| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621554
Identifier: 116621554
GI number: 116621554
Start: 3099028
End: 3099777
Strand: Direct
Name: 116621554
Synonym: Acid_2436
Alternate gene names: NA
Gene position: 3099028-3099777 (Clockwise)
Preceding gene: 116621548
Following gene: 116621558
Centisome position: 31.1
GC content: 67.07
Gene sequence:
>750_bases ATGCACAAATTGTCATCCACGGCTCCAATCTGGATCGCGCCAATCATGCTGCTCGCCGGTTGTTCGAAGTCCCCTGTTGC CACTGCCTCGTCCAGCCCGGTAGGTTATGCCCAGCCTGCGTCCGCTGCGTCGCCCGCTCCGCCGGCCTCTGCGCCGGCTA CATCGCCTGCTCCCGCGTCGCCGGCCGCCGACCCTGCGGAGCCTGTCGCCCCGCCTCCCGCCGAGACGGCCGAGGTTCGC CCCGTGGCCGTCATTCCCAGCGGCACGCCGCTGCACGTAAGGATCGATGAATCCATCGATACACGCCGCAATCGCGCCGG CGACGGCTTCTCCGCGACGTTATCTCAGCCCGTGGAACACAATGGAAGAGTGCTGATTCCCGCCGGCACCGTGTTTCGCG GCCATGTGACTTCGGCGAGCGCCTCCGGGCGTCTGAAGGGCAGGGCACAGCTTGGCATCGCGCTCGATAGTTTCCGGCTG AACGGCCGCCAGTACCGCGTCACCACCACCAGCGTGGATCGCGTCAGCGAAGCTCACAAGAAGCGCAACGGATTCCTGAT CGGCGGAGGCGCCGGATTGGGAGCCGCGATCGGCGCGATTGCCGGCGGCGGCAAAGGCGCGCTAATAGGAGCCGGAGCCG GTGCTGGAGCGGGCACCGCGGGTGCTGCCTTCACCGGCAAGAAAGAGGTCGGAATCGGCGCCGAAACGCCGCTGCGCTTC ACCTTGCGCTCGGCCGTGGAACTTCAGTGA
Upstream 100 bases:
>100_bases GGGAGGTTTTTATACAGTTTGCCACCATACGCCGTGTTGTACTTGAACTTACCGATTGGCCCCTGCCTTGCTTCTTAGCT TCAACTGAGAGGAAACATTC
Downstream 100 bases:
>100_bases ATCGTGACCTTCACCGTCTCCGCGGAGGGGCCGGATTCCAGCATGGGATGCGCCTGATAATCACGTAGGGTCTTCAGTGC GCTTTGGTAGGCCGCCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MHKLSSTAPIWIAPIMLLAGCSKSPVATASSSPVGYAQPASAASPAPPASAPATSPAPASPAADPAEPVAPPPAETAEVR PVAVIPSGTPLHVRIDESIDTRRNRAGDGFSATLSQPVEHNGRVLIPAGTVFRGHVTSASASGRLKGRAQLGIALDSFRL NGRQYRVTTTSVDRVSEAHKKRNGFLIGGGAGLGAAIGAIAGGGKGALIGAGAGAGAGTAGAAFTGKKEVGIGAETPLRF TLRSAVELQ
Sequences:
>Translated_249_residues MHKLSSTAPIWIAPIMLLAGCSKSPVATASSSPVGYAQPASAASPAPPASAPATSPAPASPAADPAEPVAPPPAETAEVR PVAVIPSGTPLHVRIDESIDTRRNRAGDGFSATLSQPVEHNGRVLIPAGTVFRGHVTSASASGRLKGRAQLGIALDSFRL NGRQYRVTTTSVDRVSEAHKKRNGFLIGGGAGLGAAIGAIAGGGKGALIGAGAGAGAGTAGAAFTGKKEVGIGAETPLRF TLRSAVELQ >Mature_249_residues MHKLSSTAPIWIAPIMLLAGCSKSPVATASSSPVGYAQPASAASPAPPASAPATSPAPASPAADPAEPVAPPPAETAEVR PVAVIPSGTPLHVRIDESIDTRRNRAGDGFSATLSQPVEHNGRVLIPAGTVFRGHVTSASASGRLKGRAQLGIALDSFRL NGRQYRVTTTSVDRVSEAHKKRNGFLIGGGAGLGAAIGAIAGGGKGALIGAGAGAGAGTAGAAFTGKKEVGIGAETPLRF TLRSAVELQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24685; Mature: 24685
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKLSSTAPIWIAPIMLLAGCSKSPVATASSSPVGYAQPASAASPAPPASAPATSPAPAS CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAADPAEPVAPPPAETAEVRPVAVIPSGTPLHVRIDESIDTRRNRAGDGFSATLSQPVEH CCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHCCCCCCCHHHCCCCCC NGRVLIPAGTVFRGHVTSASASGRLKGRAQLGIALDSFRLNGRQYRVTTTSVDRVSEAHK CCEEEEECCCEEECEECCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEECHHHHHHHHHH KRNGFLIGGGAGLGAAIGAIAGGGKGALIGAGAGAGAGTAGAAFTGKKEVGIGAETPLRF HHCCEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCEE TLRSAVELQ EECHHEECC >Mature Secondary Structure MHKLSSTAPIWIAPIMLLAGCSKSPVATASSSPVGYAQPASAASPAPPASAPATSPAPAS CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAADPAEPVAPPPAETAEVRPVAVIPSGTPLHVRIDESIDTRRNRAGDGFSATLSQPVEH CCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHCCCCCCCHHHCCCCCC NGRVLIPAGTVFRGHVTSASASGRLKGRAQLGIALDSFRLNGRQYRVTTTSVDRVSEAHK CCEEEEECCCEEECEECCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEECHHHHHHHHHH KRNGFLIGGGAGLGAAIGAIAGGGKGALIGAGAGAGAGTAGAAFTGKKEVGIGAETPLRF HHCCEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCEE TLRSAVELQ EECHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA