Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493690

Identifier: 116493690

GI number: 116493690

Start: 111985

End: 113148

Strand: Direct

Name: 116493690

Synonym: LSEI_0118

Alternate gene names: NA

Gene position: 111985-113148 (Clockwise)

Preceding gene: 116493689

Following gene: 116493694

Centisome position: 3.87

GC content: 47.51

Gene sequence:

>1164_bases
ATGGATGCCATTTTGATGAGTTTAATGACAGCACTCAATGAACACCTGCTGATCAATGTGTATCAGCGCGATACCGACGA
TTTTTACACCGGATACGTACAGGTGTTAGGTCATGATGCGGTTGTTCTGGGAACCTACAATGATTCAGGGATTGCCGATG
GATGTGCCTTGATCGCATTTTCTGCGATTGATCAGGTTGAATTTGCCGGGGATGATCTGGATAGCATGAATTTTCGAATT
AACTTGGCACAGGCCCAGCATTTTTTGACGCTGCAAGGCCAAGAAAAGCCATTGCAGTTCGATGCAACACAGAACTTGAT
TCAGCAACTGGCGACGCAGGCTAAGGCGAATGGTCAAATGGTCATGGTCGTGGTGGCCGATGATGATGCCTATCTTGAAG
GGCAGGTAACAGCTGTGGCTGAGGATCGCTTTAGTATGGCGATCTTCAACAAATTCAACTACACCGATGTGCGCGCCTTG
CAGGTTGATTTCTCGGATATTTTAGTTATGGAATTCCATGGCCTTGATCTCAAACTGGAAACGGAACTGGTCTGGCAACG
TGATCATCTAAAGCACGTGGCCACCAAGCTGTACCAAAATGACGGTCAACTGGCTGGCGTGTTTCAGAATGCCTTGGCGA
ACAATCGCTTGATTTCAGTCGTACCCAAGGGACCGGAAGACCAGTTCTTTGTGGGTCGCGTCAAAGCGGTCAACGACCGG
GTTGTGGTGTTGAGTCTTAAAGACATGGCCGGCCAGTTTGGTGGCTATATTTTACTGACGTTACCAAGCATCCAAAATGT
AGCGACGGCCTCGGATTATTTGCAAACGATCAGCTTTTACGAAAAATGGGATCAAACCCATCACTTCAGCCAGCAGCCAG
TGTTGAATGCTGATCGTGAGTTCGATCCGAATGATGACTTGATTCGGACCATCATCTCAGAGGCCGCTGGGTTTGAACGG
GTGGTTCGCATTAAAGTAGCTGACAGCGATGAACATTTTCTGGGTTATCCGGAAAATGTCGGTGAAACCGATTTTGACTT
AAACCTAGTCGGACCAGATGATGGCGAAACGGCGCAAATTCGCTATGGTCAGATTCGTGAAATTGCCTTTGGCCACATCT
TTGCGTATTTGCAAGAGGCACAATTGAAAAATGCTGGACGCTAA

Upstream 100 bases:

>100_bases
TTACGAATATTGCCTATAATGGTCCGGATCAATAAACCATTAGCAAGAAAGATTAGAAAGTTATTTTTAGATTTAAGCGC
AAGAAAGTGAGGGATGCCGC

Downstream 100 bases:

>100_bases
TCTGTACTTGGCACATAACAAGTCGAGCCATCGTTACCATCTAGGAATTGGGCTTTATTAGATTTTAAATACTCTGGGAA
AAAATCTGGGCTAGAAGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MDAILMSLMTALNEHLLINVYQRDTDDFYTGYVQVLGHDAVVLGTYNDSGIADGCALIAFSAIDQVEFAGDDLDSMNFRI
NLAQAQHFLTLQGQEKPLQFDATQNLIQQLATQAKANGQMVMVVVADDDAYLEGQVTAVAEDRFSMAIFNKFNYTDVRAL
QVDFSDILVMEFHGLDLKLETELVWQRDHLKHVATKLYQNDGQLAGVFQNALANNRLISVVPKGPEDQFFVGRVKAVNDR
VVVLSLKDMAGQFGGYILLTLPSIQNVATASDYLQTISFYEKWDQTHHFSQQPVLNADREFDPNDDLIRTIISEAAGFER
VVRIKVADSDEHFLGYPENVGETDFDLNLVGPDDGETAQIRYGQIREIAFGHIFAYLQEAQLKNAGR

Sequences:

>Translated_387_residues
MDAILMSLMTALNEHLLINVYQRDTDDFYTGYVQVLGHDAVVLGTYNDSGIADGCALIAFSAIDQVEFAGDDLDSMNFRI
NLAQAQHFLTLQGQEKPLQFDATQNLIQQLATQAKANGQMVMVVVADDDAYLEGQVTAVAEDRFSMAIFNKFNYTDVRAL
QVDFSDILVMEFHGLDLKLETELVWQRDHLKHVATKLYQNDGQLAGVFQNALANNRLISVVPKGPEDQFFVGRVKAVNDR
VVVLSLKDMAGQFGGYILLTLPSIQNVATASDYLQTISFYEKWDQTHHFSQQPVLNADREFDPNDDLIRTIISEAAGFER
VVRIKVADSDEHFLGYPENVGETDFDLNLVGPDDGETAQIRYGQIREIAFGHIFAYLQEAQLKNAGR
>Mature_387_residues
MDAILMSLMTALNEHLLINVYQRDTDDFYTGYVQVLGHDAVVLGTYNDSGIADGCALIAFSAIDQVEFAGDDLDSMNFRI
NLAQAQHFLTLQGQEKPLQFDATQNLIQQLATQAKANGQMVMVVVADDDAYLEGQVTAVAEDRFSMAIFNKFNYTDVRAL
QVDFSDILVMEFHGLDLKLETELVWQRDHLKHVATKLYQNDGQLAGVFQNALANNRLISVVPKGPEDQFFVGRVKAVNDR
VVVLSLKDMAGQFGGYILLTLPSIQNVATASDYLQTISFYEKWDQTHHFSQQPVLNADREFDPNDDLIRTIISEAAGFER
VVRIKVADSDEHFLGYPENVGETDFDLNLVGPDDGETAQIRYGQIREIAFGHIFAYLQEAQLKNAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43317; Mature: 43317

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAILMSLMTALNEHLLINVYQRDTDDFYTGYVQVLGHDAVVLGTYNDSGIADGCALIAF
CHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHEEECCCEEEEEECCCCCCCCHHHHHHH
SAIDQVEFAGDDLDSMNFRINLAQAQHFLTLQGQEKPLQFDATQNLIQQLATQAKANGQM
HHHHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCCCEEECHHHHHHHHHHHHHCCCCCE
VMVVVADDDAYLEGQVTAVAEDRFSMAIFNKFNYTDVRALQVDFSDILVMEFHGLDLKLE
EEEEEECCCCEECCEEEEEECCCEEEEEEECCCCCEEEEEEECCCEEEEEEECCCCEEEE
TELVWQRDHLKHVATKLYQNDGQLAGVFQNALANNRLISVVPKGPEDQFFVGRVKAVNDR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCE
VVVLSLKDMAGQFGGYILLTLPSIQNVATASDYLQTISFYEKWDQTHHFSQQPVLNADRE
EEEEEEHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
FDPNDDLIRTIISEAAGFERVVRIKVADSDEHFLGYPENVGETDFDLNLVGPDDGETAQI
CCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCEECCCCCCCCCCCEEEEECCCCCCEEEE
RYGQIREIAFGHIFAYLQEAQLKNAGR
ECCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDAILMSLMTALNEHLLINVYQRDTDDFYTGYVQVLGHDAVVLGTYNDSGIADGCALIAF
CHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHEEECCCEEEEEECCCCCCCCHHHHHHH
SAIDQVEFAGDDLDSMNFRINLAQAQHFLTLQGQEKPLQFDATQNLIQQLATQAKANGQM
HHHHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCCCEEECHHHHHHHHHHHHHCCCCCE
VMVVVADDDAYLEGQVTAVAEDRFSMAIFNKFNYTDVRALQVDFSDILVMEFHGLDLKLE
EEEEEECCCCEECCEEEEEECCCEEEEEEECCCCCEEEEEEECCCEEEEEEECCCCEEEE
TELVWQRDHLKHVATKLYQNDGQLAGVFQNALANNRLISVVPKGPEDQFFVGRVKAVNDR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCE
VVVLSLKDMAGQFGGYILLTLPSIQNVATASDYLQTISFYEKWDQTHHFSQQPVLNADRE
EEEEEEHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
FDPNDDLIRTIISEAAGFERVVRIKVADSDEHFLGYPENVGETDFDLNLVGPDDGETAQI
CCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCEECCCCCCCCCCCEEEEECCCCCCEEEE
RYGQIREIAFGHIFAYLQEAQLKNAGR
ECCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA