Click here to switch to the map view.

The map label for this gene is gatC [H]

Identifier: 116493115

GI number: 116493115

Start: 1358475

End: 1358789

Strand: Reverse

Name: gatC [H]

Synonym: PEPE_1370

Alternate gene names: 116493115

Gene position: 1358789-1358475 (Counterclockwise)

Preceding gene: 116493116

Following gene: 116493114

Centisome position: 74.15

GC content: 33.65

Gene sequence:

>315_bases
ATGACAACTGAAAATAACATTACTAAAAAAGATGTAGAACATGTTGCTACGTTAGCTAAACTAAAATTTAATGACGAACA
ACTTGAAAAATTTACGGATCAAATCGAAGATATTATCGATTTAGTGGATACTTTAAATGAGGTTGACACAACCAATGTCG
AACCTACTTTTAATGTTACTGATCAATTAAATCGAATGCGTGAAGATGTAGCTGTTCGTTCGAATGATAAGGAAGCATTA
TTAGCTAATGCCCCTGAAACAGAAAACGGATTTATCCGTGTACCAGCAATTCTTGATGAAAGTGGGGAAGCATAA

Upstream 100 bases:

>100_bases
TCTACCGATGAAGTCCAGAGTTTCCTATCGCGCTCAGCTAAAGAAAAGACGTTTAGTTCTCATGTCTTTTCAAGTTATTA
AATCTTAGAAGGAGAAATCA

Downstream 100 bases:

>100_bases
TGAAGTTTTTTGATATAACAGTAACAGAGCTTCACCAAAAGTTAGTTGATAAAGAATTAACAGTAACTGAATTAGTTTCA
GAAACATTGGATCAAATTGA

Product: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C [H]

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MTTENNITKKDVEHVATLAKLKFNDEQLEKFTDQIEDIIDLVDTLNEVDTTNVEPTFNVTDQLNRMREDVAVRSNDKEAL
LANAPETENGFIRVPAILDESGEA

Sequences:

>Translated_104_residues
MTTENNITKKDVEHVATLAKLKFNDEQLEKFTDQIEDIIDLVDTLNEVDTTNVEPTFNVTDQLNRMREDVAVRSNDKEAL
LANAPETENGFIRVPAILDESGEA
>Mature_103_residues
TTENNITKKDVEHVATLAKLKFNDEQLEKFTDQIEDIIDLVDTLNEVDTTNVEPTFNVTDQLNRMREDVAVRSNDKEALL
ANAPETENGFIRVPAILDESGEA

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: 6.3.5.-

Molecular weight: Translated: 11720; Mature: 11589

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTENNITKKDVEHVATLAKLKFNDEQLEKFTDQIEDIIDLVDTLNEVDTTNVEPTFNVT
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
DQLNRMREDVAVRSNDKEALLANAPETENGFIRVPAILDESGEA
HHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEECEECCCCCCC
>Mature Secondary Structure 
TTENNITKKDVEHVATLAKLKFNDEQLEKFTDQIEDIIDLVDTLNEVDTTNVEPTFNVT
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
DQLNRMREDVAVRSNDKEALLANAPETENGFIRVPAILDESGEA
HHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEECEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA