFPGEMLGSTR ECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCEEEEEEECCCCCEEEEECHHHHCCCC LPIVDVSRDLTKQYGKRLDKKYEDNDAQSHRRISRTVAEAWIKYRFTDRSDLEQYAYYAL CCEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHEEEEE LVNPRFDAHPAVQKLIQSSKGKPGAFAKAVAALSPTVVKELGQNRFQAVAVPSIPAGLVP EECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHCCCCEEEEECCCCCCCCCC PPREENSHGRG CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA