| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is yghZ [H]
Identifier: 115352302
GI number: 115352302
Start: 2484463
End: 2485434
Strand: Direct
Name: yghZ [H]
Synonym: Bamb_2251
Alternate gene names: 115352302
Gene position: 2484463-2485434 (Clockwise)
Preceding gene: 115352300
Following gene: 115352303
Centisome position: 69.86
GC content: 65.43
Gene sequence:
>972_bases ATGCACTATCGACGGCTAGGCCGCTCCGGCCTCCAGATCAGCGAGCTTTCGCTCGGCTCGTGGGTCACCTACGGCAACCA GGTCGATCACCGGGCCGCCCGCGAATGCCTCGCGGCGGCCCGCGATGCGGGCGTCAATTTCTTCGACAACGCCGAGGTCT ACGCGGGCGGCAAATCCGAGGAAATCATGGGCCAGGCGCTCAAGTCGCTCGGCTGGCCGCGCATCAGCTATCTCGTGTCG ACGAAGTTCTTCTGGGGGCTCGCGGAAGCGCCGAATCAGTACCACACGCTGAACCGGAAATATCTGCTGAACGCGATCGA CGGCTCGCTGCGCCGGCTGCAGCTCGACTATGTCGACCTCGTCTACTGCCATCGCCCGGATCCGAACACGCCGATCGAGG AAACGGTGTGGGCGATGAGCGACATGATCGTGCGCGGCAAGGCGCTGTACTGGGGCACGTCCGAATGGAGTGCCGACGAG ATCCGCGCGGCGTATGAAATTGCCGAGCGGCACCATCTGCACAAACCGGTCGTCGAGCAGCCGCAGTACAACCTGTTCCA CCGTACCCGGGTCGAACGCGAATACGCGCGGCTCTACGACGACTACGGCCTCGGCCTGACGACCTGGAGCCCGCTTGCAT CGGGGCTGCTCACCGGCAAGTACCGTAATGGCGTACCGCCGGGCAGCCGCGCGGAACTGCAGGGCTACGATTGGCTCCGC GATCGGCTGACGGACCCGACCAGCAACGATGTGGTCGAACGGCTCGGCGGAATCGCGGCCGAACTCGGTTGCAGCACCGC CCAGCTCGCGATCGCGTGGGTACTCGCGAATCCGCGCGTGAGTTCGGTCATTACGGGCGCCTCCCGGATCGAGCAGATCG GCGACAACATGCGCGCGCTCGACGTCGCCGCCAAGCTGACGCCGGAGGTCAGGCAACGCATCGAGGAGGCCGTCGGCGAC GCATACGAGTAA
Upstream 100 bases:
>100_bases CTCGTGCCGGCGGGCCAGCCGCTATTGTGCACGATCGGCCCCGCCGTTCGCGCGCAAAACGTCTAAGCTTAAGGTCGGTT CCGAGTCGCGGGAGATTTTC
Downstream 100 bases:
>100_bases GGCGAGTCACGTCCACTCGCGTACAATACGCGGCCGCAGTGGACGCGGCCCGACGGCCGCGCGCGATCGTCCGTTTTCAT CGATTCATCCTTCGTTTCAG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MHYRRLGRSGLQISELSLGSWVTYGNQVDHRAARECLAAARDAGVNFFDNAEVYAGGKSEEIMGQALKSLGWPRISYLVS TKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDLVYCHRPDPNTPIEETVWAMSDMIVRGKALYWGTSEWSADE IRAAYEIAERHHLHKPVVEQPQYNLFHRTRVEREYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPPGSRAELQGYDWLR DRLTDPTSNDVVERLGGIAAELGCSTAQLAIAWVLANPRVSSVITGASRIEQIGDNMRALDVAAKLTPEVRQRIEEAVGD AYE
Sequences:
>Translated_323_residues MHYRRLGRSGLQISELSLGSWVTYGNQVDHRAARECLAAARDAGVNFFDNAEVYAGGKSEEIMGQALKSLGWPRISYLVS TKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDLVYCHRPDPNTPIEETVWAMSDMIVRGKALYWGTSEWSADE IRAAYEIAERHHLHKPVVEQPQYNLFHRTRVEREYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPPGSRAELQGYDWLR DRLTDPTSNDVVERLGGIAAELGCSTAQLAIAWVLANPRVSSVITGASRIEQIGDNMRALDVAAKLTPEVRQRIEEAVGD AYE >Mature_323_residues MHYRRLGRSGLQISELSLGSWVTYGNQVDHRAARECLAAARDAGVNFFDNAEVYAGGKSEEIMGQALKSLGWPRISYLVS TKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDLVYCHRPDPNTPIEETVWAMSDMIVRGKALYWGTSEWSADE IRAAYEIAERHHLHKPVVEQPQYNLFHRTRVEREYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPPGSRAELQGYDWLR DRLTDPTSNDVVERLGGIAAELGCSTAQLAIAWVLANPRVSSVITGASRIEQIGDNMRALDVAAKLTPEVRQRIEEAVGD AYE
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436969, Length=323, Percent_Identity=45.8204334365325, Blast_Score=308, Evalue=5e-84, Organism=Homo sapiens, GI4504825, Length=321, Percent_Identity=45.7943925233645, Blast_Score=306, Evalue=1e-83, Organism=Homo sapiens, GI27436964, Length=318, Percent_Identity=46.8553459119497, Blast_Score=303, Evalue=1e-82, Organism=Homo sapiens, GI27436962, Length=318, Percent_Identity=46.8553459119497, Blast_Score=302, Evalue=3e-82, Organism=Homo sapiens, GI27436966, Length=318, Percent_Identity=46.5408805031447, Blast_Score=300, Evalue=1e-81, Organism=Homo sapiens, GI27436971, Length=323, Percent_Identity=46.749226006192, Blast_Score=296, Evalue=3e-80, Organism=Homo sapiens, GI41152114, Length=316, Percent_Identity=30.0632911392405, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI223718702, Length=316, Percent_Identity=27.5316455696203, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI41327764, Length=291, Percent_Identity=28.5223367697594, Blast_Score=81, Evalue=1e-15, Organism=Escherichia coli, GI87081735, Length=315, Percent_Identity=36.8253968253968, Blast_Score=182, Evalue=2e-47, Organism=Escherichia coli, GI1789375, Length=326, Percent_Identity=35.8895705521472, Blast_Score=182, Evalue=2e-47, Organism=Escherichia coli, GI1788070, Length=320, Percent_Identity=29.6875, Blast_Score=121, Evalue=6e-29, Organism=Escherichia coli, GI1789199, Length=353, Percent_Identity=30.028328611898, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1788081, Length=303, Percent_Identity=25.7425742574257, Blast_Score=73, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=347, Percent_Identity=27.0893371757925, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6323998, Length=328, Percent_Identity=27.4390243902439, Blast_Score=94, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6319958, Length=304, Percent_Identity=27.6315789473684, Blast_Score=87, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6319951, Length=341, Percent_Identity=26.099706744868, Blast_Score=78, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6322615, Length=226, Percent_Identity=26.9911504424779, Blast_Score=73, Evalue=5e-14, Organism=Drosophila melanogaster, GI24640980, Length=337, Percent_Identity=32.9376854599407, Blast_Score=193, Evalue=1e-49, Organism=Drosophila melanogaster, GI45549126, Length=337, Percent_Identity=32.9376854599407, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24646155, Length=311, Percent_Identity=26.3665594855305, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24646159, Length=237, Percent_Identity=28.6919831223629, Blast_Score=88, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36348; Mature: 36348
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYRRLGRSGLQISELSLGSWVTYGNQVDHRAARECLAAARDAGVNFFDNAEVYAGGKSE CCHHHHCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHH EIMGQALKSLGWPRISYLVSTKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDL HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCHHHHEEECEEEE VYCHRPDPNTPIEETVWAMSDMIVRGKALYWGTSEWSADEIRAAYEIAERHHLHKPVVEQ EEEECCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHCC PQYNLFHRTRVEREYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPPGSRAELQGYDWLR CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH DRLTDPTSNDVVERLGGIAAELGCSTAQLAIAWVLANPRVSSVITGASRIEQIGDNMRAL HHCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCHHHH DVAAKLTPEVRQRIEEAVGDAYE HHHHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MHYRRLGRSGLQISELSLGSWVTYGNQVDHRAARECLAAARDAGVNFFDNAEVYAGGKSE CCHHHHCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHH EIMGQALKSLGWPRISYLVSTKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDL HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCHHHHEEECEEEE VYCHRPDPNTPIEETVWAMSDMIVRGKALYWGTSEWSADEIRAAYEIAERHHLHKPVVEQ EEEECCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHCC PQYNLFHRTRVEREYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPPGSRAELQGYDWLR CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH DRLTDPTSNDVVERLGGIAAELGCSTAQLAIAWVLANPRVSSVITGASRIEQIGDNMRAL HHCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCHHHH DVAAKLTPEVRQRIEEAVGDAYE HHHHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]