Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493735

Identifier: 116493735

GI number: 116493735

Start: 161903

End: 162889

Strand: Direct

Name: 116493735

Synonym: LSEI_0163

Alternate gene names: NA

Gene position: 161903-162889 (Clockwise)

Preceding gene: 116493734

Following gene: 116493737

Centisome position: 5.59

GC content: 44.07

Gene sequence:

>987_bases
ATGAAAAGAGAAAACGATTTTGGGCCGGCTATTAAGGACTTTTTCTTTCGGGCCGGTGACTTTAAGGGTGTTAGTTCACG
ACCACAGTATTGGTGGCTTTTCCTTGCCCAATTTTTATTAGGGTTGGCTGCTGGTGTTCTGTTCGGCATTGCGATTCCAT
TTTCTCTCATGGATAGTCATTCGTTAGGCAGCAATATCATGTTCACGCTGACAACGTTGGCATTTTCAATCTTTGGGTAT
CTTGGCTATCCACAATTGAGCTTAACGATTCGCCGTTATCGTGACGCCAAAGTTAGTCCGTGGTGGTATCTGGGTATTAT
TATCATTAGTTTTATTGGCCCGTTACTAGCGGTTAGCGGCATGAGTTGGTGGTTGGCATTGCTGTTTCCTTTAATTGGCG
GCATTGCTAACTTGGTCATTCTATTGTTGCCGAGTCGAGAACAGAAAGTTGTACCGTTTCCGGCTCAACCTAACACGCGC
GGTACGATTGATGTTGGTTTTGGTACAGCAGTTAAGGACTTCTTCATCCGCGGTGGTGACTTTACTGGTGAATCCAGTCG
CAGCCAATATTGGTGGAGTATCCTGTTTGGTATGATTATCATCATCCCTACTTTTTTGTTTATGATCTTCTCAATTATTT
CAATTATTATCGGTGGCGCGGCCATTAGCGGATTTAATAGCCAAAATATTGACCATCTTGTGAATTCGCTTGGGACTGGT
GCAATCATCATCGTTTTCATTCTTTTCGCCATCATTTACGCGTGGTCAATGTTAGCTCTGCCAGCGTTGACAGTTGGTTG
GCGGCGATTCAAAGATGCAGGCGTTAGTCCATGGTGGTTGATTGCTTTCAACGTCGTATCAGCATTTCTATCAACTCTTG
ATCGAAATGCGGGTAATGTGCCGTTAAGCTTAATTGCGTTACTCCTCATCATCGTTCAGATTGTCATTCTTGCTCTGCCA
ACCAAGTTTCGTGACGATGAGGCATAA

Upstream 100 bases:

>100_bases
CCTGTGCATAAAATTCTTAAGTTTATGAAGGTTATAAAGTTTTGGTGAGACGACCGCAAATGGTATACTCGCCTTAACAA
ATACTTGGAGGCGAGGCACG

Downstream 100 bases:

>100_bases
GCACCACTCAATGTATAAAAAAATGCAGCCGCGGCTGCATTTTTTAATGAAGTAAAGGTCTCGTAACGTTGGCTAATAGA
TACCCTTTTCATCCTCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKRENDFGPAIKDFFFRAGDFKGVSSRPQYWWLFLAQFLLGLAAGVLFGIAIPFSLMDSHSLGSNIMFTLTTLAFSIFGY
LGYPQLSLTIRRYRDAKVSPWWYLGIIIISFIGPLLAVSGMSWWLALLFPLIGGIANLVILLLPSREQKVVPFPAQPNTR
GTIDVGFGTAVKDFFIRGGDFTGESSRSQYWWSILFGMIIIIPTFLFMIFSIISIIIGGAAISGFNSQNIDHLVNSLGTG
AIIIVFILFAIIYAWSMLALPALTVGWRRFKDAGVSPWWLIAFNVVSAFLSTLDRNAGNVPLSLIALLLIIVQIVILALP
TKFRDDEA

Sequences:

>Translated_328_residues
MKRENDFGPAIKDFFFRAGDFKGVSSRPQYWWLFLAQFLLGLAAGVLFGIAIPFSLMDSHSLGSNIMFTLTTLAFSIFGY
LGYPQLSLTIRRYRDAKVSPWWYLGIIIISFIGPLLAVSGMSWWLALLFPLIGGIANLVILLLPSREQKVVPFPAQPNTR
GTIDVGFGTAVKDFFIRGGDFTGESSRSQYWWSILFGMIIIIPTFLFMIFSIISIIIGGAAISGFNSQNIDHLVNSLGTG
AIIIVFILFAIIYAWSMLALPALTVGWRRFKDAGVSPWWLIAFNVVSAFLSTLDRNAGNVPLSLIALLLIIVQIVILALP
TKFRDDEA
>Mature_328_residues
MKRENDFGPAIKDFFFRAGDFKGVSSRPQYWWLFLAQFLLGLAAGVLFGIAIPFSLMDSHSLGSNIMFTLTTLAFSIFGY
LGYPQLSLTIRRYRDAKVSPWWYLGIIIISFIGPLLAVSGMSWWLALLFPLIGGIANLVILLLPSREQKVVPFPAQPNTR
GTIDVGFGTAVKDFFIRGGDFTGESSRSQYWWSILFGMIIIIPTFLFMIFSIISIIIGGAAISGFNSQNIDHLVNSLGTG
AIIIVFILFAIIYAWSMLALPALTVGWRRFKDAGVSPWWLIAFNVVSAFLSTLDRNAGNVPLSLIALLLIIVQIVILALP
TKFRDDEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36363; Mature: 36363

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRENDFGPAIKDFFFRAGDFKGVSSRPQYWWLFLAQFLLGLAAGVLFGIAIPFSLMDSH
CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLGSNIMFTLTTLAFSIFGYLGYPQLSLTIRRYRDAKVSPWWYLGIIIISFIGPLLAVSG
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
MSWWLALLFPLIGGIANLVILLLPSREQKVVPFPAQPNTRGTIDVGFGTAVKDFFIRGGD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEECCHHHHHHHHHCCCC
FTGESSRSQYWWSILFGMIIIIPTFLFMIFSIISIIIGGAAISGFNSQNIDHLVNSLGTG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCH
AIIIVFILFAIIYAWSMLALPALTVGWRRFKDAGVSPWWLIAFNVVSAFLSTLDRNAGNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PLSLIALLLIIVQIVILALPTKFRDDEA
CHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKRENDFGPAIKDFFFRAGDFKGVSSRPQYWWLFLAQFLLGLAAGVLFGIAIPFSLMDSH
CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLGSNIMFTLTTLAFSIFGYLGYPQLSLTIRRYRDAKVSPWWYLGIIIISFIGPLLAVSG
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
MSWWLALLFPLIGGIANLVILLLPSREQKVVPFPAQPNTRGTIDVGFGTAVKDFFIRGGD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEECCHHHHHHHHHCCCC
FTGESSRSQYWWSILFGMIIIIPTFLFMIFSIISIIIGGAAISGFNSQNIDHLVNSLGTG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCH
AIIIVFILFAIIYAWSMLALPALTVGWRRFKDAGVSPWWLIAFNVVSAFLSTLDRNAGNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PLSLIALLLIIVQIVILALPTKFRDDEA
CHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA