| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is azoR1 [H]
Identifier: 116492381
GI number: 116492381
Start: 642693
End: 643334
Strand: Direct
Name: azoR1 [H]
Synonym: PEPE_0586
Alternate gene names: 116492381
Gene position: 642693-643334 (Clockwise)
Preceding gene: 116492377
Following gene: 116492382
Centisome position: 35.07
GC content: 41.28
Gene sequence:
>642_bases ATGAAAACATTAATTATTAACACCCATCCAGATTTTACTAACGAGGAACATTACTCCATTAAGCTCCAAAAGTTATTTAT GGAGAAATTCCAGGAGAGTTTCCCCGCTGACCAACTAACACTTTTAAACCTTTATGATATCGAGGTCCCTCGCATTGAAA AAGGCCAACTCATGGATGTTTGGCAAAAACAAATCGCGGGAGAACCACTATCAGCTACTGAACAAGCAGTTGCCGATCAA TCAGCGCACTTACTGGCTCAATTTAAGGAACACCATCGGATTGTGATTGTGGCACCGCTCCATAACTTTAACGTCACGTC CCGTATGAAAGACTATATGGATAATATTATGATTGCTCGGGAAACCTTTAAATACACCGAAGACGGATCCGTGGGATTGA TGACCGATGATTATCGGGTGCTCTTACTCCAAGCTAGTGGCTCTATTTATACGAACCACGATCGTTATACACCTTTGGAA TTTTCTCATTTCTATCTCCAAAAAATGTTTGAAGAAATCATGGGCTTTGATCAATTTTCAATTGTGCGGGCCCAAGGAAC GTCCGTCATTACTCCTCAAGCCGTTTGGGCGAATGTTCCAGCTGATATGCAAAAAGCTTTTGATCAATTCTACGCTGACT AA
Upstream 100 bases:
>100_bases TGATTTTTTCAATTGCTAATCTCCTATTTAAAAGGTGCCATGTTTTGGCGCCTTTTTATTATATACTCGGTTTAACGAAG TGAAAAGGGAGATTTTAAAG
Downstream 100 bases:
>100_bases CTAGTAGTAGGCTACCGAGTTAAACCGATTCGAATATTGGATTAGATTAGAGTACAATATTCAAAAAGGAGGTAGCCCAT GGAGCGTAAAAGACATGCTA
Product: Acyl carrier protein phosphodiesterase
Products: 4'- Phosphopantetheine; Apoprotein. [C]
Alternate protein names: Azo-dye reductase 1; FMN-dependent NADH-azo compound oxidoreductase 1 [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKTLIINTHPDFTNEEHYSIKLQKLFMEKFQESFPADQLTLLNLYDIEVPRIEKGQLMDVWQKQIAGEPLSATEQAVADQ SAHLLAQFKEHHRIVIVAPLHNFNVTSRMKDYMDNIMIARETFKYTEDGSVGLMTDDYRVLLLQASGSIYTNHDRYTPLE FSHFYLQKMFEEIMGFDQFSIVRAQGTSVITPQAVWANVPADMQKAFDQFYAD
Sequences:
>Translated_213_residues MKTLIINTHPDFTNEEHYSIKLQKLFMEKFQESFPADQLTLLNLYDIEVPRIEKGQLMDVWQKQIAGEPLSATEQAVADQ SAHLLAQFKEHHRIVIVAPLHNFNVTSRMKDYMDNIMIARETFKYTEDGSVGLMTDDYRVLLLQASGSIYTNHDRYTPLE FSHFYLQKMFEEIMGFDQFSIVRAQGTSVITPQAVWANVPADMQKAFDQFYAD >Mature_213_residues MKTLIINTHPDFTNEEHYSIKLQKLFMEKFQESFPADQLTLLNLYDIEVPRIEKGQLMDVWQKQIAGEPLSATEQAVADQ SAHLLAQFKEHHRIVIVAPLHNFNVTSRMKDYMDNIMIARETFKYTEDGSVGLMTDDYRVLLLQASGSIYTNHDRYTPLE FSHFYLQKMFEEIMGFDQFSIVRAQGTSVITPQAVWANVPADMQKAFDQFYAD
Specific function: Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity [H]
COG id: COG1182
COG function: function code I; Acyl carrier protein phosphodiesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the azoreductase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1787680, Length=192, Percent_Identity=29.6875, Blast_Score=81, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003680 - InterPro: IPR023048 [H]
Pfam domain/function: PF02525 Flavodoxin_2 [H]
EC number: 3.1.4.14 [C]
Molecular weight: Translated: 24725; Mature: 24725
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLIINTHPDFTNEEHYSIKLQKLFMEKFQESFPADQLTLLNLYDIEVPRIEKGQLMDV CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHH WQKQIAGEPLSATEQAVADQSAHLLAQFKEHHRIVIVAPLHNFNVTSRMKDYMDNIMIAR HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHH ETFKYTEDGSVGLMTDDYRVLLLQASGSIYTNHDRYTPLEFSHFYLQKMFEEIMGFDQFS HHHCCCCCCCEEEEECCEEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEE IVRAQGTSVITPQAVWANVPADMQKAFDQFYAD EEEECCCCEECCHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKTLIINTHPDFTNEEHYSIKLQKLFMEKFQESFPADQLTLLNLYDIEVPRIEKGQLMDV CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHH WQKQIAGEPLSATEQAVADQSAHLLAQFKEHHRIVIVAPLHNFNVTSRMKDYMDNIMIAR HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHH ETFKYTEDGSVGLMTDDYRVLLLQASGSIYTNHDRYTPLEFSHFYLQKMFEEIMGFDQFS HHHCCCCCCCEEEEECCEEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEE IVRAQGTSVITPQAVWANVPADMQKAFDQFYAD EEEECCCCEECCHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: [Acyl-Carrier Protein]; H2O [C]
Specific reaction: [Acyl-Carrier Protein] + H2O = 4'- Phosphopantetheine + Apoprotein. [C]
General reaction: Phosphoric ester hydrolysis [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12566566 [H]