Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116623180

Identifier: 116623180

GI number: 116623180

Start: 5195271

End: 5195804

Strand: Direct

Name: 116623180

Synonym: Acid_4087

Alternate gene names: NA

Gene position: 5195271-5195804 (Clockwise)

Preceding gene: 116623179

Following gene: 116623181

Centisome position: 52.13

GC content: 54.31

Gene sequence:

>534_bases
ATGAAAATTGGAATCTGTGTGCTGGCAATGACGGCACTGGCTGGGACCATTCCTGGCGCCGAAGTGCAGTATTGGATCGC
GCCGTGCGCGAATTCTGCAGAAACAGGTTGCAAGAGCGGAGATGCGGAGCTGGCGCAGTGGGCGATGGAGGCGTGGCAGG
CGGCGTCCGAGGGTAAGTTGAAAGTATCGCGAATATCGGATAAAGAACGGGCGGCAATTCGAATCTACTGGGCTACGGGG
CGAGACGGCTTATATGGGGAAACACGCGGGGGAGATGTGTATGTTCGCCCCGATCCGGGACAGGGATTGACACGGGAGGC
GGTAACCTACCTGACCTGTGTTCATGAGACGGGGCATGCGTTGGGATTGGCGCACACTGCAAACTTTGACGACATAATGT
ACAACTTTCAATACGGTGGAGATATCTCGGAATATTTTGGACGGTACGTACGCAAGTTAGAGCGGCGGGAAGATATCCGG
CGGTACTCAGGTATTTCCCCTAATGATCGAAAAAGATTAGCTGCCGGACTGTAA

Upstream 100 bases:

>100_bases
GTGGTGGCGGTTGGGATTCCTGATATCCGTGGTAAATCTGGTGATCTGGCTGGGGATCGGGTCGCTGTGGTGGAAGCTGG
TGGGGATCTGGTAAGAGTCT

Downstream 100 bases:

>100_bases
GCCGGTTCCTGTACCCTTGCGGGCGGTAGTCATTCCTCTGGACCGGCCATTACTGACCGGTTCTAGCGACCTACCCGGAA
GTCAAGCGGGACGGGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKIGICVLAMTALAGTIPGAEVQYWIAPCANSAETGCKSGDAELAQWAMEAWQAASEGKLKVSRISDKERAAIRIYWATG
RDGLYGETRGGDVYVRPDPGQGLTREAVTYLTCVHETGHALGLAHTANFDDIMYNFQYGGDISEYFGRYVRKLERREDIR
RYSGISPNDRKRLAAGL

Sequences:

>Translated_177_residues
MKIGICVLAMTALAGTIPGAEVQYWIAPCANSAETGCKSGDAELAQWAMEAWQAASEGKLKVSRISDKERAAIRIYWATG
RDGLYGETRGGDVYVRPDPGQGLTREAVTYLTCVHETGHALGLAHTANFDDIMYNFQYGGDISEYFGRYVRKLERREDIR
RYSGISPNDRKRLAAGL
>Mature_177_residues
MKIGICVLAMTALAGTIPGAEVQYWIAPCANSAETGCKSGDAELAQWAMEAWQAASEGKLKVSRISDKERAAIRIYWATG
RDGLYGETRGGDVYVRPDPGQGLTREAVTYLTCVHETGHALGLAHTANFDDIMYNFQYGGDISEYFGRYVRKLERREDIR
RYSGISPNDRKRLAAGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19516; Mature: 19516

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGICVLAMTALAGTIPGAEVQYWIAPCANSAETGCKSGDAELAQWAMEAWQAASEGKL
CCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE
KVSRISDKERAAIRIYWATGRDGLYGETRGGDVYVRPDPGQGLTREAVTYLTCVHETGHA
EEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCE
LGLAHTANFDDIMYNFQYGGDISEYFGRYVRKLERREDIRRYSGISPNDRKRLAAGL
EEEEECCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC
>Mature Secondary Structure
MKIGICVLAMTALAGTIPGAEVQYWIAPCANSAETGCKSGDAELAQWAMEAWQAASEGKL
CCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE
KVSRISDKERAAIRIYWATGRDGLYGETRGGDVYVRPDPGQGLTREAVTYLTCVHETGHA
EEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCE
LGLAHTANFDDIMYNFQYGGDISEYFGRYVRKLERREDIRRYSGISPNDRKRLAAGL
EEEEECCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA