Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492282

Identifier: 116492282

GI number: 116492282

Start: 534223

End: 534759

Strand: Reverse

Name: 116492282

Synonym: PEPE_0481

Alternate gene names: NA

Gene position: 534759-534223 (Counterclockwise)

Preceding gene: 116492295

Following gene: 116492274

Centisome position: 29.18

GC content: 33.33

Gene sequence:

>537_bases
ATGCCAAAATCTAAAAAATTTAAACCCCTTAGAATTTTTTCTAAGTCAAACATCGTAATTGTAATTTTAGCGGCCCTTGG
AATTCAGACTTATCCTAACTTAACCAACAACCAAATGGCTAAATCAGATTCCAGTGATTATACCACAGATGATACGTCTG
ATAGTGCAACGGTAATTGAAAATCAAATTGCCAATAATATTAATTCGAGAATTCCTTTTCAGATCAATTTTACGGACAAT
AACATTATTATTAAAGTACCTAAAATCGATATCTTTAGCTTTACCAGAAATTACGTCCCCAATACGTTAGCAGTTCTAAA
AAGTATCAAAAATACCAAGTTACCGACCTCTGCTAAAAATGTTAAGTTTTTAGTGGGCGATGATGCACAAATCTTCTCCG
TCAGCGCCATCAAAAAAGCTAATTTCAGTGCTAAGAAAATTAAAGAATTTGGTACTAGTGGAACGGCGTCGGAGATTACC
GCTAAAACTTACCAAAACTATTATCAACAATATATCGTGCCTAAAATCCTCAAATAA

Upstream 100 bases:

>100_bases
AAATGTTTGTGTATTAATACATTGTTTAATATAATTGTATAAGTAATATATTGTCTATTATTAATGCTTTATTATATAGA
AAATGAAACGGAACAGGAAG

Downstream 100 bases:

>100_bases
AAAGTACCGTAGAAAATTTAAATTTTTCTGCGGTACTTTTATTTATATACTTATTTTTATCTAAACATAGTCTTAGTTGC
TTTTAGCAAGACTTTTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MPKSKKFKPLRIFSKSNIVIVILAALGIQTYPNLTNNQMAKSDSSDYTTDDTSDSATVIENQIANNINSRIPFQINFTDN
NIIIKVPKIDIFSFTRNYVPNTLAVLKSIKNTKLPTSAKNVKFLVGDDAQIFSVSAIKKANFSAKKIKEFGTSGTASEIT
AKTYQNYYQQYIVPKILK

Sequences:

>Translated_178_residues
MPKSKKFKPLRIFSKSNIVIVILAALGIQTYPNLTNNQMAKSDSSDYTTDDTSDSATVIENQIANNINSRIPFQINFTDN
NIIIKVPKIDIFSFTRNYVPNTLAVLKSIKNTKLPTSAKNVKFLVGDDAQIFSVSAIKKANFSAKKIKEFGTSGTASEIT
AKTYQNYYQQYIVPKILK
>Mature_177_residues
PKSKKFKPLRIFSKSNIVIVILAALGIQTYPNLTNNQMAKSDSSDYTTDDTSDSATVIENQIANNINSRIPFQINFTDNN
IIIKVPKIDIFSFTRNYVPNTLAVLKSIKNTKLPTSAKNVKFLVGDDAQIFSVSAIKKANFSAKKIKEFGTSGTASEITA
KTYQNYYQQYIVPKILK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19868; Mature: 19737

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKSKKFKPLRIFSKSNIVIVILAALGIQTYPNLTNNQMAKSDSSDYTTDDTSDSATVIE
CCCCCCCCCEEEECCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
NQIANNINSRIPFQINFTDNNIIIKVPKIDIFSFTRNYVPNTLAVLKSIKNTKLPTSAKN
HHHHHCCCCCCCEEEEEECCEEEEEECCEEEEHHHHHCCCHHHHHHHHHHCCCCCCCCCC
VKFLVGDDAQIFSVSAIKKANFSAKKIKEFGTSGTASEITAKTYQNYYQQYIVPKILK
EEEEECCCCEEEEEEHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKSKKFKPLRIFSKSNIVIVILAALGIQTYPNLTNNQMAKSDSSDYTTDDTSDSATVIE
CCCCCCCCEEEECCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
NQIANNINSRIPFQINFTDNNIIIKVPKIDIFSFTRNYVPNTLAVLKSIKNTKLPTSAKN
HHHHHCCCCCCCEEEEEECCEEEEEECCEEEEHHHHHCCCHHHHHHHHHHCCCCCCCCCC
VKFLVGDDAQIFSVSAIKKANFSAKKIKEFGTSGTASEITAKTYQNYYQQYIVPKILK
EEEEECCCCEEEEEEHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA