Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is yegX [C]

Identifier: 116492382

GI number: 116492382

Start: 643413

End: 644186

Strand: Direct

Name: yegX [C]

Synonym: PEPE_0587

Alternate gene names: 116492382

Gene position: 643413-644186 (Clockwise)

Preceding gene: 116492381

Following gene: 116492384

Centisome position: 35.11

GC content: 41.09

Gene sequence:

>774_bases
ATGGAGCGTAAAAGACATGCTAAGTATCGGCCTAAATTTAATATGCGATTTGTTCATCACCGTCGACGAATAATTTTAGG
AGCTTTTCTGCTCGTGGTGCTACTAGCCATGGCTGGCGTCTGGGTAGTTAAAAATCAACAACGCGGAGCACGGTTGGCGC
TAGCGCCGTATCCCGTTCATGGCTGTGTGATTGACCAGGAAAATGGCATTATCGATTTCAATTCCTTACAAAAGCAGCAC
ATTTCATTTGTGTATCTCAATGCGACGACCGGGGCGACTTACTTTGATGATAGTTTTAATACAAATTATAGTCGAATTCA
ATCGACTGATCTTAAAGTTGGTATTGTGCATAACTTTAGTTTCCAAAAGCGTCCCAAAGCCCAACTGCGTTTTATTAGTC
AAAAGGTCAAGAGTAATACGGGACAGCTGCCCGTGGTGATTCGAGTGAGTTACTATGGGGATTATAATGCTAAGCGGGTT
GATTGGAAAAAGGCGGGTCCAAATTTAGCTGACTTGGTTAAATTGCTAGCTAATTACTATGGACAGGCGGTTGTGATTAA
GACGACGCCGGCCATCAAACGACAGCTAGATCCTACTTACATTAAACAAAGTAAGTTTTGGCTAGAAGAACCCCAGATTA
AAAAACACAATTGGCGGGTTCAATTTGTCGAATACGATGCGGAACAAAAATTTAAAAATGATCATAGTGATTTAGAACTT
CCCGTCTCCTATTTTAATGGTTCACAAAAGACTTGGAATGAACAAACCAACTAA

Upstream 100 bases:

>100_bases
TGATCAATTCTACGCTGACTAACTAGTAGTAGGCTACCGAGTTAAACCGATTCGAATATTGGATTAGATTAGAGTACAAT
ATTCAAAAAGGAGGTAGCCC

Downstream 100 bases:

>100_bases
AAAGAGTTGTAGGCAACCGAACGGGGTTACTCACAACTCTTTATTTTTTTTAGATTCAATAATGGCATAGGTTTCGTTAT
TTGCTTCGTCATAAATGCTG

Product: Lyzozyme M1 (1,4-beta-N-acetylmuramidase)

Products: NA

Alternate protein names: Lysozyme; Cell-Wall Lytic; 1 4-Beta-N-Acetylmuramidase; Glycosyl Hydrolase Family; Extracellular Glycosyl Hydrolase; Glycosyl Transferase

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MERKRHAKYRPKFNMRFVHHRRRIILGAFLLVVLLAMAGVWVVKNQQRGARLALAPYPVHGCVIDQENGIIDFNSLQKQH
ISFVYLNATTGATYFDDSFNTNYSRIQSTDLKVGIVHNFSFQKRPKAQLRFISQKVKSNTGQLPVVIRVSYYGDYNAKRV
DWKKAGPNLADLVKLLANYYGQAVVIKTTPAIKRQLDPTYIKQSKFWLEEPQIKKHNWRVQFVEYDAEQKFKNDHSDLEL
PVSYFNGSQKTWNEQTN

Sequences:

>Translated_257_residues
MERKRHAKYRPKFNMRFVHHRRRIILGAFLLVVLLAMAGVWVVKNQQRGARLALAPYPVHGCVIDQENGIIDFNSLQKQH
ISFVYLNATTGATYFDDSFNTNYSRIQSTDLKVGIVHNFSFQKRPKAQLRFISQKVKSNTGQLPVVIRVSYYGDYNAKRV
DWKKAGPNLADLVKLLANYYGQAVVIKTTPAIKRQLDPTYIKQSKFWLEEPQIKKHNWRVQFVEYDAEQKFKNDHSDLEL
PVSYFNGSQKTWNEQTN
>Mature_257_residues
MERKRHAKYRPKFNMRFVHHRRRIILGAFLLVVLLAMAGVWVVKNQQRGARLALAPYPVHGCVIDQENGIIDFNSLQKQH
ISFVYLNATTGATYFDDSFNTNYSRIQSTDLKVGIVHNFSFQKRPKAQLRFISQKVKSNTGQLPVVIRVSYYGDYNAKRV
DWKKAGPNLADLVKLLANYYGQAVVIKTTPAIKRQLDPTYIKQSKFWLEEPQIKKHNWRVQFVEYDAEQKFKNDHSDLEL
PVSYFNGSQKTWNEQTN

Specific function: Unknown

COG id: COG3757

COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29969; Mature: 29969

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKRHAKYRPKFNMRFVHHRRRIILGAFLLVVLLAMAGVWVVKNQQRGARLALAPYPVH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEECCCCCE
GCVIDQENGIIDFNSLQKQHISFVYLNATTGATYFDDSFNTNYSRIQSTDLKVGIVHNFS
EEEEECCCCEEEHHHHHCCCEEEEEEEECCCCEEECCCCCCCHHHEECCCEEEEEEECCC
FQKRPKAQLRFISQKVKSNTGQLPVVIRVSYYGDYNAKRVDWKKAGPNLADLVKLLANYY
CCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEHHHCCCCHHHHHHHHHHHC
GQAVVIKTTPAIKRQLDPTYIKQSKFWLEEPQIKKHNWRVQFVEYDAEQKFKNDHSDLEL
CCEEEEEECHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCHHHHCCCCCCEEE
PVSYFNGSQKTWNEQTN
EHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MERKRHAKYRPKFNMRFVHHRRRIILGAFLLVVLLAMAGVWVVKNQQRGARLALAPYPVH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEECCCCCE
GCVIDQENGIIDFNSLQKQHISFVYLNATTGATYFDDSFNTNYSRIQSTDLKVGIVHNFS
EEEEECCCCEEEHHHHHCCCEEEEEEEECCCCEEECCCCCCCHHHEECCCEEEEEEECCC
FQKRPKAQLRFISQKVKSNTGQLPVVIRVSYYGDYNAKRVDWKKAGPNLADLVKLLANYY
CCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEHHHCCCCHHHHHHHHHHHC
GQAVVIKTTPAIKRQLDPTYIKQSKFWLEEPQIKKHNWRVQFVEYDAEQKFKNDHSDLEL
CCEEEEEECHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCHHHHCCCCCCEEE
PVSYFNGSQKTWNEQTN
EHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA