| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625909
Identifier: 116625909
GI number: 116625909
Start: 8618533
End: 8619450
Strand: Reverse
Name: 116625909
Synonym: Acid_6865
Alternate gene names: NA
Gene position: 8619450-8618533 (Counterclockwise)
Preceding gene: 116625910
Following gene: 116625908
Centisome position: 86.49
GC content: 61.98
Gene sequence:
>918_bases GTGAGTTTCCTCAACGGCAGTATACATCGCCATCAGCCGCAAGCCGAAAGGGAAACTGCGGCTCTGGCCGGGCCCTTGGG TAGTTTCGAGTACTTTGGTTCAAGCCGCGTTGGCTCCGATCTGACTTCCGCCGACCATGACGCCTTGGAGTTGCGTTGGA TCGATCCGGAGATGGCCCTGCGCGCCGGACTCCGCCGGGTGGACTCGCTCACTGGCAGCGAAATCGTCGGCAGCCGGGGC GGCGGGGATTACTCTGGCATTCTCATTCCCTATTTCCACCCCGACTCCGATCAGGTGCGCGATTACCGCCTTCGCCGCGA TCGTCCGGACCTGGAATACGATGCCGCCGGTAGCCTCAAGGCCAAGCGGAAATACCTCAGCCCTCCGGGCCGATCCAACA TGCTTTATCTCCCGCCCCGAGTCAGTCAATCGCTTCTCGGCGATCCGAAGCTACCAGTCGTGATCACGGAAGGAGAGTTC AAGACCCTCGCCCTGTGGCGCGCCGCCCACCATCGGGCTTTGAGTCGGCCTCGGTTTCTGCCGTTGGGCGTATCCGGTGT CTACAACTGGCGGGGAACGATAGGCAAAGCGAACGCTTCCGACGGCAGCCGCATGGATGTAAAGGGAGCGATTCACGACC TCGATTGGATCGTCTGGGCTGGGCGCCCGGTTGTGATCGCCTATGATGCCGATGCGGTCACCAAAGAACTGGTCCGCGTC GCGCGGTCAGCACTGGCAGCCCATCTGCGCGGCCGCGGCGCCCTCGTAGGCTTCCTGGAAGGGATATCGAAAGGGGCAAG GGGATCGACGACCATCTTGCAGCCGTGGGTCCCGACATGGTGCTCGACGAGATTGCACATGTCGATTTCGCGGGCTCGGT ATGGAAGAAGGACTTACTGCGCTCCAAGCCGCCCATGA
Upstream 100 bases:
>100_bases GAGGCGGGTGTGCAGCGGAGACGCTCGGCACATTGGCCGCGCAGAGGGGTCATCCAAAAGTGATGGAAGGCCGGAGGCCA TCGTTTCAGAGGGGCGCAAT
Downstream 100 bases:
>100_bases ACACTACGGAGGGTCGTATCTTGCCAGTCTTAGCAAATGCCATTGCCGCCTTCCGGCACGCGCCGGAATGGGGTGGAGTA CTCGCCTTCAACGAGTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSFLNGSIHRHQPQAERETAALAGPLGSFEYFGSSRVGSDLTSADHDALELRWIDPEMALRAGLRRVDSLTGSEIVGSRG GGDYSGILIPYFHPDSDQVRDYRLRRDRPDLEYDAAGSLKAKRKYLSPPGRSNMLYLPPRVSQSLLGDPKLPVVITEGEF KTLALWRAAHHRALSRPRFLPLGVSGVYNWRGTIGKANASDGSRMDVKGAIHDLDWIVWAGRPVVIAYDADAVTKELVRV ARSALAAHLRGRGALVGFLEGISKGARGSTTILQPWVPTWCSTRLHMSISRARYGRRTYCAPSRP
Sequences:
>Translated_305_residues MSFLNGSIHRHQPQAERETAALAGPLGSFEYFGSSRVGSDLTSADHDALELRWIDPEMALRAGLRRVDSLTGSEIVGSRG GGDYSGILIPYFHPDSDQVRDYRLRRDRPDLEYDAAGSLKAKRKYLSPPGRSNMLYLPPRVSQSLLGDPKLPVVITEGEF KTLALWRAAHHRALSRPRFLPLGVSGVYNWRGTIGKANASDGSRMDVKGAIHDLDWIVWAGRPVVIAYDADAVTKELVRV ARSALAAHLRGRGALVGFLEGISKGARGSTTILQPWVPTWCSTRLHMSISRARYGRRTYCAPSRP >Mature_304_residues SFLNGSIHRHQPQAERETAALAGPLGSFEYFGSSRVGSDLTSADHDALELRWIDPEMALRAGLRRVDSLTGSEIVGSRGG GDYSGILIPYFHPDSDQVRDYRLRRDRPDLEYDAAGSLKAKRKYLSPPGRSNMLYLPPRVSQSLLGDPKLPVVITEGEFK TLALWRAAHHRALSRPRFLPLGVSGVYNWRGTIGKANASDGSRMDVKGAIHDLDWIVWAGRPVVIAYDADAVTKELVRVA RSALAAHLRGRGALVGFLEGISKGARGSTTILQPWVPTWCSTRLHMSISRARYGRRTYCAPSRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33629; Mature: 33497
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLNGSIHRHQPQAERETAALAGPLGSFEYFGSSRVGSDLTSADHDALELRWIDPEMAL CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCEEEEEEECHHHHH RAGLRRVDSLTGSEIVGSRGGGDYSGILIPYFHPDSDQVRDYRLRRDRPDLEYDAAGSLK HHHHHHHHHCCCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHH AKRKYLSPPGRSNMLYLPPRVSQSLLGDPKLPVVITEGEFKTLALWRAAHHRALSRPRFL HHHHHCCCCCCCCEEEECCHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEE PLGVSGVYNWRGTIGKANASDGSRMDVKGAIHDLDWIVWAGRPVVIAYDADAVTKELVRV EECCCEEEECCCCCCCCCCCCCCEEEHHHHHHHCEEEEECCCEEEEEECCHHHHHHHHHH ARSALAAHLRGRGALVGFLEGISKGARGSTTILQPWVPTWCSTRLHMSISRARYGRRTYC HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCHHCHHHHEEHHHHHCCCCCCC APSRP CCCCC >Mature Secondary Structure SFLNGSIHRHQPQAERETAALAGPLGSFEYFGSSRVGSDLTSADHDALELRWIDPEMAL CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCEEEEEEECHHHHH RAGLRRVDSLTGSEIVGSRGGGDYSGILIPYFHPDSDQVRDYRLRRDRPDLEYDAAGSLK HHHHHHHHHCCCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHH AKRKYLSPPGRSNMLYLPPRVSQSLLGDPKLPVVITEGEFKTLALWRAAHHRALSRPRFL HHHHHCCCCCCCCEEEECCHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEE PLGVSGVYNWRGTIGKANASDGSRMDVKGAIHDLDWIVWAGRPVVIAYDADAVTKELVRV EECCCEEEECCCCCCCCCCCCCCEEEHHHHHHHCEEEEECCCEEEEEECCHHHHHHHHHH ARSALAAHLRGRGALVGFLEGISKGARGSTTILQPWVPTWCSTRLHMSISRARYGRRTYC HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCHHCHHHHEEHHHHHCCCCCCC APSRP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA