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The map label for this gene is ygjR [H]

Identifier: 116492384

GI number: 116492384

Start: 644755

End: 645762

Strand: Direct

Name: ygjR [H]

Synonym: PEPE_0589

Alternate gene names: 116492384

Gene position: 644755-645762 (Clockwise)

Preceding gene: 116492382

Following gene: 116492385

Centisome position: 35.19

GC content: 41.57

Gene sequence:

>1008_bases
ATGATTAAATTTGGAATTATTGGTACTAATTGGATTACACAACAATACGTTGACGCTGCTCACGCTACCAACGAATGGAA
GCTAGTTGGGGTATATTCACGGACCATTGAAAAAGCAAAATCATTTGGTGAAAAGAATGGTGCTACTAAGTTCTATGATC
AGATTGAAGACTTAGCTAACGACCCCGAAATTGATGCCGTTTACATTGCTTCGCCAAACAGTTTGCATTTTCAACAAGCC
CAACAAGTCTTGGCAGCGGATAAAGCTGCGGTAGTAGAAAAGCCAATCGTCGCTAATCCGACGGAATGGGAAGAACTCTA
TCAAACTCTAGAAGCCCATCCAAAAGCTCGTTTATTTGAAGCGGCTCGGCACCTACATGAACCTAATTTCCAAGCCATTC
AAAAACAAGTCGGCGAGTTGGAATTAGTCCAAGGGGCTACGTTAACCTATGCTAAATATTCCAGCCGTTATGATAGCTAC
CTCGCTGGCAACGAACCAAACATTTTCTCATTGAAATTTGCTGGTGGAGCTCTCCAGGACTTAGGTGTTTACCTTGCATA
CGATGCAGTAGCTTGGTTTGGGATGCCGGAAGAAGTGGCTTACTTCGCCCAAAAGTTGCGGACAGGAGCTGATGGTAAGG
GCGTTGCCATCCTACGCTATCCCGAATTTGATGTAACTTTAAATATTGGGAAGAACGTTAATTCAGAACTTGCGTCTGAA
ATCTATGGCGTTAAGGACAGTATCGTCATGGATAATGCGGCTGAGCTTAATCAAGTTGAATATATTGACGCTCAAGGTCA
ACGAACGGTGATTAGTGAAACACCAGATGACAATCCAATGATTGCAGAAGCACGTGACTTTGCGCGCGTTATTAATGATC
CGGAAAATGAAAAAAACGCCACCGATTATCAAAATTGGCTAGAAATAAGTCGAAATGTAAATAAACTACTATATAATCTC
CGTCAAAATGGTAAGATATATTTTACCAATGAAAAAGAAGAGGACTAA

Upstream 100 bases:

>100_bases
TTTTTAGGAGTTGTTAATAAAATGAATTAAAGTGAAATAATTCCGTAATACTGTAGTTTTAAGGTAAAATAGAAGTATGA
AATTAAAAGGAGGAACTACC

Downstream 100 bases:

>100_bases
ACATTAATGAATGATTTATTTAAAAAGCATTTTAACGAAAAGGGTTTTGCAGAACCGACTTTGATTCAACAAAAAGTCGC
TGAACCCCTTCGAAATGGGG

Product: dehydrogenase related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MIKFGIIGTNWITQQYVDAAHATNEWKLVGVYSRTIEKAKSFGEKNGATKFYDQIEDLANDPEIDAVYIASPNSLHFQQA
QQVLAADKAAVVEKPIVANPTEWEELYQTLEAHPKARLFEAARHLHEPNFQAIQKQVGELELVQGATLTYAKYSSRYDSY
LAGNEPNIFSLKFAGGALQDLGVYLAYDAVAWFGMPEEVAYFAQKLRTGADGKGVAILRYPEFDVTLNIGKNVNSELASE
IYGVKDSIVMDNAAELNQVEYIDAQGQRTVISETPDDNPMIAEARDFARVINDPENEKNATDYQNWLEISRNVNKLLYNL
RQNGKIYFTNEKEED

Sequences:

>Translated_335_residues
MIKFGIIGTNWITQQYVDAAHATNEWKLVGVYSRTIEKAKSFGEKNGATKFYDQIEDLANDPEIDAVYIASPNSLHFQQA
QQVLAADKAAVVEKPIVANPTEWEELYQTLEAHPKARLFEAARHLHEPNFQAIQKQVGELELVQGATLTYAKYSSRYDSY
LAGNEPNIFSLKFAGGALQDLGVYLAYDAVAWFGMPEEVAYFAQKLRTGADGKGVAILRYPEFDVTLNIGKNVNSELASE
IYGVKDSIVMDNAAELNQVEYIDAQGQRTVISETPDDNPMIAEARDFARVINDPENEKNATDYQNWLEISRNVNKLLYNL
RQNGKIYFTNEKEED
>Mature_335_residues
MIKFGIIGTNWITQQYVDAAHATNEWKLVGVYSRTIEKAKSFGEKNGATKFYDQIEDLANDPEIDAVYIASPNSLHFQQA
QQVLAADKAAVVEKPIVANPTEWEELYQTLEAHPKARLFEAARHLHEPNFQAIQKQVGELELVQGATLTYAKYSSRYDSY
LAGNEPNIFSLKFAGGALQDLGVYLAYDAVAWFGMPEEVAYFAQKLRTGADGKGVAILRYPEFDVTLNIGKNVNSELASE
IYGVKDSIVMDNAAELNQVEYIDAQGQRTVISETPDDNPMIAEARDFARVINDPENEKNATDYQNWLEISRNVNKLLYNL
RQNGKIYFTNEKEED

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=259, Percent_Identity=26.2548262548263, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI145693182, Length=328, Percent_Identity=35.9756097560976, Blast_Score=216, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37696; Mature: 37696

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKFGIIGTNWITQQYVDAAHATNEWKLVGVYSRTIEKAKSFGEKNGATKFYDQIEDLAN
CEEEEEECCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
DPEIDAVYIASPNSLHFQQAQQVLAADKAAVVEKPIVANPTEWEELYQTLEAHPKARLFE
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHH
AARHLHEPNFQAIQKQVGELELVQGATLTYAKYSSRYDSYLAGNEPNIFSLKFAGGALQD
HHHHHCCCCHHHHHHHHCCEEEECCCEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCHHH
LGVYLAYDAVAWFGMPEEVAYFAQKLRTGADGKGVAILRYPEFDVTLNIGKNVNSELASE
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHH
IYGVKDSIVMDNAAELNQVEYIDAQGQRTVISETPDDNPMIAEARDFARVINDPENEKNA
HHCCCHHEEECCCHHHCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCC
TDYQNWLEISRNVNKLLYNLRQNGKIYFTNEKEED
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
>Mature Secondary Structure
MIKFGIIGTNWITQQYVDAAHATNEWKLVGVYSRTIEKAKSFGEKNGATKFYDQIEDLAN
CEEEEEECCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
DPEIDAVYIASPNSLHFQQAQQVLAADKAAVVEKPIVANPTEWEELYQTLEAHPKARLFE
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHH
AARHLHEPNFQAIQKQVGELELVQGATLTYAKYSSRYDSYLAGNEPNIFSLKFAGGALQD
HHHHHCCCCHHHHHHHHCCEEEECCCEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCHHH
LGVYLAYDAVAWFGMPEEVAYFAQKLRTGADGKGVAILRYPEFDVTLNIGKNVNSELASE
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHH
IYGVKDSIVMDNAAELNQVEYIDAQGQRTVISETPDDNPMIAEARDFARVINDPENEKNA
HHCCCHHEEECCCHHHCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCC
TDYQNWLEISRNVNKLLYNLRQNGKIYFTNEKEED
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]