Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493734

Identifier: 116493734

GI number: 116493734

Start: 160302

End: 161762

Strand: Direct

Name: 116493734

Synonym: LSEI_0162

Alternate gene names: NA

Gene position: 160302-161762 (Clockwise)

Preceding gene: 116493733

Following gene: 116493735

Centisome position: 5.54

GC content: 42.85

Gene sequence:

>1461_bases
GTGAAATTACTTGAACTGATGGAAAAGAACGATCAAAAGAAACTTAAGTTACTGTATTATCTTGATCAGCATCCGAATCG
CAAATTGAAGAACAGCGAGTTGCAAGATAAATTGCAGATTTCATATTATCTTTTTAAACGCCAGACCAAAGAGATTGCTG
AAGATATTGCAGCATTCGACTTGAGTGATTTTTTTGCGATCGAAGTGACGAACACTACCGTTATCTTGCATGAATATCAC
AATACGAATGCATCGGTTTTTTTGGAACATTATCTGAAGCAGTCACTTCAAATTAAGATCTTGATGACGCTGATGCACGA
ACCACCAGCATTTAATTTAACCGAATTTGCCGAGGAACACTTTGGTAGCTATGCCTTTATGTACAAACGGTATACGGCTC
TGCGGGATACGCTCAAAAGTTGGGGCATTGTGCTGAGTAATGATGGCAAGCTGACTGGTGATGAATTGGCGATCAGACTG
CTTCTGACGAAAATCATGGTGGTTGCGCATATTGATGAAACCGGGTTTGATGACAATGTTTGCAGTACGCTGCATGAGCT
TTTGCAGTTGCTGAAGATGACAGAAGCAACGCCGTCAATGAGTCAGCTCATCGAGACTAAAGCGTATTTTTTGATCAGTT
TGGTTAGATTCCAGCAAGGGCATGTCATTGCCACATCACCGGAAATTGTTGATTTGGTGCGCAATATTCGCGAGCGCACG
CTGGAAACCAGAAAACGGGTTATTGCGATTTATCAGGCGCATTTTACCGCAAGCGACCAGACGATTGACAGCGAGTGCGA
TTATTTTGGGACGTTCCTTGCCATTATTGGCATTATTACGTCGGAGGAGATCGTTTTTCCCGATACAATCAAACAGCACG
GCCGGGCTTTCATTCAAGGGTTTGAAGCCAATTTTGATGTACAGTTGACATTGTCTGAGAAGGCCAATATCGAATACGTT
GTCAACAAGTGTTTGATTGATGTGCTGGCCTTGCCGTTTAGGAGTGAATTCTTTGATGATCATATTGAAGTCAGTTACTT
CTTTAGAATGTATCCCGAATTCTTTGACTATTGTCAGCAATTTGTCCAGGCGCGGTCGGTTAAGTTGGATAGGAATCAGT
CGAAGTTTATGTTTTACCATTGTCTGTTGACCTTGGCAGCCAATGTGCCTTTGAACAAGGTGCTGGAGCCACTTTATGTC
TGTGTTGATTTCACGCTGGGCAAGGAGTACAACACCATTATTGAACGCGACATCAAGTACTTTTCAACATTGAACGTCAA
GGTGACCAACGAAGTCCGGCCAGAAACTAAATTGATTATCACGGATTTGGTCAATGCTTATCATGATACGGACATTTCAA
AAGTCATCTGGCTGTCACCGCCGCGACCAGAAGATTGGGAGAATGTCATTGAAGAACTGCTGGATTTGCGGCTAGCCGAT
CGCACGGTGAAAAAGTCATAA

Upstream 100 bases:

>100_bases
CAACGCAACAACAAGCATATTTGGCCAATATTGCTTACCGTTTTGCTGGGAAAACATTGCTGGCACGTACAGGTACGATC
TCAAAAACAAGGTGGATTTT

Downstream 100 bases:

>100_bases
TGAGAGCAGTGTGATCAACCTGTTCAGTGGCATGCCGAAGCCTGTGCATAAAATTCTTAAGTTTATGAAGGTTATAAAGT
TTTGGTGAGACGACCGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MKLLELMEKNDQKKLKLLYYLDQHPNRKLKNSELQDKLQISYYLFKRQTKEIAEDIAAFDLSDFFAIEVTNTTVILHEYH
NTNASVFLEHYLKQSLQIKILMTLMHEPPAFNLTEFAEEHFGSYAFMYKRYTALRDTLKSWGIVLSNDGKLTGDELAIRL
LLTKIMVVAHIDETGFDDNVCSTLHELLQLLKMTEATPSMSQLIETKAYFLISLVRFQQGHVIATSPEIVDLVRNIRERT
LETRKRVIAIYQAHFTASDQTIDSECDYFGTFLAIIGIITSEEIVFPDTIKQHGRAFIQGFEANFDVQLTLSEKANIEYV
VNKCLIDVLALPFRSEFFDDHIEVSYFFRMYPEFFDYCQQFVQARSVKLDRNQSKFMFYHCLLTLAANVPLNKVLEPLYV
CVDFTLGKEYNTIIERDIKYFSTLNVKVTNEVRPETKLIITDLVNAYHDTDISKVIWLSPPRPEDWENVIEELLDLRLAD
RTVKKS

Sequences:

>Translated_486_residues
MKLLELMEKNDQKKLKLLYYLDQHPNRKLKNSELQDKLQISYYLFKRQTKEIAEDIAAFDLSDFFAIEVTNTTVILHEYH
NTNASVFLEHYLKQSLQIKILMTLMHEPPAFNLTEFAEEHFGSYAFMYKRYTALRDTLKSWGIVLSNDGKLTGDELAIRL
LLTKIMVVAHIDETGFDDNVCSTLHELLQLLKMTEATPSMSQLIETKAYFLISLVRFQQGHVIATSPEIVDLVRNIRERT
LETRKRVIAIYQAHFTASDQTIDSECDYFGTFLAIIGIITSEEIVFPDTIKQHGRAFIQGFEANFDVQLTLSEKANIEYV
VNKCLIDVLALPFRSEFFDDHIEVSYFFRMYPEFFDYCQQFVQARSVKLDRNQSKFMFYHCLLTLAANVPLNKVLEPLYV
CVDFTLGKEYNTIIERDIKYFSTLNVKVTNEVRPETKLIITDLVNAYHDTDISKVIWLSPPRPEDWENVIEELLDLRLAD
RTVKKS
>Mature_486_residues
MKLLELMEKNDQKKLKLLYYLDQHPNRKLKNSELQDKLQISYYLFKRQTKEIAEDIAAFDLSDFFAIEVTNTTVILHEYH
NTNASVFLEHYLKQSLQIKILMTLMHEPPAFNLTEFAEEHFGSYAFMYKRYTALRDTLKSWGIVLSNDGKLTGDELAIRL
LLTKIMVVAHIDETGFDDNVCSTLHELLQLLKMTEATPSMSQLIETKAYFLISLVRFQQGHVIATSPEIVDLVRNIRERT
LETRKRVIAIYQAHFTASDQTIDSECDYFGTFLAIIGIITSEEIVFPDTIKQHGRAFIQGFEANFDVQLTLSEKANIEYV
VNKCLIDVLALPFRSEFFDDHIEVSYFFRMYPEFFDYCQQFVQARSVKLDRNQSKFMFYHCLLTLAANVPLNKVLEPLYV
CVDFTLGKEYNTIIERDIKYFSTLNVKVTNEVRPETKLIITDLVNAYHDTDISKVIWLSPPRPEDWENVIEELLDLRLAD
RTVKKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56689; Mature: 56689

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLELMEKNDQKKLKLLYYLDQHPNRKLKNSELQDKLQISYYLFKRQTKEIAEDIAAFD
CCHHHHHCCCCCHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LSDFFAIEVTNTTVILHEYHNTNASVFLEHYLKQSLQIKILMTLMHEPPAFNLTEFAEEH
CCCEEEEEEECEEEEEEEECCCCHHHHHHHHHHHHHHHHHEEHHHCCCCCCCHHHHHHHH
FGSYAFMYKRYTALRDTLKSWGIVLSNDGKLTGDELAIRLLLTKIMVVAHIDETGFDDNV
CCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
CSTLHELLQLLKMTEATPSMSQLIETKAYFLISLVRFQQGHVIATSPEIVDLVRNIRERT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
LETRKRVIAIYQAHFTASDQTIDSECDYFGTFLAIIGIITSEEIVFPDTIKQHGRAFIQG
HHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCHHHHHCCHHHHHH
FEANFDVQLTLSEKANIEYVVNKCLIDVLALPFRSEFFDDHIEVSYFFRMYPEFFDYCQQ
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FVQARSVKLDRNQSKFMFYHCLLTLAANVPLNKVLEPLYVCVDFTLGKEYNTIIERDIKY
HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FSTLNVKVTNEVRPETKLIITDLVNAYHDTDISKVIWLSPPRPEDWENVIEELLDLRLAD
HHEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
RTVKKS
HHHCCC
>Mature Secondary Structure
MKLLELMEKNDQKKLKLLYYLDQHPNRKLKNSELQDKLQISYYLFKRQTKEIAEDIAAFD
CCHHHHHCCCCCHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LSDFFAIEVTNTTVILHEYHNTNASVFLEHYLKQSLQIKILMTLMHEPPAFNLTEFAEEH
CCCEEEEEEECEEEEEEEECCCCHHHHHHHHHHHHHHHHHEEHHHCCCCCCCHHHHHHHH
FGSYAFMYKRYTALRDTLKSWGIVLSNDGKLTGDELAIRLLLTKIMVVAHIDETGFDDNV
CCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
CSTLHELLQLLKMTEATPSMSQLIETKAYFLISLVRFQQGHVIATSPEIVDLVRNIRERT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
LETRKRVIAIYQAHFTASDQTIDSECDYFGTFLAIIGIITSEEIVFPDTIKQHGRAFIQG
HHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCHHHHHCCHHHHHH
FEANFDVQLTLSEKANIEYVVNKCLIDVLALPFRSEFFDDHIEVSYFFRMYPEFFDYCQQ
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FVQARSVKLDRNQSKFMFYHCLLTLAANVPLNKVLEPLYVCVDFTLGKEYNTIIERDIKY
HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FSTLNVKVTNEVRPETKLIITDLVNAYHDTDISKVIWLSPPRPEDWENVIEELLDLRLAD
HHEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
RTVKKS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA