Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116493467

Identifier: 116493467

GI number: 116493467

Start: 1714640

End: 1715368

Strand: Direct

Name: 116493467

Synonym: PEPE_1739

Alternate gene names: NA

Gene position: 1714640-1715368 (Clockwise)

Preceding gene: 116493466

Following gene: 116493469

Centisome position: 93.57

GC content: 42.25

Gene sequence:

>729_bases
TTGAAAACTGCTGACGTCAAAAGACGTTTCTTTTGGCTTGTCATATCTATTATTTTAAATTCGGCGGCCAACGCTTTATC
CATTGCTACGGGTTTAGGTAGCGCCGTCTGGACGGGTTCTGCAGTGAATCTCTCACATTGGGTAGCTCATACCACCAGCC
CTGCAATTGCTAATCACGTGATGGGAACGGTTTTAGTTTTATACGGAGTTTCAGTAGCTTTTTTGACCATGCTTTTATCG
CGCCATTTGGATTGGGCTCGTTTTGCCCGCAACATTTTATTTGTTGTACCGTTTAGTTATCTCGTCCAATGGTTCACCCC
TTTTTGGAGTGATACTTTAAAAATCAGCCAGTTGCAAGCTAATTTTCAACATCCTTGGCAGCTTTTAACTTCTGTTATTC
TGGATATTATTGGTTTATTGGGCGTGGCTGTAGCTGTTTCACTCTATCAACGGGCGAATTTGATTATGCATCCCAACGAT
GATCTTTCCTACATTCTACGTTTTAGATATCTTCACGGTTTAGCCTCAGTTTCACAATGGGCTAGTTATGTCCCACCACT
TATCATCACCGCTCTTAGCTGCTTTGCTAACGGCGGCCGATTATGGTCATTTGGTTTCGGAACTGTTTGGGCCTTTATTA
CCCAAGGTTACGTTCAAGGTTGGTCCGATCAACACGTAGTTCCAACCTTTAGACATCATTTTTCATTTCAAAGTCCAAAA
AAGCTTTGA

Upstream 100 bases:

>100_bases
GTTAGCTTTAGTATTTATTCAACCTATCGGACCTTGGCTTTACTTCTGGTTAGGACAAGCTAAAACGGATTAATCGGTCC
TAGGAAGAAGATGAATTTTT

Downstream 100 bases:

>100_bases
TAAAAGGGCGCATTCCATCGTGAATGCTAACAACCTTTTACCAAAGCTTTTTTATTTATTCAATGTTTTAATGATTTTTT
TAGCAACAATTGTTGCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Amino Acid Transporter; Fructose Permease

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKTADVKRRFFWLVISIILNSAANALSIATGLGSAVWTGSAVNLSHWVAHTTSPAIANHVMGTVLVLYGVSVAFLTMLLS
RHLDWARFARNILFVVPFSYLVQWFTPFWSDTLKISQLQANFQHPWQLLTSVILDIIGLLGVAVAVSLYQRANLIMHPND
DLSYILRFRYLHGLASVSQWASYVPPLIITALSCFANGGRLWSFGFGTVWAFITQGYVQGWSDQHVVPTFRHHFSFQSPK
KL

Sequences:

>Translated_242_residues
MKTADVKRRFFWLVISIILNSAANALSIATGLGSAVWTGSAVNLSHWVAHTTSPAIANHVMGTVLVLYGVSVAFLTMLLS
RHLDWARFARNILFVVPFSYLVQWFTPFWSDTLKISQLQANFQHPWQLLTSVILDIIGLLGVAVAVSLYQRANLIMHPND
DLSYILRFRYLHGLASVSQWASYVPPLIITALSCFANGGRLWSFGFGTVWAFITQGYVQGWSDQHVVPTFRHHFSFQSPK
KL
>Mature_242_residues
MKTADVKRRFFWLVISIILNSAANALSIATGLGSAVWTGSAVNLSHWVAHTTSPAIANHVMGTVLVLYGVSVAFLTMLLS
RHLDWARFARNILFVVPFSYLVQWFTPFWSDTLKISQLQANFQHPWQLLTSVILDIIGLLGVAVAVSLYQRANLIMHPND
DLSYILRFRYLHGLASVSQWASYVPPLIITALSCFANGGRLWSFGFGTVWAFITQGYVQGWSDQHVVPTFRHHFSFQSPK
KL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27182; Mature: 27182

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTADVKRRFFWLVISIILNSAANALSIATGLGSAVWTGSAVNLSHWVAHTTSPAIANHV
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCCHHHHHHH
MGTVLVLYGVSVAFLTMLLSRHLDWARFARNILFVVPFSYLVQWFTPFWSDTLKISQLQA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFQHPWQLLTSVILDIIGLLGVAVAVSLYQRANLIMHPNDDLSYILRFRYLHGLASVSQW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHH
ASYVPPLIITALSCFANGGRLWSFGFGTVWAFITQGYVQGWSDQHVVPTFRHHFSFQSPK
HHHCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC
KL
CC
>Mature Secondary Structure
MKTADVKRRFFWLVISIILNSAANALSIATGLGSAVWTGSAVNLSHWVAHTTSPAIANHV
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCCHHHHHHH
MGTVLVLYGVSVAFLTMLLSRHLDWARFARNILFVVPFSYLVQWFTPFWSDTLKISQLQA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFQHPWQLLTSVILDIIGLLGVAVAVSLYQRANLIMHPNDDLSYILRFRYLHGLASVSQW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHH
ASYVPPLIITALSCFANGGRLWSFGFGTVWAFITQGYVQGWSDQHVVPTFRHHFSFQSPK
HHHCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC
KL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA