Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is yerH [H]

Identifier: 116493116

GI number: 116493116

Start: 1358809

End: 1359966

Strand: Reverse

Name: yerH [H]

Synonym: PEPE_1371

Alternate gene names: 116493116

Gene position: 1359966-1358809 (Counterclockwise)

Preceding gene: 116493117

Following gene: 116493115

Centisome position: 74.22

GC content: 36.61

Gene sequence:

>1158_bases
ATGAATGTAACTAAAAAATTGAGTTTATTAGTTGCCACATTAGTTATGGGCGTGGGACTGACTGCCTGCGGAAGTTTAGA
TAATTCATCAATGCAATCTTCTACCAATAATGTGACCGGAAAAAAGAACAAAAAAAATAATTACCAAACAACAGGATCAG
CTTCAGGCTCGTATGCTGGGGTGATTAAAAATGGAAAATACGTGACAAGCAAGTCACGGGGATTAACTGCCGATCAAAAT
GGTAATGTTAATAACACCAAGAGTTTCGAGAGTGGATTACAAGACATTTCCAAAAAGATTTTTCCAACCTCTCAATATGT
TTTCCAAGAAGGTCAATATCTGAGTTCAGATACTGTTCAAAATTGGCTTGATCGGGAATCTAAGAGCAATCCGGAAGGGC
TGAACCCTAAGGATAATGGTTCAAAAGACCCAGACAAACGAAACCCAATTTATCTCCAGGCTCTTGAAGAACAGGATTAT
ATGGAAAAATCAGGAACTTCTTTGAAACTCAAAGGGGTTACAATTGGATTAGCGATGAATTCGGTTGATTATTATCAAAA
AGAACAATACGGCGCTCAATATGAGACTAAAATCTCAGATGCAGAGATTAAGGCTAAGAGTCAAGAAATTGCTCAAAAAG
TGCTAGAACGACTTCGCAAGAAATCTGAATTTAAAAATGTTCCAATTGTGATTGCAGTCTATAAACAAGCTTCCAATGAT
AGCCTAGTTGGTGGAACGTTTATGCGTTATTCTAACAATTCCGGTGAAAAGCTTGCAAAATGGAAAGACTTAGACTACAA
GAATGTTGTTTATCCAATTAGTGATACGGAAACCTCACCTAATAGCAATGATTCTAGTGCGTTTGATAACTTTAAGACGC
AAGTAGAAAGCTTCTTCCCTAATTTAAGTGGGATTACTGCAAAAGCAAGATACGACGGTAAATCGATGGAAGGTATGAGT
GTATCAATCACGACTCAATTCTATAGTGAGACTGAGATTAACAGTTTTACTCAATTTGTTTCAACTCAGGCTGAAAAGTA
TCTTCCTAGTGGAGTTAATATTGATATAACAATTAAATCTACCGATGAAGTCCAGAGTTTCCTATCGCGCTCAGCTAAAG
AAAAGACGTTTAGTTCTCATGTCTTTTCAAGTTATTAA

Upstream 100 bases:

>100_bases
CTTTTGCACCAATTAAACGGGTTGTTGAATAAAGAATTTTATACAGGGTTTAGGTTAGCGGTATAATTAGGGATAAATGA
AAGATTGAGGAAACTTTTCT

Downstream 100 bases:

>100_bases
ATCTTAGAAGGAGAAATCAATGACAACTGAAAATAACATTACTAAAAAAGATGTAGAACATGTTGCTACGTTAGCTAAAC
TAAAATTTAATGACGAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MNVTKKLSLLVATLVMGVGLTACGSLDNSSMQSSTNNVTGKKNKKNNYQTTGSASGSYAGVIKNGKYVTSKSRGLTADQN
GNVNNTKSFESGLQDISKKIFPTSQYVFQEGQYLSSDTVQNWLDRESKSNPEGLNPKDNGSKDPDKRNPIYLQALEEQDY
MEKSGTSLKLKGVTIGLAMNSVDYYQKEQYGAQYETKISDAEIKAKSQEIAQKVLERLRKKSEFKNVPIVIAVYKQASND
SLVGGTFMRYSNNSGEKLAKWKDLDYKNVVYPISDTETSPNSNDSSAFDNFKTQVESFFPNLSGITAKARYDGKSMEGMS
VSITTQFYSETEINSFTQFVSTQAEKYLPSGVNIDITIKSTDEVQSFLSRSAKEKTFSSHVFSSY

Sequences:

>Translated_385_residues
MNVTKKLSLLVATLVMGVGLTACGSLDNSSMQSSTNNVTGKKNKKNNYQTTGSASGSYAGVIKNGKYVTSKSRGLTADQN
GNVNNTKSFESGLQDISKKIFPTSQYVFQEGQYLSSDTVQNWLDRESKSNPEGLNPKDNGSKDPDKRNPIYLQALEEQDY
MEKSGTSLKLKGVTIGLAMNSVDYYQKEQYGAQYETKISDAEIKAKSQEIAQKVLERLRKKSEFKNVPIVIAVYKQASND
SLVGGTFMRYSNNSGEKLAKWKDLDYKNVVYPISDTETSPNSNDSSAFDNFKTQVESFFPNLSGITAKARYDGKSMEGMS
VSITTQFYSETEINSFTQFVSTQAEKYLPSGVNIDITIKSTDEVQSFLSRSAKEKTFSSHVFSSY
>Mature_385_residues
MNVTKKLSLLVATLVMGVGLTACGSLDNSSMQSSTNNVTGKKNKKNNYQTTGSASGSYAGVIKNGKYVTSKSRGLTADQN
GNVNNTKSFESGLQDISKKIFPTSQYVFQEGQYLSSDTVQNWLDRESKSNPEGLNPKDNGSKDPDKRNPIYLQALEEQDY
MEKSGTSLKLKGVTIGLAMNSVDYYQKEQYGAQYETKISDAEIKAKSQEIAQKVLERLRKKSEFKNVPIVIAVYKQASND
SLVGGTFMRYSNNSGEKLAKWKDLDYKNVVYPISDTETSPNSNDSSAFDNFKTQVESFFPNLSGITAKARYDGKSMEGMS
VSITTQFYSETEINSFTQFVSTQAEKYLPSGVNIDITIKSTDEVQSFLSRSAKEKTFSSHVFSSY

Specific function: Unknown

COG id: COG4851

COG function: function code R; Protein involved in sex pheromone biosynthesis

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011426 [H]

Pfam domain/function: PF07537 CamS [H]

EC number: NA

Molecular weight: Translated: 42604; Mature: 42604

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTKKLSLLVATLVMGVGLTACGSLDNSSMQSSTNNVTGKKNKKNNYQTTGSASGSYAG
CCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEE
VIKNGKYVTSKSRGLTADQNGNVNNTKSFESGLQDISKKIFPTSQYVFQEGQYLSSDTVQ
EEECCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHH
NWLDRESKSNPEGLNPKDNGSKDPDKRNPIYLQALEEQDYMEKSGTSLKLKGVTIGLAMN
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHCCCEEEEEEEEEEEEEC
SVDYYQKEQYGAQYETKISDAEIKAKSQEIAQKVLERLRKKSEFKNVPIVIAVYKQASND
CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
SLVGGTFMRYSNNSGEKLAKWKDLDYKNVVYPISDTETSPNSNDSSAFDNFKTQVESFFP
CEECCEEEEECCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC
NLSGITAKARYDGKSMEGMSVSITTQFYSETEINSFTQFVSTQAEKYLPSGVNIDITIKS
CCCCCEEEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
TDEVQSFLSRSAKEKTFSSHVFSSY
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVTKKLSLLVATLVMGVGLTACGSLDNSSMQSSTNNVTGKKNKKNNYQTTGSASGSYAG
CCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEE
VIKNGKYVTSKSRGLTADQNGNVNNTKSFESGLQDISKKIFPTSQYVFQEGQYLSSDTVQ
EEECCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHH
NWLDRESKSNPEGLNPKDNGSKDPDKRNPIYLQALEEQDYMEKSGTSLKLKGVTIGLAMN
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHCCCEEEEEEEEEEEEEC
SVDYYQKEQYGAQYETKISDAEIKAKSQEIAQKVLERLRKKSEFKNVPIVIAVYKQASND
CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
SLVGGTFMRYSNNSGEKLAKWKDLDYKNVVYPISDTETSPNSNDSSAFDNFKTQVESFFP
CEECCEEEEECCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC
NLSGITAKARYDGKSMEGMSVSITTQFYSETEINSFTQFVSTQAEKYLPSGVNIDITIKS
CCCCCEEEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
TDEVQSFLSRSAKEKTFSSHVFSSY
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9701819; 9384377 [H]